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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S503.g00017.03.t

Possible name(s)

CLIP1; CLIP2

Gene model

Harore.CG.MTP2014.S503.g00017

Location

S503 [1,774 / 8,110]

Sequences

Amino acid sequence

Length: 287

>Harore.CG.MTP2014.S503.g00017.03.p
MIRTEILLIKTFLALIAENEHRSKILVLEVDVANSKEDYCKLEEEHKLVTEAHNKLKSQQ
TKMEKRQVVLKSEFSKERDSLQQTIDITTALLEKKHEETEQYMHEIVILKKENASILTLQ
ESLETLEKEREMLQRELNSMKSSPIAGSSSTEDSGVGTDEEARGQVEFLNSVIVDQQKKI
SDLSGKISELEAMLLNGEDVDECEIDTEFYESEHKSHAAPRLFCDICDIFDAHDTEDCPT
QSMIDDVTSLPQTVHNAAQGEQRSYCDYCEIFGHWTEECTQEEEEMY

Nucleotide sequence

Length: 864

>Harore.CG.MTP2014.S503.g00017.03.t
ATGATTCGTACTGAAATATTATTGATAAAAACCTTTTTAGCGCTTATTGCAGAGAACGAG
CATCGAAGTAAGATACTTGTCCTCGAAGTAGATGTTGCGAACTCAAAAGAGGACTATTGC
AAATTGGAAGAAGAGCATAAGCTGGTCACTGAAGCACATAATAAGTTGAAATCACAGCAA
ACGAAGATGGAAAAAAGGCAAGTTGTACTGAAGTCTGAATTCTCTAAAGAAAGAGACTCG
TTGCAACAGACTATTGATATTACAACAGCACTTTTAGAAAAGAAGCATGAAGAGACTGAG
CAATATATGCACGAAATTGTTATTCTGAAGAAAGAAAACGCTTCAATCTTGACTTTGCAA
GAATCTTTGGAAACACTCGAGAAAGAAAGGGAGATGTTACAAAGAGAATTAAATTCTATG
AAATCCTCACCCATCGCTGGCTCTTCTTCAACAGAGGACAGTGGAGTGGGAACTGATGAA
GAAGCTAGGGGACAAGTTGAATTTTTGAATTCTGTAATTGTGGATCAGCAGAAGAAAATC
AGCGATTTATCCGGCAAGATTTCCGAATTAGAAGCGATGCTACTCAATGGAGAAGATGTG
GACGAGTGTGAAATCGACACTGAATTCTATGAATCAGAGCATAAGAGTCATGCTGCTCCG
CGACTATTCTGTGATATTTGTGATATTTTTGATGCTCACGACACTGAAGATTGTCCAACT
CAGTCCATGATTGATGATGTAACATCTTTACCTCAAACAGTGCACAATGCTGCTCAAGGA
GAGCAGAGATCATATTGTGACTATTGTGAAATATTTGGTCACTGGACAGAAGAATGCACA
CAAGAAGAAGAAGAAATGTATTGA

InterProScan

Pfam
CLIP1_ZNF (IPR032108) - T[221-238] 2.0E-7 - T[263-279] 2.0E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CLIP1_HUMAN 37.959 % 169 2.93E-47