- Transcript 'KH2012:KH.L84.15.v1....' >
- Transcript 'Harore.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S568.g02404.01.t
Possible name(s)
DEPDC1B; DEPDC4; DEPDC7
Gene model
Location
S568 [769 / 9,798]
Amino acid sequence
Length: 762
>Harore.CG.MTP2014.S568.g02404.01.p
MNSSNVLQEVCNKSENASRRPFKATEIWKDLVNHLQENAHVKRRRIMMKSHHECFSGSNA
VEILLKYVHDNPTKFPNTSIVSHENIVRLCQTFIDAGVFESVNFGDDPKKYKRFENSSSS
LYRFISKKKTVGNCDSEVLPSTSGSIDLLIKFSTLISLKTTDTYSKQKSVFLHTGSKTIR
QKNRNKPAAETPTSESDTENQPLKKTPLQCRRNSVFSGLVMKRSSSDSNLRKESTTTSSS
ESDCNLKIWSPGDMHEKNKSGLSQRLSFRKKSLRRSGHSSYRLVQPCVIQNPVVAKDRFD
ATPKNDLKRKSYKENSEIMSTNKVSFLHNRKKLKKLNQQESSHIKRESVRVRLLQILDLP
FVETFVISPTFDKKIMSIQHGSSDQSIRFTEMHYKDVASSYNSQDQWIFTSLSVMQHIPN
SYNILRNIARADEHCKKIELYFAVSDHYNALSHPLIDEHYNGIAEGIIALLASKSVEKIM
EAMQLFLNLLPDSRLTELRHLCSFLHVVCSQNDPKLVRKRSNQALVIDSFTPAILRLPEH
AALVNGLDGCKGIVRFVILHHLRAFMLPAHIEMIVQRKIDLLEQGDIDSPSLLQDTTFCS
MISESEYEEERVNYTRAQIQNLYQYLKENTSISARRKKDLLKRFERNHALELCINNNEDQ
GSTQSVIKENTTTLSSPFMISSKPKRQGGIVPSDSYNQLTLHSGVSGKPPTSPRNNINLK
RKSNCSKANSKLQYKYSPSSRPMRITPPYSDPLTRKNPKPHK
Nucleotide sequence
Length: 3,539
>Harore.CG.MTP2014.S568.g02404.01.t
AGCAGAACCTATTTTGCTTTATTTGTTATGATAGTTCTGTTTATATACCTTAGTACGAAG
AATTAGCATGAACTCATCCAATGTTCTTCAAGAAGTATGCAACAAATCAGAGAATGCAAG
TAGGCGGCCGTTTAAGGCAACAGAAATATGGAAAGATTTAGTCAATCATCTTCAAGAAAA
TGCACATGTGAAACGAAGAAGAATTATGATGAAGTCACATCATGAATGCTTTAGCGGATC
CAATGCTGTGGAAATACTTCTGAAATATGTTCATGACAATCCAACTAAATTCCCTAATAC
TTCAATAGTGTCACATGAAAACATTGTGAGATTATGTCAAACTTTCATTGATGCAGGCGT
GTTTGAGTCAGTGAATTTTGGAGATGACCCGAAAAAATACAAAAGATTTGAAAATTCCTC
ATCAAGCCTCTATCGATTTATTTCAAAAAAAAAAACTGTTGGTAACTGTGATAGTGAAGT
GTTACCCAGTACTTCTGGCAGTATTGATTTATTGATCAAATTCAGTACTCTAATAAGCCT
CAAAACAACTGATACATATTCAAAGCAGAAATCAGTATTTTTGCATACTGGAAGCAAAAC
TATTAGGCAAAAAAATAGAAATAAACCTGCAGCTGAAACACCTACTAGTGAATCTGATAC
TGAAAATCAACCATTGAAAAAAACACCACTGCAGTGTAGGCGGAACTCAGTGTTTTCTGG
CCTAGTCATGAAAAGATCATCTTCTGATTCAAATTTGAGAAAAGAATCTACAACGACTTC
GTCTTCTGAATCTGATTGCAACCTAAAAATTTGGAGTCCTGGAGATATGCATGAAAAAAA
CAAATCGGGGTTGAGTCAAAGACTATCATTCAGAAAAAAATCATTGAGACGTTCAGGACA
CTCTTCGTATCGGCTAGTACAACCATGTGTTATTCAGAACCCAGTTGTTGCAAAAGATAG
ATTTGATGCGACTCCAAAAAATGATTTGAAAAGGAAAAGCTACAAAGAAAATTCAGAAAT
CATGTCTACTAACAAAGTTTCATTTCTTCATAATAGAAAAAAGTTGAAAAAATTGAACCA
GCAAGAATCTTCACATATCAAGCGAGAAAGTGTCAGAGTTCGCCTCTTGCAAATTCTCGA
CCTCCCTTTTGTGGAGACGTTTGTTATATCTCCTACCTTTGACAAGAAGATTATGTCAAT
CCAACATGGGTCTTCAGACCAGTCAATCAGATTTACAGAAATGCATTATAAGGATGTTGC
CTCGTCATATAACAGCCAAGACCAATGGATATTTACATCGCTGAGTGTAATGCAGCATAT
TCCAAACAGCTACAATATTTTGAGAAATATAGCTAGAGCTGATGAACATTGCAAGAAAAT
TGAGCTTTATTTTGCGGTATCAGATCATTACAATGCACTCAGTCACCCACTTATTGATGA
GCACTACAATGGCATAGCGGAAGGAATTATTGCTTTATTAGCCAGTAAATCTGTGGAAAA
GATAATGGAAGCGATGCAGCTCTTTTTAAATCTACTTCCAGATTCGAGACTAACAGAACT
ACGACATCTATGTTCGTTTTTACATGTTGTTTGCTCTCAGAATGATCCAAAACTAGTTCG
TAAAAGATCTAATCAAGCTTTAGTAATTGATTCATTTACACCTGCAATATTGCGCTTGCC
TGAACATGCAGCACTGGTGAATGGTTTGGATGGCTGTAAAGGAATTGTTCGTTTTGTAAT
TCTCCATCATCTACGTGCTTTCATGCTTCCAGCTCATATTGAAATGATTGTTCAAAGAAA
AATAGATTTGCTTGAACAAGGAGACATTGATAGCCCAAGTCTTCTTCAAGATACTACATT
TTGTTCGATGATATCGGAGAGTGAGTACGAGGAAGAAAGGGTGAATTACACTCGAGCGCA
AATACAAAATCTTTATCAATATCTCAAAGAAAATACTAGTATCTCTGCTCGCAGAAAGAA
GGATCTTCTCAAAAGGTTTGAGCGGAACCATGCACTCGAATTATGTATAAATAACAATGA
AGATCAAGGGTCAACTCAAAGTGTCATAAAGGAAAATACTACCACTCTTTCCAGTCCTTT
CATGATATCGAGTAAACCAAAAAGACAAGGAGGAATAGTGCCATCAGATTCTTATAATCA
ACTTACATTGCATTCCGGTGTTTCTGGGAAACCTCCAACAAGTCCACGAAACAACATAAA
CTTGAAACGGAAGTCAAACTGCAGTAAAGCAAATTCGAAACTTCAATATAAGTACTCACC
ATCGAGTCGCCCAATGAGAATTACACCTCCTTATTCTGACCCACTAACCAGAAAAAACCC
TAAACCTCATAAATGAAGATGATATACTAATTAGCCCTTCGTGTTATACAATAATGCTTG
AAACTTGTTTTAAGATTCTCTCCTGAAACATTTATCAATGTATCTGAACAGATAAAATGG
CAGAAATCACTGAACAGATAGAAGAATCGAGTAACTAGTTGACTGGTGGTAGGAATATTG
GTCGACCTTGTGGACAATGTGCATATTGTGTATATATATTTTTAATTCAATTATGAATTA
CATAGGTGATACGAACATTATACACATGTGCAAAACTGGAAAAAATAATGGGTATTGATG
TCCTAATTTTTTGTATGAATGGTTGTTCAGTTAAATAGAGATCAATATACTGTGATCTGA
CTCACAAACTAAAATATATTTGTCGCAATAAAAAGCTGCCTATAATTTTACTTTACCTAC
AAAACCCACCTACTCGTATAAATAAAGTGGGAACATGTGTAATGTTTTCTACATCTACAC
TTCTTCGGATATTTTTCTGTCTTGTATATAACCTGATATTCCTATGGTTTTGTTCTAATG
TACTTTATCGAAGTCATATCATGACATGAACAATCGACATGATTTTTCTAAAAAATACAA
TTTTTTGTTTTCGTAACATTTCTATATAGCCTTTACTGTACTTTTTCTTCTTGAGGTTTT
GCGTATATTCCTGAATTATGCTATTCAGAGAGAAAATTCAATTGGATGTCTGGCAATGCG
TTATCGATGTTGTATTGAAACGCACTTATGTTTATAGCAGTGCTTGCCCGTGAAAGTAAA
TTTTATGCATTGGCCGTTGATATAAGAGTATGTGCTACGAAGCGTTACAACTGTGAACAG
TACTTGCTTATGCGTGACGCATCCTATTTTGCGCTGCTGTCGGATAACATTAGAAGTGTC
AAACAAAGTGTTCTAGAATTGTAAATTACATTTTATATTCAATATTCAACTGTTGAATGA
GCGTGAGCAGAGTGCAACTGAATATTTTTTAGATTCGGTATTCGTGTTTCAAAAGACAGG
TTATATTGTTAAAAATATATTATATAGTGCATACATATGCAAATAACTGCAATAGATGAC
TGAGATTTCCATTATATTACTACGTAAATGTGCAAGAGGAAAAATTGTCTTATTCCTTAC
ATTTAGAAATATTAAGTGCCTTATTTTTCAGAACAAAGATTGTTATTGCGTTGTAAATT
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[15-125] 1.8E-27 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[26-134] 1.47E-9 |
| ProSiteProfiles |
DEP_dom (IPR000591) - T[35-126] 9.575 |
| SMART |
DEP_dom (IPR000591) - T[36-126] 5.9E-6 |
| Pfam |
DEP_dom (IPR000591) - T[41-124] 9.8E-11 |
| Gene3D |
Rho_GTPase_activation_prot (IPR008936) - T[445-577] 2.3E-5 |
| SUPERFAMILY |
Rho_GTPase_activation_prot (IPR008936) - T[450-564] 3.34E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DEPD7_HUMAN | 35.669 % | 89.7 | 1.05E-18 |