- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'Phfumi.CG.MTP2014.S8...' >
- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S4.g08850.01.t
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
S4 [441,100 / 442,688]
Amino acid sequence
Length: 378
>Harore.CG.MTP2014.S4.g08850.01.p
MEDEEEEQTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHNVPIYEGYALPHAIMR
LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLE
KSYELPDGQVITIGNERFRCPETMFQPSFIGMESSGVHETTYNSIMKCDIDIRKDLYANN
VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
TKQEYDEAGPSIVHRKCF
Nucleotide sequence
Length: 1,137
>Harore.CG.MTP2014.S4.g08850.01.t
ATGGAAGACGAAGAAGAAGAACAAACCGCGCTGGTATGCGACAACGGTTCAGGTCTTGTA
AAGGCCGGTTTTGCAGGAGATGACGCACCAAGAGCTGTGTTTCCATCAATTGTCGGTCGA
CCCAGGCATCAGGGAGTCATGGTTGGTATGGGACAAAAAGACAGCTATGTAGGTGATGAA
GCTCAAAGCAAAAGAGGTATCCTTACACTGAAATATCCCATCGAACACGGTATCATCACC
AACTGGGACGATATGGAGAAAATCTGGCATCACACCTTCTACAACGAACTCAGAGTTGCC
CCAGAAGAGCACCCAGTCCTCCTCACGGAAGCGCCACTGAATCCTAAAGCCAACCGTGAA
AAAATGACCCAAATCATGTTCGAAACCTTCAACGTTCCAGCGATGTACGTTGCTATTCAG
GCTGTACTTTCACTGTACGCCTCCGGCAGAACAACAGGTATCGTTCTTGATTCTGGCGAT
GGTGTCTCCCACAACGTGCCAATCTATGAAGGTTACGCGCTCCCTCACGCCATCATGCGT
TTGGATTTGGCCGGTCGCGATCTCACTGACTATCTGATGAAAATCCTCACGGAACGTGGT
TACTCTTTCGTAACAACAGCTGAACGTGAAATCGTGCGTGACATCAAAGAAAAACTTTGC
TATGTTGCTCTCGACTTCGAACAAGAGATGGCAACAGCTGCTTCCTCATCTTCCCTCGAG
AAGAGCTACGAACTTCCCGACGGTCAAGTCATCACTATCGGTAACGAAAGGTTCCGTTGC
CCAGAGACCATGTTCCAGCCATCTTTCATCGGTATGGAATCATCTGGAGTTCATGAAACT
ACTTACAATTCCATCATGAAGTGCGACATTGATATCCGTAAGGACTTGTACGCCAACAAC
GTCCTTTCCGGAGGTACCACTATGTATCCTGGTATTGCTGACCGTATGCAGAAAGAAATT
ACCGCCCTTGCTCCAAGCACCATGAAGATTAAGATCATCGCACCTCCCGAGAGGAAGTAC
TCCGTCTGGATCGGAGGTTCCATTCTTGCATCTCTCTCAACCTTCCAACAGATGTGGATC
ACTAAGCAAGAATACGACGAGGCCGGACCTTCCATCGTCCACAGGAAATGCTTCTAA
| PANTHER |
Actin (IPR004000) - T[4-377] 5.0E-268 |
| Pfam |
Actin (IPR004000) - T[6-378] 3.4E-149 |
| SMART |
Actin (IPR004000) - T[8-378] 1.1E-237 |
| PRINTS |
Actin (IPR004000) - T[29-38] 6.7E-58 - T[52-63] 6.7E-58 - T[64-86] 6.7E-58 - T[118-131] 6.7E-58 - T[143-162] 6.7E-58 - T[239-255] 6.7E-58 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[56-66] . - T[359-367] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[107-119] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 97.067 % | 769 | 0 |
| ACTS_HUMAN | 97.333 % | 771 | 0 |
| ACTC_HUMAN | 97.333 % | 770 | 0 |