- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Phfumi.CG.MTP2014.S5...' >
- Clone 'AHC0AAA129YF20' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Harore.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S53.g02054.01.t
Possible name(s)
ACADL; ACADS; IVD
Gene model
Location
S53 [176,816 / 178,066]
Amino acid sequence
Length: 317
>Harore.CG.MTP2014.S53.g02054.01.p
MTSAIAIEEAFYANCSGPGFSMQSEIVMPYISTYGTKEQMEKYIPDMTAGRKIGSIAFTE
PVAGSDLQAIRTHVKRDGNDWILNGSKTFISNGFMCDVSVVAAMTKQHGDASAHSMSLFL
VDADNPGFKKGKKLKKLGLKAQDTAELFFEDCRLPQTALLGGEEFLNCGFYMLMKELIQE
RLSVAIAGVAICEAAFEETREYVNQRKAFGKRISDFQTVQHKLAEIKSEVAAARAFIDGC
IEIHSIKKLDTSTASMAKYYSTDLAVSVTSRCLQLFGGWGYMLEYPMARRLADARLMPIY
AGTNEIMKEVITRKIVK
Nucleotide sequence
Length: 954
>Harore.CG.MTP2014.S53.g02054.01.t
ATGACTAGTGCAATAGCAATCGAAGAAGCATTTTACGCCAACTGCAGCGGGCCTGGATTC
TCCATGCAATCTGAAATTGTGATGCCTTATATCAGCACGTATGGAACGAAGGAACAAATG
GAAAAATACATTCCAGATATGACAGCAGGCAGAAAGATCGGTTCGATTGCCTTTACCGAG
CCCGTTGCCGGCAGTGACTTACAGGCCATACGAACCCACGTCAAACGAGATGGAAATGAC
TGGATTCTCAACGGAAGTAAAACCTTTATTAGCAACGGATTTATGTGTGACGTATCTGTC
GTGGCAGCCATGACGAAACAGCACGGTGATGCTAGCGCGCACAGCATGAGTCTATTTTTA
GTCGATGCGGACAATCCAGGTTTTAAGAAGGGAAAGAAACTTAAAAAATTAGGACTGAAA
GCACAAGACACTGCCGAACTGTTTTTCGAAGATTGTCGTCTTCCGCAGACGGCTTTACTT
GGCGGGGAGGAATTTCTGAATTGTGGTTTCTATATGCTCATGAAAGAACTGATCCAAGAA
CGACTAAGTGTGGCGATAGCCGGGGTCGCAATATGCGAAGCCGCGTTTGAGGAGACCAGA
GAATATGTCAACCAAAGGAAAGCGTTCGGAAAAAGGATATCTGACTTTCAGACGGTACAG
CATAAACTGGCTGAAATAAAATCAGAGGTCGCTGCAGCAAGAGCTTTTATTGATGGATGC
ATTGAGATCCACAGCATTAAGAAACTGGACACATCAACAGCTTCAATGGCGAAATATTAC
AGCACCGACCTTGCAGTGAGCGTTACCAGCCGATGTTTACAATTGTTTGGTGGATGGGGA
TACATGTTGGAATATCCAATGGCAAGGAGATTAGCGGACGCGAGACTGATGCCGATTTAC
GCTGGAACGAATGAGATAATGAAAGAGGTCATCACCAGAAAGATTGTAAAGTAA
| Gene3D |
AcylCoA_DH/ox_N_sf (IPR037069) - T[1-53] 3.2E-8 |
| Pfam |
AcylCoA_DH/ox_N (IPR013786) - T[2-50] 6.7E-7 |
| SUPERFAMILY |
AcylCoA_DH/oxidase_NM_dom (IPR009100) - T[3-177] 4.06E-53 |
| Pfam |
Acyl-CoA_Oxase/DH_cen-dom (IPR006091) - T[55-152] 1.4E-24 |
| SUPERFAMILY |
AcylCo_DH-like_C (IPR036250) - T[167-315] 8.98E-46 |
| Pfam |
AcylCo_DH/oxidase_C (IPR009075) - T[168-315] 1.7E-41 |
| ProSitePatterns |
Acyl-CoA_DH_CS (IPR006089) - T[274-293] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACADS_HUMAN | 33.861 % | 184 | 2.67E-55 |
| IVD_HUMAN | 36.545 % | 197 | 5.72E-60 |
| ACADL_HUMAN | 59.365 % | 397 | 3.1E-138 |