Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S567.g12152.01.t

Possible name(s)

TIMM44

Gene model

Harore.CG.MTP2014.S567.g12152

Location

S567 [25,568 / 27,769]

Sequences

Amino acid sequence

Length: 433

>Harore.CG.MTP2014.S567.g12152.01.p
MLGTTRAILSGNLKKCAIISSSNITSKTSFKPLTSVQYTARQFVVSSQHLSSSKRGFLQN
FIDNLKQEYGKNQELKENIQKFRQEAKELEESEALKKARKKFEDISKETGQSSDVMKETF
KRVQQKVSEAGEEMSKTEFVKQASRFTDTIGDAAKQAADSEAFKKVATGLDSLAKGSGAP
PSTLYRPPKTLRMRDDFPSKKNAEDIVANEEATGVVMHKDSVWNQQWENFKNSKVGERIS
DLKIQYDESDNAIIKASRFLTEKLTDFAGGVFGKTDVSEIMTEISRLEPDFSAHKFIRFC
QRDLIPNVLEALSQRNKEILHDWCAEAPYNQLLFPITQAEQLGFVYESKVVDLDHVDIAA
ATKVEQGPVLVISFQTQQIIVVRNAKGDVVEGNAEQVMRVYHVWALCRDPEEMNPRAAWK
IIDQSMSASPMLL

Nucleotide sequence

Length: 1,302

>Harore.CG.MTP2014.S567.g12152.01.t
ATGTTGGGTACAACGCGCGCCATATTAAGCGGTAACTTGAAAAAATGTGCAATAATATCG
TCGTCAAATATTACATCAAAAACATCTTTCAAACCTTTGACGTCTGTACAGTATACAGCT
CGCCAATTTGTTGTGTCATCTCAACACTTGTCGTCATCAAAAAGGGGATTTCTACAAAAC
TTTATCGATAATCTAAAGCAAGAGTATGGTAAAAATCAGGAGCTCAAGGAAAACATTCAG
AAATTTAGACAAGAAGCAAAAGAACTTGAAGAATCAGAGGCCCTGAAAAAAGCAAGAAAA
AAATTTGAAGACATCAGTAAAGAGACCGGGCAGAGTAGCGATGTTATGAAAGAAACATTC
AAAAGAGTTCAACAAAAAGTTTCCGAGGCTGGAGAAGAAATGAGCAAAACAGAGTTTGTT
AAACAAGCGAGTCGGTTCACAGATACAATTGGTGATGCAGCCAAGCAAGCAGCTGACAGT
GAAGCTTTTAAAAAAGTTGCGACGGGACTAGATAGCCTAGCCAAGGGGTCAGGTGCCCCA
CCATCTACTTTATACAGGCCCCCAAAAACCTTACGGATGCGCGATGACTTCCCTTCGAAG
AAAAACGCTGAAGATATCGTTGCTAACGAAGAAGCGACGGGCGTCGTCATGCACAAGGAC
TCTGTGTGGAACCAGCAATGGGAAAATTTTAAGAACAGTAAAGTCGGCGAAAGAATTTCA
GACCTGAAAATACAATATGACGAGAGCGACAATGCCATTATAAAAGCTTCACGTTTCCTA
ACAGAAAAACTAACAGATTTTGCAGGTGGGGTTTTTGGTAAAACAGACGTGTCAGAAATC
ATGACAGAGATATCGCGCTTGGAACCGGATTTTTCTGCGCATAAATTCATCCGGTTTTGT
CAGCGTGACTTAATACCAAATGTACTCGAAGCGCTGAGTCAAAGGAATAAAGAAATTCTT
CATGACTGGTGTGCAGAAGCGCCATACAACCAACTGTTATTCCCAATCACCCAGGCAGAG
CAACTGGGATTCGTGTACGAATCCAAAGTTGTTGATTTGGATCACGTGGACATTGCTGCA
GCAACAAAGGTTGAGCAAGGTCCTGTTCTAGTGATCAGCTTTCAAACACAACAGATAATT
GTGGTCAGAAATGCCAAAGGAGACGTGGTTGAGGGTAATGCGGAGCAAGTGATGCGTGTC
TACCACGTCTGGGCTCTCTGCCGTGACCCAGAAGAAATGAATCCCAGGGCAGCGTGGAAA
ATCATAGACCAGTCAATGTCAGCTAGTCCAATGCTTCTTTAA

InterProScan

PIRSF	Tim44 (IPR017303) - T[14-433] 3.8E-124
SUPERFAMILY	NTF2-like_dom_sf (IPR032710) - T[239-425] 2.28E-49
SMART	Tim44-like_dom (IPR007379) - T[277-426] 1.1E-29
Pfam	Tim44-like_dom (IPR007379) - T[279-422] 3.8E-35

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TIM44_HUMAN	42.334 %	367	3.17E-124