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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S3...' > 
  2. Transcript 'Haaura.CG.MTP2014.S1...' > 
  3. Transcript 'Cisavi.CG.ENS81.R11....' > 
  4. Transcript 'Moocci.CG.ELv1_2.S59...' > 
  5. Transcript 'Harore.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S511.g11190.02.t

Possible name(s)

PAPD4; ZCCHC11; ZCCHC6

Gene model

Harore.CG.MTP2014.S511.g11190

Location

S511 [34,302 / 44,791]

Sequences

Amino acid sequence

Length: 1,258

>Harore.CG.MTP2014.S511.g11190.02.p
MATGGRRKQPHSGQKDLQNDDPSILSYSSSYPGNNQRHIQPTSTLKGSQSTGQRHRKQND
QTFHGRTNGNRNEQWKVDKNGELARDLFEAELNPWDKFDGQNKKSYQNEVPQNRSHRVNI
VPAVQKRGGNPSNVGPHQRGYKNSGRPETHDLNDVGKSEYPRNYRNNGRGPAHPDINRVH
PKVPETSEPNQMGNSTKADHRPRSYRNNGKEGSHPHHIPSYPGREETTPHDNKGMNKKNV
QFLQTLMGKNGKSEMKITVDSKTNGRKVDVNRLLSQNDMEQSSVPVEKMQTGDQVMSAPA
PSSGKDQIPVARIPIASNPNTSELTGEEIGKRKKKRVRKRNRKNKYERESQTSSLTEDVE
EDQGASHEAEVQKENNIATSSGVTDYETSTSASSKCNEETINVDPVQLPKAEQKEEEHPP
ASAEDTILQDAENKNPAPSSEEVGARKREELEMGLKQAELRLEKDQIFKLEKKSPTFPEA
IYFCQLCSHHLNTVAHAHRHIKDKRHKKEFKTKQQDELLQKLKPPPEEAINALEQLLQTV
IREKMMSPDDARERKEVVKRLHKVISEKLPGCPGCIPYARTCGVDLNSSSWWRPIFLDYC
SVALYGSSVTMISLKTSDINIELQFPDSMKTPTVLLSLLEILKNSEDFKDINEDFEAKVP
RIEITDKLSNLRCSLSANNVKALHTTRLLKIYGMIEPAVVKLSSLFRLWGKLCMVDQQTK
GSLPPHSFALMTIFFLQKKHGLAVLHEIMLDHDIEALLCSEAENCKQLELRDDGSWWYCP
TSPPRDKNKEKAGSREDEEDELEDPGEYSDSDLEIVFGESPQKKSYVDQLDSSTGGTSPS
KPIKTSLEPVKIPMCFDGSSQRLSDLWLEMLKFFSVQFDMENLVISIRYSSRVTRSDRGW
SHRRIAIEDPCSPKWNLCKPMNSQVLFSYFMMRLKHSVFYFHTAHNSARNNAKKVEPTTQ
TYANSDLPSRLSQGIVNAALTELKYRLQGREDHIASSSGSSLTAASKEEKPLNYLLCYKF
SRASLTEGNTPVTVCCICKHEGHSKKNCPDEVTVKVHPLPPLTERLKKILEEVCKEMFET
YMPREDEIAMRDHVCNKLLDYLKRNYDSKVEICLFGSSRNGFTFRGSDLDICMTFDGNLT
GEGLDFVQIIEDLAKVLRRDNALRQIIPITTAKVPIVKFYHPSTQLEGDISLYNLLAQRN
TKMLSLYSNIDERCRILGYAMKAFVKRCCIGDASRGSLSSYAYTLLVLYYLQQRNPPX

Nucleotide sequence

Length: 3,777

>Harore.CG.MTP2014.S511.g11190.02.t
ATGGCAACTGGAGGCAGAAGGAAGCAGCCTCATTCAGGCCAGAAAGATCTTCAGAATGAT
GATCCAAGCATTTTGAGTTACTCTTCATCTTATCCTGGAAATAATCAGAGACACATTCAA
CCAACAAGCACACTTAAAGGAAGTCAGTCAACCGGACAACGACATCGTAAACAAAATGAT
CAAACTTTTCACGGCAGGACGAACGGAAACCGAAACGAGCAGTGGAAAGTCGATAAAAAC
GGGGAACTTGCTCGAGATCTTTTCGAGGCCGAACTAAACCCATGGGACAAGTTCGACGGA
CAAAATAAGAAGAGTTATCAAAATGAGGTCCCCCAGAATCGATCACATCGCGTGAATATC
GTCCCAGCGGTACAAAAGAGGGGTGGAAATCCAAGTAATGTGGGCCCACACCAGAGGGGT
TATAAAAATAGTGGGAGACCGGAAACACATGATCTCAATGATGTGGGTAAATCGGAATAC
CCCAGAAATTACAGAAACAATGGGAGGGGACCGGCTCACCCTGATATTAATCGCGTTCAC
CCCAAGGTCCCAGAAACTTCTGAACCAAATCAAATGGGTAATTCAACAAAGGCAGATCAT
CGTCCTAGAAGTTACAGAAATAATGGAAAAGAGGGCTCTCACCCCCATCACATCCCCAGT
TACCCCGGGCGAGAGGAAACTACTCCTCATGATAATAAGGGTATGAATAAGAAAAACGTT
CAGTTCTTGCAAACGTTGATGGGGAAGAACGGAAAAAGCGAAATGAAAATAACCGTTGAC
AGCAAAACGAACGGGAGAAAAGTCGACGTCAATCGATTGCTCTCACAGAACGATATGGAA
CAATCATCAGTTCCTGTTGAGAAAATGCAGACAGGTGATCAAGTTATGAGTGCTCCAGCA
CCAAGCTCAGGAAAGGATCAAATTCCAGTTGCAAGGATTCCCATTGCTTCAAATCCTAAT
ACAAGCGAACTCACAGGAGAGGAGATTGGGAAGAGAAAAAAGAAAAGAGTGAGGAAGAGA
AATAGAAAAAATAAATATGAGAGAGAATCGCAAACTTCATCGCTCACTGAAGATGTTGAA
GAAGATCAGGGAGCATCCCATGAAGCTGAAGTGCAGAAGGAAAACAATATTGCAACATCA
AGCGGCGTCACAGATTATGAAACATCTACATCAGCATCCAGTAAATGCAATGAGGAGACG
ATCAACGTGGATCCGGTTCAACTTCCTAAAGCAGAACAAAAGGAAGAAGAACATCCTCCT
GCTTCTGCCGAAGACACGATTTTGCAAGATGCAGAAAATAAGAATCCTGCTCCATCGAGT
GAGGAGGTAGGTGCGAGGAAACGTGAAGAGCTCGAGATGGGACTGAAGCAAGCCGAGTTG
AGACTTGAAAAAGATCAGATATTCAAACTTGAAAAGAAATCTCCGACCTTCCCGGAAGCG
ATATATTTCTGTCAGCTGTGTTCTCATCATTTAAACACTGTCGCTCATGCTCACAGACAC
ATCAAGGATAAGCGGCACAAGAAAGAATTCAAAACAAAACAGCAGGATGAATTGTTGCAA
AAATTGAAACCTCCGCCTGAGGAAGCGATCAATGCTCTTGAGCAACTCCTACAGACTGTC
ATCAGAGAAAAAATGATGTCACCAGATGATGCTAGAGAGAGAAAAGAAGTTGTCAAGAGA
TTGCACAAAGTAATCAGTGAAAAACTTCCAGGTTGCCCAGGTTGCATTCCATACGCTAGG
ACCTGCGGTGTGGATCTAAATTCCTCATCATGGTGGAGACCGATATTTCTTGATTATTGT
TCTGTTGCACTGTATGGTTCTTCTGTGACCATGATCAGTTTAAAGACGAGTGACATCAAC
ATTGAACTTCAATTTCCCGACTCAATGAAGACTCCTACTGTTCTACTTTCCCTTCTTGAA
ATACTGAAGAATTCAGAGGATTTCAAAGACATAAACGAAGACTTTGAAGCCAAGGTCCCC
AGGATTGAAATCACAGATAAACTATCGAACCTACGCTGTAGTCTCAGTGCGAACAATGTA
AAGGCTTTGCATACGACACGACTGTTAAAAATATATGGAATGATCGAGCCAGCTGTTGTC
AAGCTCTCTAGTTTATTTCGTCTCTGGGGCAAGCTCTGCATGGTCGACCAACAAACAAAG
GGCTCACTACCACCGCATTCATTTGCATTGATGACCATTTTCTTCCTGCAAAAGAAGCAT
GGACTTGCAGTTTTACATGAGATCATGTTAGATCACGACATTGAAGCATTGCTCTGCAGC
GAAGCTGAGAATTGCAAACAGCTTGAATTAAGAGATGATGGGAGTTGGTGGTATTGTCCA
ACATCTCCACCCAGGGATAAGAATAAAGAAAAAGCTGGGAGCCGGGAAGATGAAGAGGAT
GAACTTGAAGATCCTGGTGAATATTCAGATTCCGACCTGGAAATAGTTTTCGGAGAATCG
CCGCAGAAGAAATCATACGTCGACCAATTAGATTCCTCGACAGGCGGGACTTCTCCCAGT
AAACCAATCAAAACGTCTCTCGAACCTGTCAAAATACCGATGTGTTTTGACGGCTCCTCA
CAGCGTCTCTCGGATCTCTGGCTTGAAATGTTGAAGTTTTTTTCCGTGCAATTTGATATG
GAGAACCTTGTGATATCAATCCGTTATTCATCTCGTGTGACACGCTCCGATCGCGGATGG
TCACATCGACGTATCGCGATCGAGGATCCTTGTTCCCCCAAATGGAATCTTTGCAAACCA
ATGAATAGTCAGGTACTTTTCTCCTACTTCATGATGAGACTCAAACATTCTGTCTTTTAC
TTCCACACCGCTCATAATTCGGCCAGAAACAACGCGAAAAAAGTCGAACCCACGACGCAA
ACATACGCGAACAGCGACCTGCCATCGAGGCTGTCGCAAGGAATCGTTAATGCAGCTTTG
ACCGAGCTCAAATACCGACTGCAAGGTCGTGAAGATCATATTGCATCATCATCAGGAAGT
TCTTTAACTGCTGCCTCGAAAGAAGAGAAACCGTTGAACTACTTGCTGTGTTACAAATTT
TCGAGAGCCTCGTTGACTGAAGGGAACACCCCGGTCACAGTTTGTTGCATTTGTAAGCAT
GAGGGTCACTCTAAGAAAAACTGCCCGGACGAGGTCACAGTCAAAGTTCATCCCCTACCC
CCACTGACAGAGCGCTTGAAGAAAATACTCGAAGAAGTCTGCAAAGAAATGTTCGAAACT
TACATGCCGAGAGAAGATGAAATTGCGATGAGGGATCATGTGTGCAATAAATTACTTGAT
TATTTGAAGAGAAATTACGATTCCAAAGTCGAGATATGCTTGTTCGGCTCCTCGAGGAAC
GGGTTTACATTTCGTGGCAGCGACTTGGACATTTGCATGACATTTGATGGAAATCTGACA
GGAGAGGGATTGGATTTTGTACAAATTATTGAAGATCTGGCGAAAGTTCTTCGAAGAGAT
AATGCGTTGAGACAAATCATTCCAATCACAACTGCTAAAGTTCCGATCGTAAAATTCTAT
CATCCATCAACCCAACTGGAAGGCGATATAAGTCTCTACAATTTATTGGCTCAAAGAAAT
ACAAAAATGCTCTCCTTGTACTCCAACATCGATGAACGTTGTCGGATCCTAGGCTACGCG
ATGAAGGCCTTTGTCAAGAGATGTTGCATCGGGGATGCATCAAGGGGATCTCTTTCTTCT
TATGCCTACACTCTTCTAGTTTTATATTACCTACAACAGAGAAACCCTCCTGNCTAA

InterProScan

ProSitePatterns
Znf_C2H2_type (IPR013087) - T[484-506] .
Pfam
PAP_assoc (IPR002058) - T[863-912] 4.1E-9
Pfam
Polymerase_NTP_transf_dom (IPR002934) - T[1096-1155] 9.5E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TUT4_HUMAN 55.967 % 284 3.73E-78
TUT7_HUMAN 53.942 % 273 8.66E-75
GLD2_HUMAN 31.282 % 85.5 4.95E-17