- Transcript 'Boleac.CG.SB_v3.S22....' >
- Molecular Tool 'p10.27::NICD' >
- Transcript 'Phfumi.CG.MTP2014.S7...' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S524.g01146.02.t
Possible name(s)
SLC6A2; SLC6A3; SLC6A4
Gene model
Location
S524 [5,679 / 10,792]
Amino acid sequence
Length: 434
>Harore.CG.MTP2014.S524.g01146.02.p
YLGRIVIMNGLKTAHVWIKLKRQLSTYHGVTRHNHRHSNSSSTRHVLELHKSSGFGDLGL
PKWELVICLFLVYFIVYFSLWKGVKSSGKVVWVTATFPYIVLFILLIRGAMLPGAGMGIE
FYLKPKWHLLAQPTVWLEAATQVFFSLGPGFGTLLALASYNDFHNNCYRDALITSTINCL
TSFMAGFVVFSVLGYMAHLLHKDDIEDVTTPGVGLLFVVYSQALTTFDGSVFFSIIFFLM
IITLGLDSTFGGMEAIITGFSDEFPKTIGKHRELFVLGLLTVSFTLALSTTTYGGLYMVT
LMEMYATGTAIMIVVLLEAIGVSWYYGIDRVSHDIRSMIGFVPGIYWRICWKYISPLFLT
FMIIMSMIVSNNLRYGIYVYPDWSNIVGWLITMSSVSMVPTYAIYRMMKDCLSERKNEGS
EKCEDKSSRTSDYM
Nucleotide sequence
Length: 1,377
>Harore.CG.MTP2014.S524.g01146.02.t
TTACCTTGGTCGCATTGTGATCATGAATGGATTGAAAACAGCACATGTGTGGATCAAATT
AAAGCGGCAGCTCTCAACCTATCATGGAGTAACACGTCACAATCACCGGCACAGCAATTC
TTCGAGTACACGTCACGTTCTTGAGCTTCATAAATCATCTGGTTTTGGTGATCTCGGTCT
TCCAAAGTGGGAACTGGTGATTTGTCTCTTCCTTGTCTACTTCATTGTCTATTTCAGTCT
CTGGAAAGGAGTGAAGTCATCGGGAAAGGTTGTCTGGGTGACTGCGACATTCCCTTACAT
TGTCCTCTTCATCTTATTGATCCGCGGTGCAATGCTTCCTGGAGCAGGAATGGGAATCGA
GTTTTATCTTAAACCGAAATGGCATTTGCTTGCTCAACCGACTGTCTGGCTCGAAGCAGC
TACACAGGTATTTTTCTCGCTTGGTCCCGGCTTTGGAACACTTCTAGCATTGGCGAGTTA
CAATGATTTTCACAATAATTGTTATCGGGATGCATTGATAACAAGTACAATCAATTGTTT
GACAAGTTTTATGGCTGGTTTCGTTGTATTCTCTGTGCTTGGATACATGGCTCACTTACT
GCACAAGGACGACATTGAAGATGTTACCACACCAGGTGTTGGACTTCTCTTCGTTGTATA
CAGTCAAGCATTAACAACATTTGATGGATCTGTGTTCTTCTCGATCATTTTCTTTCTAAT
GATTATAACTCTCGGATTGGATAGCACATTCGGTGGAATGGAAGCTATAATCACCGGATT
CTCTGATGAATTTCCAAAAACAATTGGAAAACATCGTGAACTATTCGTTCTTGGTCTTCT
GACAGTCAGTTTCACATTGGCATTGTCGACAACTACTTACGGGGGATTGTACATGGTGAC
ATTGATGGAAATGTACGCGACTGGCACTGCAATCATGATCGTAGTTTTACTGGAAGCAAT
TGGTGTCAGCTGGTATTACGGTATTGATCGTGTTTCGCATGACATACGCTCGATGATTGG
TTTCGTTCCTGGAATTTATTGGAGAATTTGTTGGAAATACATAAGTCCACTGTTTCTTAC
TTTCATGATCATCATGAGTATGATAGTGAGCAACAATCTTCGGTATGGAATCTACGTTTA
TCCTGATTGGTCAAATATTGTGGGATGGCTCATCACAATGTCGTCTGTTTCCATGGTACC
CACTTACGCCATCTACCGAATGATGAAAGATTGTTTGAGTGAACGAAAGAACGAAGGCTC
AGAAAAATGTGAAGATAAGTCGTCACGGACGAGCGATTATATGTGACGTAATATATTATA
TAGTGTGGGGTAAAATGTACTCTAGGGCGGGCATGGTCAAACATATGCGAAAATATG
| ProSiteProfiles |
Na/ntran_symport (IPR000175) - T[1-412] 68.115 |
| SUPERFAMILY |
SNS_sf (IPR037272) - T[38-408] 1.01E-106 |
| Pfam |
Na/ntran_symport (IPR000175) - T[39-409] 1.2E-138 |
| PANTHER |
Na/ntran_symport (IPR000175) - T[39-410] 3.5E-158 |
| PRINTS |
Na/ntran_symport (IPR000175) - T[90-107] 2.2E-39 - T[172-192] 2.2E-39 - T[227-246] 2.2E-39 - T[308-328] 2.2E-39 - T[348-368] 2.2E-39 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SC6A2_HUMAN | 55.291 % | 447 | 3.32E-153 |
| SC6A3_HUMAN | 50.386 % | 402 | 1.67E-135 |
| SC6A4_HUMAN | 53.968 % | 431 | 6.65E-147 |