- Transcript 'Phmamm.CG.MTP2014.S8...' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Phfumi.CG.MTP2014.S4...' >
- Transcript 'Moocul.CG.ELv1_2.S48...' >
- Transcript 'Harore.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S54.g01628.01.t
Possible name(s)
DNMT1; KMT2A; TRDMT1
Gene model
Location
S54 [248,952 / 253,047]
Amino acid sequence
Length: 1,364
>Harore.CG.MTP2014.S54.g01628.01.p
MNNSETVAVLKDTKIETSSKTRQLSITDMFQRKAKRKADDDKENQIESSENLSEPTAAPS
NKRIKENGVHIEVENGNTTPLINGDVESSSVKQAPEDKSCADQSTEDLSLLKKKTSTIKC
KECRQLLDDVDIFPGDSPDACEEFIALTHESLSVFVGNEETGRPQHKITNFSVYDKNTHL
CPFDGGLIEKNVELFFSGFIKPIYVEDTSVEGGVEATRLGPINAWWTAGFDGGEKALVGF
STAFAEYFLTEASSCYSKIWETMQEKIYMSKLVIEYLSDNEEVGYEDLVNYIRRCVPPPY
IQIYGFTEDSLLRHAQFVVEQVESFDDARTDDEEPLIGRMCMRDLIHLAGVTLGKRKTAR
RQIVKEKKVVKASSTKATTTELVASVMESFFQGTVDTKISKARRRRCGVCENCQEPDCGT
CSACKDMVKFGGTGTSKQACVKRKCPNMIYNEDEDASEEKEEVIPKSIFTSPHETKGMRK
SKKTQSWIGEPSNKSNSKLYYKSVKINDEIVEIGDCVSVLPNDQEKGLYVGKIVKLWEGS
SKVKWMHIDWFIRASESILGEGADKAELFLTDDCEDTKIEYVSCKVEVHQLAQPDDWFML
GGEPLKTHSYDGVTTFFYQKWYDFEIARFVDPPVTTCSEGECESCFRIEDKEQRNTPMAN
GEISKSKNAVKYEKLQYKGETFSVGDSVYLLPEACDFDALQAEEKAQTKSKKKFDCDEYP
ELYRKTKHIKGSNENVPEPFRVVRIISIFSRNKSNAEKKNAVELEVAKFYRPENTHQGIS
VSYYNDLNMLYWSDETVTVPAKEIQGKCRVEYEYDLKTALHEYTNGGPDRFYFNEAYSAS
DKSLDEPPLSSRKMRGKSNGKVSSKSGKITKVTTKQLAKEQEVEEEVQNSFSKLKTLDVF
AGCGGLSEGFHQAGIAESSFAIELWDPAAQAYRLNNPGATVFTEDCNVILRQIMDGEQKN
SCGQTLPKRGEIELLCGGPPCQGFSGMNRFNSREYSRFKNSLVVSYLSYCDYFRPRFFLL
ENVRNFVSFKNCLVLKLTMATLIKMGYQCTFGVLQAGHYGVAQTRRRAIILAAAPGEKLP
FYPEPLHSFSLKSGSLIVQIDDKRYRNNITRLSSAPFRTITVRDTMSDLPKIANGHSKVE
ISYQSDPRSHFQRVIRGSNYQPVLRDHICKLMSPLVEARMSYIPLTAGSDWRDLPNKQVK
LPDGYTKLLRYTHHDKRQGKSPSGSLRGVCSCATGGQCDPMDRQFNTLIPWCLPHTGNRH
NHWAGLYGRLEWDGYFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFG
TTLDKHREVGNAVPPLMAKAIGREIKKSLVWKTAQTVKTKKIED
Nucleotide sequence
Length: 4,095
>Harore.CG.MTP2014.S54.g01628.01.t
ATGAACAACTCCGAAACCGTCGCAGTCCTGAAGGACACAAAGATTGAAACTTCTTCAAAG
ACCCGCCAACTAAGCATCACAGACATGTTTCAACGGAAAGCGAAAAGGAAAGCTGATGAT
GACAAAGAAAATCAAATTGAAAGCAGTGAAAATTTGTCCGAACCAACCGCTGCACCTAGC
AATAAACGCATTAAAGAAAATGGTGTTCATATTGAAGTTGAAAATGGAAATACCACTCCA
CTCATCAATGGCGATGTTGAGTCTTCTTCAGTCAAGCAAGCACCTGAAGACAAAAGTTGT
GCTGATCAATCTACTGAAGATTTGAGTTTATTGAAGAAAAAAACTAGCACAATAAAGTGT
AAAGAATGTAGACAGCTACTGGACGACGTAGACATCTTTCCTGGCGATTCTCCTGATGCT
TGTGAAGAATTTATAGCCCTTACACATGAAAGTCTATCGGTATTTGTTGGGAATGAGGAA
ACAGGAAGACCTCAACATAAAATTACCAACTTTAGCGTCTACGATAAAAATACCCACTTG
TGTCCCTTTGACGGGGGTTTGATAGAGAAAAACGTCGAGTTGTTTTTCAGTGGGTTCATA
AAACCCATATATGTCGAGGATACCAGTGTCGAAGGTGGAGTTGAAGCCACTCGACTCGGT
CCTATAAACGCTTGGTGGACCGCTGGCTTTGACGGTGGAGAGAAGGCCTTGGTAGGGTTT
TCGACAGCCTTCGCCGAATATTTTTTGACAGAGGCAAGTTCGTGTTACTCAAAGATTTGG
GAAACCATGCAGGAAAAAATTTACATGAGCAAACTGGTGATTGAATATCTATCGGACAAT
GAGGAAGTCGGATATGAAGACCTGGTTAATTACATCAGACGATGTGTCCCACCACCCTAC
ATTCAGATTTACGGTTTTACTGAAGATTCTTTACTACGTCACGCTCAGTTTGTAGTGGAG
CAAGTAGAATCATTTGATGATGCACGGACAGACGATGAAGAACCTCTTATAGGACGCATG
TGCATGCGTGATCTGATACATCTCGCCGGCGTGACTTTAGGTAAACGCAAGACTGCACGA
AGACAAATCGTAAAAGAGAAAAAGGTAGTCAAGGCCTCGTCAACTAAAGCCACTACTACT
GAACTGGTTGCCTCTGTTATGGAGTCATTTTTTCAGGGAACAGTTGACACGAAAATCAGC
AAGGCACGGAGAAGAAGATGTGGCGTATGCGAAAATTGCCAAGAGCCGGATTGTGGAACA
TGCAGTGCTTGTAAAGATATGGTAAAATTTGGAGGTACCGGAACCTCCAAGCAAGCTTGC
GTGAAAAGGAAATGCCCAAACATGATTTACAACGAAGATGAAGATGCTAGCGAGGAAAAG
GAAGAGGTCATACCGAAAAGCATATTCACTTCTCCACATGAAACTAAGGGTATGAGAAAG
TCAAAGAAAACACAAAGTTGGATTGGTGAGCCAAGTAACAAATCAAATTCCAAACTGTAT
TACAAATCTGTCAAGATTAATGACGAGATAGTTGAGATCGGCGACTGCGTTTCTGTTTTA
CCCAATGACCAGGAAAAAGGACTTTACGTTGGCAAAATTGTAAAACTCTGGGAAGGTTCC
AGTAAAGTAAAATGGATGCATATTGACTGGTTCATCCGTGCTTCTGAATCGATTCTGGGT
GAGGGGGCTGACAAGGCCGAACTATTCCTTACTGATGACTGTGAAGATACGAAGATAGAA
TACGTTTCCTGCAAGGTCGAAGTTCATCAATTGGCCCAACCGGATGACTGGTTCATGTTG
GGTGGAGAACCTTTGAAAACCCATTCCTATGATGGAGTCACTACTTTTTTCTACCAAAAG
TGGTATGATTTTGAAATCGCACGATTTGTAGATCCCCCAGTGACTACGTGCAGCGAAGGA
GAGTGCGAGTCATGTTTTCGTATAGAAGATAAAGAGCAGAGAAACACACCTATGGCAAAC
GGTGAGATAAGTAAATCGAAGAATGCTGTGAAGTACGAAAAACTCCAGTACAAAGGTGAA
ACTTTTTCCGTGGGAGATTCCGTATACCTGTTACCGGAAGCCTGCGACTTCGACGCTCTA
CAAGCTGAGGAAAAAGCACAAACAAAAAGCAAGAAAAAGTTTGACTGTGACGAATATCCC
GAGTTGTACCGTAAAACAAAACACATCAAAGGAAGCAACGAAAACGTCCCGGAGCCGTTC
AGAGTAGTTAGAATCATATCGATATTCTCCCGTAATAAATCAAACGCAGAGAAAAAGAAC
GCTGTTGAGCTTGAGGTAGCCAAGTTTTACCGGCCTGAGAACACACACCAGGGAATTAGT
GTTTCGTATTATAACGATCTGAACATGCTTTACTGGTCAGACGAAACAGTGACTGTTCCT
GCCAAGGAAATACAGGGAAAATGTAGAGTGGAATATGAGTATGACTTGAAAACCGCTCTT
CATGAATACACAAATGGTGGGCCAGACCGGTTTTACTTTAACGAAGCTTATAGTGCTTCG
GACAAATCTCTGGATGAGCCTCCACTATCTTCCCGTAAAATGAGAGGCAAGTCTAACGGT
AAAGTCAGTTCCAAGTCTGGGAAAATTACCAAAGTCACCACGAAACAACTTGCAAAAGAA
CAAGAGGTTGAAGAGGAAGTTCAGAACAGTTTCAGCAAACTTAAAACCCTTGATGTCTTT
GCCGGTTGCGGGGGTTTGTCGGAAGGATTTCACCAAGCCGGTATTGCAGAGTCCTCCTTT
GCAATAGAACTGTGGGACCCTGCTGCTCAGGCCTATCGTCTGAATAACCCTGGTGCTACT
GTTTTCACAGAAGACTGCAACGTCATTTTGAGGCAAATTATGGACGGAGAACAGAAGAAC
TCTTGCGGTCAGACGTTGCCCAAGAGGGGCGAGATAGAACTGTTGTGCGGTGGTCCGCCG
TGCCAGGGATTTAGTGGCATGAATAGATTCAATTCCAGAGAATACTCCAGGTTCAAGAAT
TCCCTGGTAGTTTCCTACCTGTCATACTGCGACTATTTCCGGCCACGTTTTTTTCTTCTG
GAAAACGTGAGAAATTTTGTTTCATTCAAGAATTGTTTGGTGCTCAAACTCACGATGGCC
ACATTGATTAAGATGGGATACCAATGCACTTTTGGAGTTTTGCAGGCAGGCCATTATGGT
GTGGCACAGACCAGGCGAAGAGCTATCATACTGGCAGCCGCACCCGGAGAAAAGCTTCCT
TTTTACCCGGAACCTCTGCACAGCTTTTCGCTGAAAAGCGGATCCCTGATAGTACAGATA
GACGACAAACGATACAGAAACAACATCACTAGATTGTCTTCAGCACCGTTCCGTACCATT
ACGGTGAGAGATACCATGTCTGATCTTCCTAAGATTGCAAACGGCCATTCCAAAGTCGAG
ATATCGTATCAGTCTGATCCCAGGAGTCACTTCCAGCGAGTAATACGAGGATCCAACTAT
CAGCCTGTTCTTAGAGATCACATTTGTAAGCTCATGAGTCCATTAGTAGAAGCTCGTATG
AGTTACATACCATTAACTGCGGGTTCTGACTGGAGAGATCTACCTAACAAACAGGTGAAA
TTGCCAGACGGTTACACTAAGCTTCTGAGATATACGCACCACGATAAAAGACAAGGAAAG
AGTCCGTCGGGCTCATTGCGTGGAGTGTGTTCTTGTGCTACCGGTGGTCAGTGTGATCCT
ATGGATAGGCAGTTCAACACTCTGATCCCTTGGTGCTTGCCCCACACTGGCAATCGGCAT
AACCATTGGGCTGGCCTGTATGGTCGCCTGGAGTGGGATGGCTACTTCAGCACGACCGTC
ACCAACCCTGAACCCATGGGAAAACAAGGAAGAGTTCTGCATCCGGAGCAACATCGTGTG
GTCAGCGTAAGGGAATGTGCGAGGTCACAAGGTTTCCCAGACACCTACAGATTTTTTGGC
ACGACTCTGGACAAACACAGGGAGGTAGGAAACGCTGTGCCACCTCTCATGGCTAAAGCT
ATCGGGCGTGAGATAAAAAAGTCGCTTGTATGGAAGACAGCCCAAACTGTAAAAACAAAG
AAAATTGAGGATTGA
| PIRSF |
DNMT1-like (IPR017198) - T[2-1364] 0.0 |
| Pfam |
Cytosine_MeTrfase1_RFD (IPR022702) - T[161-294] 2.5E-39 |
| ProSiteProfiles |
Znf_CXXC (IPR002857) - T[400-446] 14.199 |
| Pfam |
Znf_CXXC (IPR002857) - T[401-445] 6.4E-14 |
| ProSiteProfiles |
BAH_dom (IPR001025) - T[509-633] 15.717 - T[721-848] 15.546 |
| SMART |
BAH_dom (IPR001025) - T[509-633] 2.0E-21 - T[680-848] 6.9E-26 |
| Pfam |
BAH_dom (IPR001025) - T[511-631] 1.9E-14 - T[680-847] 3.1E-18 |
| SUPERFAMILY |
SAM-dependent_MTases (IPR029063) - T[893-1196] 5.09E-82 - T[1259-1346] 5.09E-82 |
| ProSiteProfiles |
C5_MeTfrase (IPR001525) - T[894-1352] 53.546 |
| Pfam |
C5_MeTfrase (IPR001525) - T[895-1347] 4.3E-51 |
| PRINTS |
C5_MeTfrase (IPR001525) - T[895-911] 7.0E-15 - T[1014-1028] 7.0E-15 - T[1060-1073] 7.0E-15 |
| TIGRFAM |
C5_MeTfrase (IPR001525) - T[897-1345] 2.4E-36 |
| ProSitePatterns |
C5_DNA_meth_AS (IPR018117) - T[973-985] . |
| ProSitePatterns |
C5_meth_CS (IPR031303) - T[1327-1345] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DNMT1_HUMAN | 56.416 % | 1442 | 0 |