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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S494.g05306.01.t

Possible name(s)

CSTF2; CSTF2T; TRNAU1AP

Gene model

Harore.CG.MTP2014.S494.g05306

Location

S494 [31,284 / 34,151]

Sequences

Amino acid sequence

Length: 168

>Harore.CG.MTP2014.S494.g05306.01.p
MSRSLWMGDLEPYMDETFIQYVFQAVSSQVVSVKAIKRRDTGQPAGYCFIEFRTEEEAER
ILKTVNGKEIPGTTPTRRFRLNRAQGGKNWDNGNLVGILNIANALEQAGPNGWSKLYLLA
SSYPDPPLDIQAENEIFMREHSGFIDDVVDCHWQPLDTITAKIPELPA

Nucleotide sequence

Length: 507

>Harore.CG.MTP2014.S494.g05306.01.t
ATGTCGCGATCTCTTTGGATGGGCGATCTGGAGCCTTACATGGACGAAACATTTATACAA
TACGTGTTTCAAGCGGTCAGTAGTCAAGTTGTGTCGGTAAAGGCAATAAAAAGACGTGAT
ACCGGTCAACCGGCTGGTTATTGCTTCATTGAATTCAGGACTGAGGAAGAAGCGGAGCGT
ATACTGAAAACGGTCAATGGGAAGGAAATTCCTGGAACCACACCAACGAGGCGATTCCGT
TTGAACAGAGCTCAAGGAGGAAAAAATTGGGATAATGGCAATTTAGTTGGAATTCTAAAT
ATCGCTAATGCTTTGGAACAGGCTGGTCCAAACGGCTGGTCCAAGCTTTACCTACTAGCT
TCGAGTTATCCTGATCCTCCTCTGGACATACAGGCTGAAAACGAGATTTTCATGCGAGAA
CATTCTGGTTTCATAGACGATGTTGTGGATTGCCACTGGCAACCTCTTGATACAATTACA
GCAAAAATTCCCGAACTGCCCGCGTGA

InterProScan

Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[1-85] 2.4E-22
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[2-89] 3.8E-16
ProSiteProfiles
RRM_dom (IPR000504) - T[3-86] 13.805
SMART
RRM_dom (IPR000504) - T[4-78] 1.3E-10
Pfam
RRM_dom (IPR000504) - T[5-74] 2.6E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TSAP1_HUMAN 56.522 % 112 8.16E-31