- Transcript 'Boleac.CG.SB_v3.S803...' >
- Transcript 'Harore.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S562.g15363.01.t
Possible name(s)
SNX13; SNX14; SNX25
Gene model
Location
S562 [1,350 / 18,243]
Amino acid sequence
Length: 983
>Harore.CG.MTP2014.S562.g15363.01.p
MAKKKQSWSLFWSGVTLSLVVATFGLVGLICFLISIICFVGGIVSMLNQHCKHDLEVRLH
CMALEMNQLPHPGIPIILDADYSHRTFSADMKLTSSASIDARLKECLDYLMRDYVKYWYN
DLSDDAEFLHSLQLTLNEVVRVLATRAKNIDWQTYITTNLVDDFASHVRLYRKAEEKIKK
IQANDSASDSQDNISVSSNSAVKPSNNNEKSKVSTQSIVDLFFECEINVEKSVCREQVSC
DKEKQISFFQDISEVILYLLLPKADLHCRPLKALLKEVMVLGIFMPLLQLYSDPDYLNQY
LTWLISDNCLTSEAFLVMTRHSSEVGELQAIRDLADEEIARTRARDDVGDDPAVKQQLSS
MEYVRSLCENRINKLQRGEMDYEQEPTIDSLMADKSAKLYNLPLSATLRNNIALQFFIDY
MQSVDGQAYLFFWLTVDGYRASAEQQLNALKMQQLSGQTKGTPDMEMLRVIGRNIYEQYL
SKNANPRVELDPATDKEILRRLNNEEPSPNVFDELQKKVFQTMQRDEKLYPAFKSSSLYV
KLLAELDLLREPSIQSEDTNGSVSSSSMDDLSASVEPEESSKFSAIITQTGVCTEHGKSY
ALFAISVARYWTTSDGKVRHEKWDTFRRFSEFIDLHQSLKENGSNLGSIRLPSKTIFKDL
NDEFLEKRRSDLNQYLKIILSMDHPQRSLDSVHTFLDAKAYQKNNKTLKKKMDTVMRNVR
NVRNFVLQAPDSFLDGIHKASDKVSGGIQRISKSRNGGTEGSLDDEGLLYDDCRVSEQIE
ANIEGNIPLRIVLLLMDEIFDLKHRNQWLRRQIVAALQQLVRAVFGDRMNRKIVEYVDHA
VAADQVAEYISRFQESFWPNGILADKQLKRDTENRMRTRGLTKSKLLGAIPDELRPLVGT
ETSRRGVMRVFELLQHPELNSRLFIVLLEGVLQRLFPSNRFQELFKKFHSKSPKMRARHR
ERMSRALPTRTRSTITKNRRFKR
Nucleotide sequence
Length: 4,504
>Harore.CG.MTP2014.S562.g15363.01.t
AGTGTTATAGATTATACTTTATCTCCTCAGAACGAGTGGTATCACTGTGCTTTATGATGC
GGTTAGCAGAATAAGATAATCTACCAATGGCAAAGAAAAAGCAGTCATGGAGCTTGTTCT
GGTCTGGAGTTACTCTTTCTTTAGTGGTTGCAACATTTGGTCTTGTTGGTTTAATCTGTT
TTTTGATCAGCATAATATGTTTTGTTGGAGGCATCGTGTCGATGTTGAATCAGCACTGTA
AACATGACCTGGAAGTACGACTTCACTGCATGGCATTAGAAATGAACCAATTACCTCATC
CTGGAATACCAATAATTCTCGATGCTGATTACTCGCATAGAACTTTCTCCGCCGACATGA
AGTTAACGAGCTCAGCAAGTATAGATGCAAGATTAAAAGAGTGCTTAGATTATTTAATGC
GTGACTATGTGAAATACTGGTACAATGACTTGTCCGATGATGCCGAATTTCTTCACTCAT
TGCAACTGACATTAAATGAGGTTGTGCGAGTATTAGCTACAAGAGCGAAAAATATTGATT
GGCAGACTTACATCACTACAAACCTAGTTGATGACTTTGCCTCTCATGTTCGCCTCTATC
GCAAGGCTGAGGAAAAAATCAAAAAAATTCAGGCGAATGATTCTGCGAGCGACAGTCAAG
ATAATATATCTGTATCTTCAAACAGTGCAGTGAAACCATCTAATAACAATGAAAAATCAA
AGGTATCTACTCAGAGCATTGTTGACTTATTTTTTGAATGCGAGATCAATGTCGAGAAGT
CGGTATGTCGGGAACAGGTGTCATGCGATAAGGAGAAACAAATATCTTTTTTTCAGGATA
TTTCTGAAGTTATACTATATCTCTTATTACCGAAAGCAGATCTGCACTGTCGGCCGTTGA
AAGCTTTGCTCAAGGAAGTAATGGTGCTTGGTATCTTCATGCCTCTACTACAACTCTATA
GTGATCCAGATTACCTCAATCAATATCTCACCTGGCTGATTTCTGATAACTGTCTTACGA
GTGAAGCATTTCTCGTCATGACAAGACACAGTTCAGAGGTCGGCGAACTGCAGGCAATAC
GTGATTTAGCGGATGAAGAAATCGCAAGAACACGTGCCAGAGATGATGTCGGAGACGACC
CCGCAGTGAAGCAACAGTTAAGTAGTATGGAATATGTGAGAAGCCTATGCGAGAACAGGA
TTAACAAACTTCAGCGGGGAGAAATGGATTATGAGCAAGAACCAACCATCGATTCTCTAA
TGGCTGACAAATCCGCAAAACTTTATAACCTTCCGTTGAGCGCAACGCTACGAAACAACA
TCGCGCTGCAGTTTTTTATAGACTATATGCAGTCAGTGGATGGGCAGGCCTATCTGTTCT
TCTGGTTAACAGTTGATGGATATCGTGCTTCTGCAGAACAACAGCTGAACGCTTTAAAAA
TGCAGCAGTTGTCTGGTCAAACAAAGGGCACGCCAGACATGGAAATGTTGAGAGTAATAG
GAAGAAATATATATGAACAATACTTAAGTAAAAATGCTAATCCAAGAGTAGAATTAGATC
CCGCAACGGACAAAGAAATTTTGCGTCGACTAAACAATGAAGAACCTTCACCAAATGTAT
TTGATGAATTACAAAAGAAGGTTTTTCAAACGATGCAACGAGACGAAAAACTATATCCCG
CATTCAAATCAAGTTCGCTGTATGTGAAACTTCTGGCAGAGCTCGACTTACTTCGCGAAC
CAAGCATACAGTCGGAAGATACTAACGGATCCGTCTCTAGTTCTTCCATGGACGATTTGA
GTGCGAGCGTAGAACCGGAGGAAAGCAGTAAATTTTCAGCTATTATTACACAAACAGGTG
TATGTACTGAACATGGCAAGTCATACGCCCTTTTTGCCATAAGTGTCGCAAGATATTGGA
CCACGAGTGATGGCAAAGTGCGGCATGAAAAGTGGGATACCTTCAGAAGATTTAGTGAAT
TTATTGACCTTCACCAGAGTCTCAAAGAAAATGGTAGCAACTTAGGATCGATTCGTCTTC
CCAGCAAAACAATATTTAAGGATTTAAATGATGAATTCTTAGAAAAGAGGAGATCTGACC
TAAATCAGTACTTGAAGATTATCCTATCCATGGACCATCCGCAACGATCCCTAGACAGCG
TTCATACATTTTTAGATGCCAAAGCGTACCAAAAGAACAATAAAACACTAAAAAAGAAGA
TGGACACGGTGATGAGGAATGTGCGGAATGTACGTAATTTTGTTCTACAAGCCCCTGATT
CTTTTCTCGATGGAATCCATAAAGCTTCTGATAAAGTGTCCGGTGGAATACAGAGGATAT
CAAAGAGTAGGAATGGGGGAACAGAAGGAAGTCTCGATGATGAAGGATTATTGTATGATG
ATTGCAGAGTTTCAGAACAAATAGAAGCAAATATTGAAGGAAATATACCTCTTAGAATTG
TGCTCCTACTCATGGATGAAATATTCGACTTGAAACATAGAAACCAATGGCTTCGTAGAC
AGATCGTAGCCGCTTTACAGCAATTGGTTCGTGCCGTGTTCGGTGACCGGATGAATCGAA
AAATCGTGGAGTATGTCGATCATGCAGTCGCGGCTGATCAGGTTGCAGAATATATAAGCA
GATTTCAAGAATCTTTCTGGCCCAATGGAATTCTTGCAGACAAACAACTGAAGAGAGACA
CAGAAAATCGTATGAGGACTAGGGGTTTGACGAAATCTAAACTTCTTGGTGCTATTCCAG
ATGAACTTCGACCTCTAGTCGGCACAGAAACCTCGAGGAGAGGGGTGATGCGTGTTTTCG
AATTGTTGCAACACCCAGAGCTAAATTCTCGGTTATTCATAGTATTACTCGAAGGAGTGT
TGCAGCGTCTTTTTCCTTCGAACAGATTTCAAGAACTTTTCAAAAAATTCCATTCCAAAT
CTCCTAAGATGAGAGCAAGACACAGGGAAAGAATGTCCCGGGCTTTACCAACAAGAACGC
GTTCGACAATCACCAAAAATCGGCGTTTTAAGAGATAGCACTATGCTGCTCAGATAAGTT
CCTGTAGAACGAGTGTTAGTTCTATCATACACAACTTTACACATTCTAGAATCTCATTCA
TCGAGTTGCAACTGAACTACTACATACGTTACTTAAATTCATCTCCATACCATTGATTTG
ACTGGTGGTTGTGAGCAAACCTATTGTAATTTTATGTTCTACCATGCATAGCTTGTCTTC
TATACTATTCTTTGATTTCAGTGCAATTCCTTTTGTTACCTGTGAAATAGGAGTTTCATT
TCACATGACTAACGAAACATAATATACAAATCAGGTATTGTTAGTTTTTTTCTTAATCCA
TATCCTATATGCATGTAGGGATTTGAGGATTCCAGTTCTTTACTATTTATGAAACACATT
AATATATTCGTTATATAATTATTTCCCATCTCGAATCGTCCCACATCCCGCTACTTCACA
CTTCTTTTTGATTCAAACTGAAACATTTGTGACAAATTATTGTGATGGGGTTCTTATTTT
TGACTTCTTGTAGCATTACAGGAATATGTGTAACATAATTGACAAAGGTCAAGGCCAAGG
GCAAATTTAGCAATAGGCAATAGGCAATAGAGTTCAGTAGTATGTTTAGAAAATAGGTAA
AATTGTTATTACCGGGAGTTCTGTTCAACTGTGAAATATTGTATAAAGTGTGGGAGCCAA
TGTATCAGATTAATTTCATGGGTGTAATGGTTGGGCGGAATGTAAAAAGCATCAATCTAC
AATTGAAATGTTCATGAAACCCATAATACTACGAAATGCTGTGCAGAATCTTATAAGCCC
CATGGTTCATGTGAAATATGCATCTTGCCCTAGTCCCCAAATCCATGTTTTCAAGACTGA
AAGTGAACGAATAGTATTTCAGCCAATATCTAAAATATGGAGGTGCATTCGTTTCGAAAC
AGCTTAATGAAAGCTGACCAACATATTCTATAAAACTGACAGCACCTTTTTTCGCATCCT
TTATCTAGATGGAGACGTATTGCATAAATGTCTGAATTTTTACCAGCATCTTCTAATAAC
GCATGGTTGATGCTTCTTATTACCTAACATCACTGTGAGCACTAATAATATAATGTTTGT
TGTGTTGTATGATTCTGATACTGTCACAGTAAATTCTGTTGTGATTCCTTATGGTGTTTC
AACTTTCAAATGCTGTTTTGTTGTTCCGACCATAAGATCAGTATCGGATGTCTCGCTGTC
ACCTTGCAGGGGTTTCCAAACTCCTGCCCGCTGCAAGATTCTACTCGGCCAACCAGCTAG
AACTATATATACTGTACATGATAAATTAAATGATACAATTTTTGGAAACAAAAAGAATTG
AACTGAGGGAAATTGTCGACCTTACTCGCGGGTGTCATCCAAGATGGACAAAAAATTCAA
ATCTATTATTTTCATTAAAACAAATTTTACATGTAGATTATAAAACTAATTTTCTTTCTC
TGGC
| SMART |
Phox_assoc (IPR003114) - T[96-309] 6.4E-26 |
| ProSiteProfiles |
Phox_assoc (IPR003114) - T[96-309] 47.541 |
| Pfam |
Phox_assoc (IPR003114) - T[97-304] 5.7E-38 |
| SUPERFAMILY |
RGS_sf (IPR036305) - T[397-546] 8.24E-24 |
| SMART |
RGS (IPR016137) - T[403-543] 1.2E-24 |
| ProSiteProfiles |
RGS (IPR016137) - T[403-526] 15.069 |
| Pfam |
RGS (IPR016137) - T[406-541] 2.4E-17 |
| CDD |
SNX13_RGS (IPR037896) - T[408-541] 1.63648E-61 |
| Gene3D |
PX_dom_sf (IPR036871) - T[578-712] 7.5E-22 |
| ProSiteProfiles |
Phox (IPR001683) - T[581-703] 14.687 |
| SUPERFAMILY |
PX_dom_sf (IPR036871) - T[582-699] 1.24E-18 |
| SMART |
Phox (IPR001683) - T[582-699] 1.7E-7 |
| Pfam |
Phox (IPR001683) - T[590-697] 4.7E-15 |
| Pfam |
Sorting_nexin_C (IPR013937) - T[808-917] 2.6E-26 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SNX13_HUMAN | 40.241 % | 707 | 0 |
| SNX25_HUMAN | 28.739 % | 120 | 9.47E-28 |
