- Transcript 'Harore.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S52.g02092.01.t
Possible name(s)
FOXA2; FOXB1; FOXB2
Gene model
Location
S52 [324,554 / 326,294]
Amino acid sequence
Length: 579
>Harore.CG.MTP2014.S52.g02092.01.p
MPRPGRDSYGDQKPPYSYIALTAMAIQSSPDKMMSLSEIYKYIMDRFPFYRKNTQRWQNS
LRHNLSFNDCFMKVPRRADRPGKGSLWTLHPTCGQMFENGSFLRRRKRFKVAGCDEEHDA
EFTRPFVSEDSPHQGIRRYDPAHVSPSAAEHAFLGMSKHHHAMIDTNKIAAMMQPNIMAA
AGPWIAQQSHSPNGVPFLPRPGFAMPPPHALAASAYFRSAIAEYQAALAGSILAKHRQQV
SPTQVHPISALTMLPAANASMMTLPHLSAIKSLAQASEARDAIVKHNLLNNRRLNMQHEV
QDLTIGKRREKEEDKKMKKSTVSFSIDNIMKGSFSKEADSTQKDTCHGSNNTPSSESTSP
RKNYATEKRSKKRSLSPDSTTSTPKRMNMEEDRRHSAFSGTNVMHGEQAFDFRDIWSQNK
PTNQINEIASISPDAKQVSSALENLYRYAARACNRMQLEKSYRENTTLPISHSSFSSTST
MEECSPKPFPSSPKEQPTSSSSEDDSPMSYRRINSDEKRKRTRGMDSSGKDNPMASTSDS
ESANSRETEHYYQTKSRSLPENSLFKAETTSPVSTMIAA
Nucleotide sequence
Length: 1,740
>Harore.CG.MTP2014.S52.g02092.01.t
ATGCCTCGTCCAGGAAGAGATTCTTACGGTGACCAGAAACCACCGTACTCTTACATCGCC
TTGACGGCAATGGCAATCCAATCATCTCCTGATAAAATGATGAGTTTGTCCGAGATCTAC
AAGTACATCATGGATAGGTTTCCGTTTTACAGAAAGAACACCCAACGTTGGCAAAATTCG
CTACGTCACAACCTATCATTCAACGATTGCTTCATGAAAGTACCCAGGCGAGCCGACCGA
CCAGGGAAAGGCAGTTTATGGACACTCCATCCGACCTGTGGACAAATGTTCGAAAATGGA
AGTTTCCTAAGAAGAAGAAAACGATTCAAGGTAGCTGGATGCGACGAAGAACACGATGCT
GAATTCACGAGGCCATTTGTTTCGGAAGATAGCCCTCACCAAGGTATTAGAAGATACGAT
CCAGCTCATGTGAGTCCCAGTGCAGCGGAACATGCTTTTTTAGGCATGTCAAAACATCAT
CACGCTATGATAGATACCAATAAAATAGCAGCTATGATGCAACCAAATATAATGGCTGCA
GCCGGACCATGGATAGCCCAACAGTCCCATTCTCCGAATGGCGTGCCGTTTCTACCGAGG
CCTGGATTTGCAATGCCACCTCCTCATGCTTTGGCTGCATCAGCCTACTTCCGATCGGCA
ATTGCCGAATACCAGGCCGCGCTTGCTGGGTCAATTTTGGCAAAGCATAGACAGCAGGTT
TCACCAACACAAGTTCATCCCATATCAGCTTTGACTATGTTACCAGCAGCAAATGCATCT
ATGATGACATTACCTCATCTATCGGCGATAAAATCCCTAGCGCAAGCATCCGAGGCTAGG
GACGCAATTGTAAAACACAACCTTTTAAATAATCGGAGACTGAACATGCAACATGAAGTT
CAAGATTTAACTATCGGGAAGAGACGGGAAAAGGAAGAAGATAAAAAAATGAAGAAAAGC
ACAGTGTCATTCTCCATTGATAATATAATGAAAGGGTCGTTTTCAAAGGAGGCAGATTCT
ACGCAAAAAGATACCTGTCATGGTTCTAATAATACACCCAGTTCCGAATCTACCTCACCG
AGGAAGAACTACGCGACTGAGAAAAGAAGTAAAAAGAGATCTCTATCTCCTGACTCCACA
ACTTCGACTCCGAAACGAATGAACATGGAAGAGGATCGTAGACATTCGGCTTTCTCAGGT
ACAAACGTTATGCATGGAGAACAAGCGTTTGATTTTCGAGATATTTGGAGTCAAAACAAA
CCGACTAACCAGATAAATGAAATTGCAAGCATTTCGCCCGATGCCAAGCAAGTTTCCAGC
GCTCTTGAAAATCTGTATCGTTACGCCGCACGCGCTTGTAACAGAATGCAACTGGAAAAG
AGCTACAGGGAAAACACTACGTTACCTATAAGTCACTCCTCTTTTTCAAGTACATCGACA
ATGGAAGAATGTTCTCCAAAACCGTTCCCGTCCTCTCCAAAAGAACAACCAACGTCTTCG
AGCAGCGAAGATGATTCTCCCATGTCTTACAGAAGGATAAACTCGGATGAGAAAAGAAAG
AGAACCAGGGGAATGGATAGTTCTGGAAAAGACAATCCAATGGCGTCGACTTCGGATAGT
GAAAGTGCTAACAGCCGAGAAACTGAACACTACTATCAGACGAAATCAAGATCACTGCCA
GAAAACAGCTTGTTCAAAGCAGAGACCACCTCGCCCGTGTCAACGATGATCGCAGCGTAA
| SMART |
Fork_head_dom (IPR001766) - T[11-101] 3.9E-60 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[11-112] 9.0E-45 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[12-107] 2.13E-39 |
| PRINTS |
Fork_head_dom (IPR001766) - T[13-26] 4.0E-22 - T[34-51] 4.0E-22 - T[57-74] 4.0E-22 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[13-107] 39.144 |
| Pfam |
Fork_head_dom (IPR001766) - T[13-97] 4.3E-36 |
| CDD |
Fork_head_dom (IPR001766) - T[13-90] 1.46389E-49 |
| ProSitePatterns |
TF_fork_head_CS_1 (IPR018122) - T[13-26] . |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[57-63] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXA2_HUMAN | 67.241 % | 182 | 3.81E-51 |
| FOXB1_HUMAN | 81.739 % | 223 | 5.06E-68 |
| FOXB2_HUMAN | 76.271 % | 211 | 2.45E-62 |
