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TRANSCRIPT CARD

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  1. EST 'AHC0AAA233YB16_RM1' > 
  2. Transcript 'Haaura.CG.MTP2014.S2...' > 
  3. Transcript 'Harore.CG.MTP2014.S2...' > 
  4. Transcript 'KH2012:KH.C9.220.v1....' > 
  5. Transcript 'Harore.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S536.g06968.01.t

Possible name(s)

Harore.CG.MTP2014.S536.g06968

Gene model

Harore.CG.MTP2014.S536.g06968

Location

S536 [25,053 / 25,527]

Sequences

Amino acid sequence

Length: 157

>Harore.CG.MTP2014.S536.g06968.01.p
MFLTVVSMLRAAKIYPQSRWYKHQKLKEQAKHFWLEALRNRTGKVKELLRRALVNQAFAR
KNKYVIGNRLKFERLAAACSEHNINTKEFRLGLTRCKINLNTTMLINLAIYEPRTFERMV
ELSERARIEAYYEMHQKLPERCLSSGTQTKKLTTALY

Nucleotide sequence

Length: 474

>Harore.CG.MTP2014.S536.g06968.01.t
ATGTTCCTGACAGTCGTGAGTATGCTTCGTGCTGCGAAGATTTATCCGCAGTCACGATGG
TACAAGCACCAGAAATTAAAAGAGCAAGCAAAACATTTCTGGTTGGAAGCCTTGAGGAAT
CGAACAGGAAAAGTGAAAGAACTATTGAGACGTGCCCTTGTTAACCAGGCATTCGCGAGA
AAGAATAAATACGTCATAGGTAACAGACTGAAATTCGAACGGTTAGCAGCAGCTTGCTCT
GAACACAATATCAATACGAAAGAATTCAGACTTGGATTAACGCGATGTAAGATCAATTTG
AACACCACCATGCTGATAAACTTGGCCATTTACGAACCAAGAACGTTCGAACGCATGGTC
GAACTTTCTGAACGAGCGAGGATCGAAGCTTATTATGAAATGCACCAGAAATTACCAGAG
AGATGTTTGTCCTCTGGAACACAGACGAAAAAATTAACGACAGCGCTGTATTGA

InterProScan

PANTHER
Ribosomal_L20 (IPR005813) - T[8-130] 5.2E-20
SUPERFAMILY
Ribosomal_protein_L20_C (IPR035566) - T[18-123] 1.7E-14
Pfam
Ribosomal_L20 (IPR005813) - T[19-118] 7.4E-14
Gene3D
Ribosomal_protein_L20_C (IPR035566) - T[68-128] 9.5E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value