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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S50.g05827.01.t

Possible name(s)

FUT3; FUT5; FUT6

Location

S50 [234,397 / 239,231]

Sequences

Amino acid sequence

Length: 449

>Harore.CG.MTP2014.S50.g05827.01.p
MTSIPKSLALKLVLFGVILLSSGIFFLRSNPYGTLRLSMTKDNFRYKLHRFNITASTRTL
PDGYRPKILIWAKQYHVVNWKMLDFPNGEKGCDITWDRQEFSQSDALVFFMKSCSSKDLP
PSSLRSQYQAYVWWSQESPWTVRNYYYHDLKDFGNFFNWTMTYRTDSDVLGFFLPVSAMD
YVFNRINRTKDISKPNRLAVNYVMSDSQFESELDRLMSKKKKFISWVVSDCHITAGASKR
KTIVKNLKNIGLLQIDEFGECVGKSIPFNFTILFETLAPYKFYLAFENALHCKDYVTEKV
FYNSLTAGVVPIIFGPLRRDVEKILPPRSFIHMDDFPNYTELRIYLNYLDSNDTAYREYF
NWWRTPGAQLYPRYGFNYGSDPTKGIEFTKDGTRLWTYAVQDAGNDFERFGLYHLCRKLR
NMDHLKTKKTISDLHAVWYDVEPDICVNK

Nucleotide sequence

Length: 1,608

>Harore.CG.MTP2014.S50.g05827.01.t
AGTTATAGGAATTTTAACAAATTTTTGGAAGACGAAACATAATGACTTCGATACCCAAGT
CACTTGCTCTAAAGCTCGTGCTGTTCGGTGTGATTCTGTTATCCTCTGGCATCTTTTTCT
TACGAAGTAATCCTTACGGCACATTAAGGCTATCTATGACCAAGGATAATTTCCGGTACA
AACTTCATAGGTTTAACATTACCGCATCCACGAGAACACTGCCTGACGGTTACAGACCTA
AAATTTTGATTTGGGCCAAGCAGTATCACGTTGTCAATTGGAAAATGCTTGATTTTCCCA
ACGGCGAGAAGGGATGCGATATTACCTGGGATCGACAGGAATTCTCGCAGAGCGACGCTC
TTGTGTTTTTTATGAAGAGCTGTTCGTCAAAAGACCTTCCTCCTTCAAGTTTGAGAAGCC
AATACCAAGCATACGTTTGGTGGTCACAAGAGTCTCCATGGACCGTACGTAATTATTATT
ACCATGACCTCAAAGACTTTGGTAATTTTTTCAACTGGACAATGACATATCGTACTGACT
CAGACGTGCTTGGATTCTTTCTGCCTGTGTCAGCAATGGATTATGTATTCAACAGAATAA
ATAGAACTAAGGACATCAGTAAGCCGAATCGGTTAGCTGTTAACTATGTAATGTCGGATA
GCCAGTTCGAGTCTGAATTAGACCGGCTGATGTCAAAAAAAAAGAAATTCATTTCTTGGG
TTGTGAGCGATTGTCACATTACTGCTGGAGCTTCAAAACGTAAAACCATTGTGAAGAATT
TGAAAAACATAGGACTTTTACAAATAGACGAGTTTGGAGAATGTGTTGGAAAGAGTATAC
CATTCAATTTTACTATTCTTTTCGAAACACTGGCACCTTACAAGTTCTACCTTGCGTTCG
AAAATGCTTTACACTGTAAAGACTACGTCACGGAAAAGGTGTTCTACAATTCTTTGACAG
CAGGAGTTGTACCCATCATTTTCGGTCCCCTCAGACGGGACGTTGAAAAAATCTTGCCGC
CACGGTCATTCATACACATGGACGATTTTCCCAATTATACAGAACTACGAATTTATCTGA
ACTACTTGGATTCTAACGATACCGCTTACAGAGAGTATTTCAATTGGTGGAGGACTCCGG
GCGCTCAACTGTATCCGCGCTACGGTTTTAATTATGGATCGGACCCGACCAAGGGTATCG
AGTTTACAAAGGACGGGACTCGCTTATGGACCTATGCCGTTCAAGATGCGGGCAATGATT
TTGAAAGGTTTGGACTCTATCACTTATGTAGAAAATTGAGGAACATGGACCATTTGAAAA
CGAAGAAGACAATTAGCGATCTGCACGCCGTATGGTATGATGTTGAACCAGATATTTGCG
TCAATAAATGATAAGTAAACTGCCAGGCCAGGTTTTTGCAACTACGTTGCATTTAGTGGC
ACTGATGCTACAAACTTTAGTTGAGACAGTATTGAAATTTAATATTTCTACTCTTTTGTG
TGATTTAGTACTGTTGTTTTCAGATGTGTTTATTCTAGGCCAATGGTTCTCAAACTGAGT
CCCGCGTTCCCCAAGGGGTCCGTGAACAAAAAATACATTTTTAAGTTA

InterProScan

Pfam
Glyco_tran_10_N (IPR031481) - T[66-170] 1.4E-23
PANTHER
Glyco_trans_10 (IPR001503) - T[74-367] 3.8E-76
Gene3D
GT10-like_sf (IPR038577) - T[175-371] 5.9E-37
Pfam
Glyco_trans_10 (IPR001503) - T[220-368] 1.8E-45

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FUT3_HUMAN 31.988 % 134 2.38E-35
FUT5_HUMAN 33.452 % 135 6.23E-36
FUT6_HUMAN 32.459 % 137 1.43E-36