- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S4.g04053.01.t
Possible name(s)
EMX1; MEOX1; VAX1
Gene model
Location
S4 [205,612 / 206,914]
Amino acid sequence
Length: 433
>Harore.CG.MTP2014.S4.g04053.01.p
MISYRHPFQTVANSTQGIVSFAPNQQYYGISPLFCMPAASKRPMSPDELRQEYLNRLTPQ
QTRSNSTETVSPTPSECSSISSVNKDSISIKTKIDTTQETRRAKKRTLFTIDAILGTDSS
SDEITPANKRRKFEPEFKVEQSIPEECKSFDSGVSSCFGADSSESSFAHSSGISCGDNDL
SPVSTKSSSRTHSIIAGNNTTPLPAQPMFNSHLQPTIYSQPWVMAPGLANSQDTYMSAMM
GNYLLQTRTDPRSLHKDAIYPHANSTPISRTHMAVNPGAPITTVGLPYLNGLHAPSSHWP
SPIPQGKQFSDENQTVGQRRSSMENVQRRNVGQSEAKAKRLRTIFTPEQLERLEREFLKQ
QYMVGTERFYLAKELNLGEAQVKVWFQNRRIKWRKQKHAGELNNKSPYTSVTKSKFDILK
EEADEPAQGVTNE
Nucleotide sequence
Length: 1,302
>Harore.CG.MTP2014.S4.g04053.01.t
ATGATTTCTTACCGTCATCCTTTCCAAACCGTCGCTAATTCGACACAGGGAATTGTTTCT
TTTGCACCGAACCAACAATATTATGGAATATCGCCGCTCTTCTGCATGCCTGCTGCATCG
AAACGACCAATGTCACCCGACGAACTCCGACAGGAATACCTCAACAGACTTACACCACAA
CAAACTCGTTCGAATTCGACCGAGACTGTGTCGCCTACCCCTTCAGAATGCTCTTCGATA
TCTTCCGTCAACAAAGATTCCATTTCCATTAAAACAAAGATTGATACAACTCAGGAAACA
AGACGTGCTAAAAAACGCACTCTCTTCACCATAGATGCTATCCTGGGAACCGACAGTTCT
AGCGACGAAATAACTCCTGCCAACAAAAGAAGAAAGTTTGAACCTGAATTTAAAGTGGAA
CAATCGATTCCAGAGGAATGTAAATCCTTTGATTCCGGAGTATCTTCCTGTTTTGGAGCT
GACAGTTCTGAAAGCAGTTTCGCACATAGCAGTGGAATTAGTTGTGGAGATAACGATCTA
TCTCCGGTTTCAACCAAGTCAAGCTCGAGAACGCATTCGATTATTGCCGGGAACAATACA
ACTCCCTTGCCAGCGCAGCCAATGTTTAACTCCCATCTGCAACCGACTATTTACAGTCAA
CCATGGGTGATGGCACCCGGATTAGCTAATTCTCAGGATACGTACATGTCTGCGATGATG
GGCAATTATTTATTGCAAACAAGGACGGATCCTAGAAGCCTTCATAAAGATGCCATATAC
CCTCACGCAAATTCGACGCCAATTTCCAGAACACATATGGCTGTAAATCCTGGAGCTCCT
ATTACAACCGTTGGTCTACCTTATCTCAACGGCCTACACGCACCATCATCTCACTGGCCA
AGTCCAATTCCACAAGGAAAACAATTTTCTGATGAAAATCAGACAGTTGGTCAGCGAAGA
AGTTCAATGGAGAATGTTCAACGTAGAAATGTTGGTCAGTCGGAAGCTAAAGCAAAAAGA
CTGCGAACCATTTTCACTCCCGAGCAACTAGAAAGACTGGAACGCGAGTTTTTGAAACAG
CAGTACATGGTCGGTACTGAAAGATTTTATCTCGCCAAAGAATTGAACCTCGGTGAGGCG
CAAGTCAAGGTTTGGTTCCAGAACAGGAGAATCAAGTGGCGTAAGCAAAAGCACGCTGGA
GAATTGAACAACAAAAGTCCTTACACCAGTGTTACGAAGTCCAAATTCGATATTCTAAAA
GAAGAAGCTGATGAACCGGCGCAAGGTGTCACCAACGAGTAA
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[336-396] 20.342 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[336-398] 2.65E-22 |
| SMART |
Homeobox_dom (IPR001356) - T[338-400] 1.8E-24 |
| Pfam |
Homeobox_dom (IPR001356) - T[339-395] 2.6E-21 |
| CDD |
Homeobox_dom (IPR001356) - T[339-397] 7.05807E-22 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[371-394] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| VAX1_HUMAN | 53.571 % | 82.4 | 2.43E-17 |
| EMX1_HUMAN | 62.295 % | 79.7 | 7.11E-17 |
| MEOX1_HUMAN | 43.023 % | 80.1 | 4.72E-17 |
