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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C1.83.v1.A...' > 
  2. Clone 'ciem810e01' > 
  3. Transcript 'KH2012:KH.C1.83.v1.A...' > 
  4. Transcript 'Harore.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S568.g12596.01.t

Possible name(s)

DEPDC4; DEPDC7

Gene model

Harore.CG.MTP2014.S568.g12596

Location

S568 [23,603 / 35,742]

Sequences

Amino acid sequence

Length: 443

>Harore.CG.MTP2014.S568.g12596.01.p
MLSSIVLQEACNKSKNANNEPFKATNIWKDLVNHLQENAHVKQRRLMMKSHHECFSGSNA
VEILLQYVHDNPAKFPNTSMVSPENIVRLCQTFIDAGVFESVNLGDDPEKYKRFKNSSSS
LYRFISKKKTGNCGSEVLSSTSGSIDLHKFSTLLSLEKTHTYSKQKSEFVHTGSKTIKQK
HRNKPAAETPTSESDTENQPWKKTPLQCRRNSVFSGLVMKRSSSDSNLRKESTTTSSSES
DCNLKIWGHGDSHEKNKSGLSQRQSFRKASLRRSGHSPYRLVQPCIIRNPVIALDRIDVT
PQNDLKRKTCKENSDSMSTNDVSFLHSRKRLKRLNQQGSSDQLMRFTEMHYKDVASSYNS
QDQWIITSLSVMQHIPNSYNILRNMARADEHCKKIELYFAVSDHYNALSRPLIDEHYNSI
AEAIIALLGMLILLNFALINSHR

Nucleotide sequence

Length: 2,614

>Harore.CG.MTP2014.S568.g12596.01.t
CAGAACCTATTTTGCTTTGTTTGTTATGATAGTTCTGTTTATATACCTTAGTACGAAGAA
TTAGCATGCTCTCATCCATTGTTCTTCAAGAAGCTTGCAACAAATCAAAGAATGCAAATA
ATGAGCCTTTCAAGGCAACAAATATATGGAAAGATTTAGTCAATCATCTTCAAGAAAATG
CACATGTGAAACAAAGAAGACTTATGATGAAGTCACATCATGAATGCTTCAGCGGATCCA
ATGCTGTGGAAATACTTCTGCAATATGTTCATGACAATCCAGCTAAATTCCCTAACACTT
CAATGGTGTCACCGGAAAACATTGTGAGATTATGTCAAACTTTCATTGATGCAGGCGTGT
TTGAATCAGTGAATTTAGGAGATGACCCAGAAAAATACAAAAGATTTAAAAATTCCTCAT
CAAGCCTGTATCGATTCATTTCAAAAAAAAAAACTGGTAACTGTGGTAGTGAAGTGTTAT
CCAGTACTTCTGGCAGTATTGATCTTCACAAATTCAGTACTCTATTGAGCCTCGAAAAAA
CTCATACATATTCAAAGCAGAAATCAGAATTTGTGCATACTGGAAGCAAAACTATTAAGC
AAAAACATAGAAATAAACCTGCAGCTGAAACACCTACTAGTGAATCTGATACTGAAAATC
AACCATGGAAAAAAACACCATTGCAGTGTAGGCGGAACTCAGTGTTTTCTGGCTTAGTCA
TGAAAAGGTCATCTTCTGATTCGAATTTGAGAAAAGAATCTACAACGACCTCTTCTTCTG
AATCAGATTGCAACTTAAAAATTTGGGGTCATGGAGACTCGCATGAAAAAAACAAATCGG
GGTTGAGTCAAAGACAATCATTCAGAAAAGCATCGTTGAGACGTTCAGGACACTCTCCGT
ATCGGCTAGTACAACCATGTATTATTCGGAACCCAGTTATTGCATTAGATAGAATTGATG
TGACTCCACAAAATGATTTGAAAAGGAAAACCTGCAAAGAAAATTCAGACAGCATGTCTA
CTAACGATGTTTCATTTCTTCATAGTAGAAAAAGGTTGAAAAGATTGAACCAGCAAGGAT
CTTCAGACCAGTTGATGAGATTTACAGAAATGCATTATAAGGATGTTGCCTCATCATATA
ACAGCCAAGACCAATGGATAATAACATCGCTGAGTGTAATGCAGCATATTCCAAACAGCT
ACAATATTTTGAGAAATATGGCTAGAGCCGATGAACATTGCAAGAAAATTGAGCTTTATT
TTGCGGTATCAGATCATTACAATGCACTCAGTCGCCCACTTATTGATGAGCACTACAATA
GCATAGCAGAAGCAATCATAGCTTTATTAGGCATGTTAATACTTTTAAATTTTGCATTAA
TAAATTCTCATAGATGACCAGTAAATCTGTGGAAAAGATAATGGAAGCGATGCAGCTCTT
TTTAAATCTACTTCCAGATTCGAGACTAACAGAACTACGACATCTATGTTCAGATCTAAT
CAAGCTTTAGTAATTGATTCATTTACACCTGCAATATTGCGCTTGCCTGAACATGCAGCA
CTGGTGAATGGTTTGGATGGCTGTAAAGGAATTGTTCGTTTTGTAATTCTCCATCATCTA
CGTGCTTTCTTGCTTCCAGCTCATATTGAAATGATTGTTCAAAGAAAAATAGACCTGCTT
GAACAAGGAGACATTGATAGCCCAACTCTTCTTCAAGATACTACATTTTGTTCGATGATA
TCGGAGAGTGAGTACGAGGAAGAAAAAGTGAATTATACTCAAGCGCAAATACAGAATCTA
TATCAATATCTCAAGGAGAGTACTAGTATTTCTGCTCGCAGAAAGAAGGATATTCTTAAA
AAGTTTGAGCGAAACCACGCACTCGTATTAAGCACAAATAACAATAGATCAAGGTTCAAC
TCAAAGTGCCATAAAGGAAAATACTACCACTCTTTCCAGTCCTTGGAGGAATATTGCCCA
CAGATTCTTATAATCAACTTACATTGCATTCCGGTGTTTCTGGGAAACCTCCAACAAGTC
CACGAAACAACTTAAACTTGAAACAGAAGTCAAACTGCAGTGACGCAAATTCCAAACTTC
AATACCAGTACTCACCTTCGAGTCGCCCAATGATAATTAAAGCCCCTAATTCCGACCCAC
TTACCAGAAAAAACCCTAAACCTCATAAATGAAGATGATATATCATTTGATACTGGAATA
ATGATTTACTGAAAATGTTTTGTATATAAAATCGGCACGAGCAAAAAAAATGTATCTGAA
TGGGATGACTTTTGGGCTAATGACAGCTAAGTTAGCCCTAAATGCTGGACAATAATGCTT
TAAACTTGGTTGTGCTTTTTTTTAGATTCTCTCCTGAAACATTTATCAGTGTATCTTAGT
AACTAGTTGACAGTTGGCATGAATATTGGTCAACCTTGTGGACAATGTGCATATTGTGTA
TATATATTTTTAATTCACATATGAATTACATAGTGATACAAACATTAAAACTGGAAAAAA
TAATGGGTATTGATGTCCTAATTTTTTGTATCAATGGTCGTTCAATTGAATAGAGATTAA
TATACTGTTATCTGACTTATAAACTAAAATATAT

InterProScan

Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[15-125] 4.3E-27
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[25-150] 1.47E-10
ProSiteProfiles
DEP_dom (IPR000591) - T[35-126] 9.483
SMART
DEP_dom (IPR000591) - T[35-126] 2.3E-7
Pfam
DEP_dom (IPR000591) - T[41-124] 2.5E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value