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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S6.g...' > 
  2. Transcript 'Moocci.CG.ELv1_2.S54...' > 
  3. Transcript 'KH2012:KH.L24.2.v2.B...' > 
  4. Transcript 'Harore.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S511.g11190.01.t

Possible name(s)

PAPD4; ZCCHC11; ZCCHC6

Gene model

Harore.CG.MTP2014.S511.g11190

Location

S511 [34,302 / 44,791]

Sequences

Amino acid sequence

Length: 1,230

>Harore.CG.MTP2014.S511.g11190.01.p
MATGGRRKQPHSGQKDLQNDDPSILSYSSSYPGNNQRHIQPTSTLKGSQSTGQRHRKQND
QTFHGRTNGNRNEQWKVDKNGELARDLFEAELNPWDKFDGQNKKSYQNEVPQNRSHRVNI
VPAVQKRGGNPSNVGPHQRGYKNSGRPETHDLNDVGKSEYPRNYRNNGRGPAHPDINRVH
PKVPETSEPNQMGNSTKADHRPRSYRNNGKEGSHPHHIPSYPGREETTPHDNKGMNKKNV
QFLQTLMGKNGKSEMKITVDSKTNGRKVDVNRLLSQNDMEQSSVPVEKMQTGDQVMSAPA
PSSGKDQIPVARIPIASNPNTSELTGEEIGKRKKKRVRKRNRKNKYERESQTSSLTEDVE
EDQGASHEAEVQKENNIATSSGVTDYETSTSASSKCNEETINVDPVQLPKAEQKEEEHPP
ASAEDTILQDAENKNPAPSSEEVGARKREELEMGLKQAELRLEKDQIFKLEKKSPTFPEA
IYFCQLCSHHLNTVAHAHRHIKDKRHKKEFKTKQQDELLQKLKPPPEEAINALEQLLQTV
IREKMMSPDDARERKEVVKRLHKVISEKLPDCSVALYGSSVTMISLKTSDINIELQFPDS
MKTPTVLLSLLEILKNSEDFKDINEDFEAKVPRIEITDKLSNLRCSLSANNVKALHTTRL
LKIYGMIEPAVVKLSSLFRLWGKLCMVDQQTKGSLPPHSFALMTIFFLQKKHGLAVLHEI
MLDHDIEALLCSEAENCKQLELRDDGSWWYCPTSPPRDKNKEKAGSREDEEDELEDPGEY
SDSDLEIVFGESPQKKSYVDQLDSSTGGTSPSKPIKTSLEPVKIPMCFDGSSQRLSDLWL
EMLKFFSVQFDMENLVISIRYSSRVTRSDRGWSHRRIAIEDPCSPKWNLCKPMNSQVLFS
YFMMRLKHSVFYFHTAHNSARNNAKKVEPTTQTYANSDLPSRLSQGIVNAALTELKYRLQ
GREDHIASSSGSSLTAASKEEKPLNYLLCYKFSRASLTEGNTPVTVCCICKHEGHSKKNC
PDEVTVKVHPLPPLTERLKKILEEVCKEMFETYMPREDEIAMRDHVCNKLLDYLKRNYDS
KVEICLFGSSRNGFTFRGSDLDICMTFDGNLTGEGLDFVQIIEDLAKVLRRDNALRQIIP
ITTAKVPIVKFYHPSTQLEGDISLYNLLAQRNTKMLSLYSNIDERCRILGYAMKAFVKRC
CIGDASRGSLSSYAYTLLVLYYLQQRNPPX

Nucleotide sequence

Length: 3,693

>Harore.CG.MTP2014.S511.g11190.01.t
ATGGCAACTGGAGGCAGAAGGAAGCAGCCTCATTCAGGCCAGAAAGATCTTCAGAATGAT
GATCCAAGCATTTTGAGTTACTCTTCATCTTATCCTGGAAATAATCAGAGACACATTCAA
CCAACAAGCACACTTAAAGGAAGTCAGTCAACCGGACAACGACATCGTAAACAAAATGAT
CAAACTTTTCACGGCAGGACGAACGGAAACCGAAACGAGCAGTGGAAAGTCGATAAAAAC
GGGGAACTTGCTCGAGATCTTTTCGAGGCCGAACTAAACCCATGGGACAAGTTCGACGGA
CAAAATAAGAAGAGTTATCAAAATGAGGTCCCCCAGAATCGATCACATCGCGTGAATATC
GTCCCAGCGGTACAAAAGAGGGGTGGAAATCCAAGTAATGTGGGCCCACACCAGAGGGGT
TATAAAAATAGTGGGAGACCGGAAACACATGATCTCAATGATGTGGGTAAATCGGAATAC
CCCAGAAATTACAGAAACAATGGGAGGGGACCGGCTCACCCTGATATTAATCGCGTTCAC
CCCAAGGTCCCAGAAACTTCTGAACCAAATCAAATGGGTAATTCAACAAAGGCAGATCAT
CGTCCTAGAAGTTACAGAAATAATGGAAAAGAGGGCTCTCACCCCCATCACATCCCCAGT
TACCCCGGGCGAGAGGAAACTACTCCTCATGATAATAAGGGTATGAATAAGAAAAACGTT
CAGTTCTTGCAAACGTTGATGGGGAAGAACGGAAAAAGCGAAATGAAAATAACCGTTGAC
AGCAAAACGAACGGGAGAAAAGTCGACGTCAATCGATTGCTCTCACAGAACGATATGGAA
CAATCATCAGTTCCTGTTGAGAAAATGCAGACAGGTGATCAAGTTATGAGTGCTCCAGCA
CCAAGCTCAGGAAAGGATCAAATTCCAGTTGCAAGGATTCCCATTGCTTCAAATCCTAAT
ACAAGCGAACTCACAGGAGAGGAGATTGGGAAGAGAAAAAAGAAAAGAGTGAGGAAGAGA
AATAGAAAAAATAAATATGAGAGAGAATCGCAAACTTCATCGCTCACTGAAGATGTTGAA
GAAGATCAGGGAGCATCCCATGAAGCTGAAGTGCAGAAGGAAAACAATATTGCAACATCA
AGCGGCGTCACAGATTATGAAACATCTACATCAGCATCCAGTAAATGCAATGAGGAGACG
ATCAACGTGGATCCGGTTCAACTTCCTAAAGCAGAACAAAAGGAAGAAGAACATCCTCCT
GCTTCTGCCGAAGACACGATTTTGCAAGATGCAGAAAATAAGAATCCTGCTCCATCGAGT
GAGGAGGTAGGTGCGAGGAAACGTGAAGAGCTCGAGATGGGACTGAAGCAAGCCGAGTTG
AGACTTGAAAAAGATCAGATATTCAAACTTGAAAAGAAATCTCCGACCTTCCCGGAAGCG
ATATATTTCTGTCAGCTGTGTTCTCATCATTTAAACACTGTCGCTCATGCTCACAGACAC
ATCAAGGATAAGCGGCACAAGAAAGAATTCAAAACAAAACAGCAGGATGAATTGTTGCAA
AAATTGAAACCTCCGCCTGAGGAAGCGATCAATGCTCTTGAGCAACTCCTACAGACTGTC
ATCAGAGAAAAAATGATGTCACCAGATGATGCTAGAGAGAGAAAAGAAGTTGTCAAGAGA
TTGCACAAAGTAATCAGTGAAAAACTTCCAGATTGTTCTGTTGCACTGTATGGTTCTTCT
GTGACCATGATCAGTTTAAAGACGAGTGACATCAACATTGAACTTCAATTTCCCGACTCA
ATGAAGACTCCTACTGTTCTACTTTCCCTTCTTGAAATACTGAAGAATTCAGAGGATTTC
AAAGACATAAACGAAGACTTTGAAGCCAAGGTCCCCAGGATTGAAATCACAGATAAACTA
TCGAACCTACGCTGTAGTCTCAGTGCGAACAATGTAAAGGCTTTGCATACGACACGACTG
TTAAAAATATATGGAATGATCGAGCCAGCTGTTGTCAAGCTCTCTAGTTTATTTCGTCTC
TGGGGCAAGCTCTGCATGGTCGACCAACAAACAAAGGGCTCACTACCACCGCATTCATTT
GCATTGATGACCATTTTCTTCCTGCAAAAGAAGCATGGACTTGCAGTTTTACATGAGATC
ATGTTAGATCACGACATTGAAGCATTGCTCTGCAGCGAAGCTGAGAATTGCAAACAGCTT
GAATTAAGAGATGATGGGAGTTGGTGGTATTGTCCAACATCTCCACCCAGGGATAAGAAT
AAAGAAAAAGCTGGGAGCCGGGAAGATGAAGAGGATGAACTTGAAGATCCTGGTGAATAT
TCAGATTCCGACCTGGAAATAGTTTTCGGAGAATCGCCGCAGAAGAAATCATACGTCGAC
CAATTAGATTCCTCGACAGGCGGGACTTCTCCCAGTAAACCAATCAAAACGTCTCTCGAA
CCTGTCAAAATACCGATGTGTTTTGACGGCTCCTCACAGCGTCTCTCGGATCTCTGGCTT
GAAATGTTGAAGTTTTTTTCCGTGCAATTTGATATGGAGAACCTTGTGATATCAATCCGT
TATTCATCTCGTGTGACACGCTCCGATCGCGGATGGTCACATCGACGTATCGCGATCGAG
GATCCTTGTTCCCCCAAATGGAATCTTTGCAAACCAATGAATAGTCAGGTACTTTTCTCC
TACTTCATGATGAGACTCAAACATTCTGTCTTTTACTTCCACACCGCTCATAATTCGGCC
AGAAACAACGCGAAAAAAGTCGAACCCACGACGCAAACATACGCGAACAGCGACCTGCCA
TCGAGGCTGTCGCAAGGAATCGTTAATGCAGCTTTGACCGAGCTCAAATACCGACTGCAA
GGTCGTGAAGATCATATTGCATCATCATCAGGAAGTTCTTTAACTGCTGCCTCGAAAGAA
GAGAAACCGTTGAACTACTTGCTGTGTTACAAATTTTCGAGAGCCTCGTTGACTGAAGGG
AACACCCCGGTCACAGTTTGTTGCATTTGTAAGCATGAGGGTCACTCTAAGAAAAACTGC
CCGGACGAGGTCACAGTCAAAGTTCATCCCCTACCCCCACTGACAGAGCGCTTGAAGAAA
ATACTCGAAGAAGTCTGCAAAGAAATGTTCGAAACTTACATGCCGAGAGAAGATGAAATT
GCGATGAGGGATCATGTGTGCAATAAATTACTTGATTATTTGAAGAGAAATTACGATTCC
AAAGTCGAGATATGCTTGTTCGGCTCCTCGAGGAACGGGTTTACATTTCGTGGCAGCGAC
TTGGACATTTGCATGACATTTGATGGAAATCTGACAGGAGAGGGATTGGATTTTGTACAA
ATTATTGAAGATCTGGCGAAAGTTCTTCGAAGAGATAATGCGTTGAGACAAATCATTCCA
ATCACAACTGCTAAAGTTCCGATCGTAAAATTCTATCATCCATCAACCCAACTGGAAGGC
GATATAAGTCTCTACAATTTATTGGCTCAAAGAAATACAAAAATGCTCTCCTTGTACTCC
AACATCGATGAACGTTGTCGGATCCTAGGCTACGCGATGAAGGCCTTTGTCAAGAGATGT
TGCATCGGGGATGCATCAAGGGGATCTCTTTCTTCTTATGCCTACACTCTTCTAGTTTTA
TATTACCTACAACAGAGAAACCCTCCTGNCTAA

InterProScan

ProSitePatterns
Znf_C2H2_type (IPR013087) - T[484-506] .
Pfam
PAP_assoc (IPR002058) - T[835-884] 4.0E-9
Pfam
Polymerase_NTP_transf_dom (IPR002934) - T[1068-1127] 9.2E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TUT4_HUMAN 35.611 % 299 3.02E-83
TUT7_HUMAN 35.01 % 278 9.67E-77
GLD2_HUMAN 31.282 % 85.1 5.99E-17