Aniseed - Transcript Card

Transcript 'Harore.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S550.g10039.02.t

Possible name(s)

BBOX1; TMLHE

Gene model

Harore.CG.MTP2014.S550.g10039

Location

S550 [11,086 / 15,408]

Sequences

Amino acid sequence

Length: 440

>Harore.CG.MTP2014.S550.g10039.02.p
MNECEIGIVGERTRLNIKWKDGHEHTWNGCLLRSYCKCKLCRTTYVDKSKLSADITIESA
CAKDGKLVMQINNDYLDNHVTEVELAWLRKYCNCDACLSSAISRREPNYFDPKVTALPTV
DYRDRDKNEDKWIYECADKVMRIGFCVIKNVPQQDSIVLKVASTFGPVHETITNRMFQVI
PQPSPRNTAHTSLGLPYHQDLPWYETEPGIQLLNAHKFDDSVIGGKSQFVDLFQVADILR
KENPEAFKALTKIPASFETKDYKRKKPAQYETMKPHIEVDYFDKVVAVHWNPGVEGVVRI
LNKDVDDYYTSYNKFIKILRRKELEWLFRMDAGDIVVFNNHRMAHARTEYKSKDNGKRHL
QQIHDVGRQAESSDDTNEKGISLAHTALNILLTGVYMVLHCSTVITSEAYTGCAYNKAYN
KLTTQMLSKVIKIWLMVLTM

Nucleotide sequence

Length: 1,323

>Harore.CG.MTP2014.S550.g10039.02.t
ATGAACGAGTGCGAAATTGGAATTGTCGGCGAAAGAACAAGGTTGAATATCAAATGGAAA
GATGGACACGAGCACACTTGGAATGGATGTTTACTTCGCAGTTACTGCAAATGTAAACTA
TGCCGCACCACCTATGTTGACAAATCTAAGTTGAGCGCTGACATCACAATTGAATCGGCG
TGCGCAAAGGATGGAAAGTTAGTCATGCAAATTAATAACGATTATCTCGACAATCACGTG
ACTGAAGTGGAACTTGCTTGGCTGAGAAAATATTGCAATTGTGACGCCTGTCTCTCTAGC
GCCATCTCGCGCAGAGAACCGAATTACTTTGATCCGAAAGTTACTGCATTACCGACGGTT
GATTACAGAGACAGGGATAAAAACGAAGATAAATGGATTTATGAATGTGCTGACAAAGTG
ATGAGGATTGGATTCTGTGTTATCAAAAACGTTCCACAACAGGATTCAATAGTACTTAAG
GTCGCTTCGACATTTGGACCAGTTCATGAAACTATAACAAACAGGATGTTTCAAGTCATT
CCTCAGCCTTCACCTCGTAATACAGCGCATACTTCACTCGGCCTTCCATATCATCAAGAT
CTTCCTTGGTACGAAACTGAACCAGGAATACAACTACTCAATGCTCATAAATTCGACGAT
AGCGTCATCGGAGGGAAATCCCAATTCGTTGACTTATTTCAAGTCGCTGATATTTTGAGG
AAGGAAAACCCAGAAGCGTTCAAAGCATTGACTAAGATTCCAGCTTCGTTTGAGACGAAA
GACTACAAGAGAAAAAAGCCTGCGCAATACGAGACCATGAAACCTCATATTGAAGTCGAT
TATTTCGACAAAGTTGTTGCTGTTCATTGGAATCCGGGCGTTGAAGGTGTTGTCCGAATT
CTCAACAAAGATGTCGATGATTATTACACTTCGTACAACAAGTTTATCAAAATATTAAGA
AGAAAAGAACTCGAGTGGCTGTTTCGCATGGACGCCGGTGACATTGTAGTATTCAACAAC
CACAGAATGGCTCACGCAAGAACAGAATATAAATCAAAAGACAACGGGAAACGACATCTA
CAGCAAATACATGACGTTGGGAGACAAGCTGAAAGTTCCGATGATACCAATGAAAAAGGA
ATATCTCTTGCTCACACAGCTCTCAATATCCTTTTAACTGGAGTATATATGGTATTACAC
TGTTCTACTGTAATTACATCTGAAGCTTATACAGGTTGTGCGTATAACAAGGCATATAAC
AAACTCACAACTCAAATGCTTTCTAAAGTAATTAAAATTTGGCTTATGGTGTTAACAATG
TAA

InterProScan

Gene3D	GBBH-like_N_sf (IPR038492) - T[1-71] 8.6E-6
Pfam	GBH-like_N (IPR010376) - T[12-61] 1.7E-6
Pfam	TauD/TfdA-like (IPR003819) - T[119-363] 3.9E-32

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
BODG_HUMAN	26.997 %	127	1.42E-32
TMLH_HUMAN	22.961 %	83.2	2.8E-17