- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S492.g15253.02.t
Possible name(s)
KHDRBS2; QKI; SF1
Gene model
Location
S492 [35,900 / 43,331]
Amino acid sequence
Length: 813
>Harore.CG.MTP2014.S492.g15253.02.p
MSRKSFTGANAVPLGPRNPAIGAKRTFSAEPPPASYNQPSPFPIKHEENKVSSNAAAALR
AAQAAAANLAKLQKKVAELTPIKQEEIPDESRGRPRKKRSRWGTPEVKTNIPGIPAIIPA
NLTKDQQKAYIVQLQIEDLTRKLKSGDLGISPNPEDRFESKKLSAEHSTAEREYPLCLPS
FYVDLLVRSVGSGLSNSSTLQSPRKFNSIFFNMTQSSFNDNNSLTITAYRKIDFNNTGGS
KLSKKDCGKCLFATENIPSTLSPCLRSPSPEPIYNNEGKRLNTREYRTRKKLEEDRHKLI
QDMMRLNENYKAPMDYKPPVQRISEQIVIPSDLNPSINFVGLLIGPRGNTLKKIEKESQC
KIMIRGKGSVKEGKIGRKDGMPLPGEDEPLHALVTGMTIESVQKAVKEIHAIIKQGIEQP
EGQNDLRKLQLMELARLNGTLRDDALPREREWLKPENQNITNTTVCTKCGGRGHLVQDCL
SQAPSVGLQQEANSADGEPVNEVDKAKMDSEYMSLMAELGEGPVSSGGNSAGNKDNSNQQ
FGGDQFSGPRAPWMGQRGPGYGGPMGYNGPPGNYNPPNMMGGPNVRPPPWMRGDNRGRGG
NYGPRGGGRGSGHQGYGYQGYPQGNMQWMGQYDGGMGYGNMDGSNMGMGGHMGNMMNPPP
PPPNSAPQQPPLPPGSSGGPSSNWQQQSWGANSSDGDGQEPPGESKSTESSNNNEYEGGN
GMQNNQMGGYGNMMGYGMWGGMGNMNSGGMGQPPMPSGPGPVPPPPPSNGNESGQSGNAN
QQWGGNMEYNNMMGMGMMGFGMPPAPPPPPPST
Nucleotide sequence
Length: 2,442
>Harore.CG.MTP2014.S492.g15253.02.t
ATGTCACGGAAGTCCTTCACAGGGGCGAACGCCGTTCCCCTCGGACCGCGGAATCCCGCT
ATAGGGGCCAAACGAACGTTTTCTGCCGAACCCCCACCGGCCAGCTACAATCAACCTAGT
CCGTTCCCTATAAAGCATGAAGAAAATAAAGTGAGTTCGAATGCAGCAGCTGCCTTACGT
GCAGCTCAAGCAGCAGCTGCTAATCTGGCGAAACTACAGAAGAAAGTAGCAGAATTAACT
CCAATAAAACAAGAAGAAATCCCGGACGAAAGCCGCGGTCGTCCAAGGAAGAAACGAAGT
CGATGGGGCACGCCTGAGGTGAAGACGAATATCCCTGGAATTCCTGCGATCATTCCCGCT
AATCTGACAAAGGATCAGCAAAAAGCCTATATAGTGCAGCTCCAGATCGAAGATTTGACA
AGAAAATTGAAATCAGGCGACCTAGGCATCTCGCCCAACCCAGAAGACAGGTTTGAGAGT
AAAAAATTGAGTGCCGAGCACTCGACAGCAGAACGGGAGTATCCGTTATGCCTTCCTAGT
TTTTATGTCGATCTTTTGGTTCGGTCCGTTGGTTCCGGCCTCAGCAATTCATCTACGCTG
CAGTCACCCAGAAAATTTAACTCGATTTTCTTTAACATGACACAAAGCAGTTTTAATGAT
AATAATTCTCTTACCATTACAGCATACAGAAAAATTGATTTCAACAATACAGGAGGTTCG
AAATTGAGTAAAAAAGATTGCGGTAAATGTTTATTTGCGACTGAAAATATCCCATCCACA
TTATCGCCCTGTCTGAGATCACCTTCTCCAGAACCGATCTATAACAACGAGGGTAAGAGG
TTGAACACGAGAGAATACAGAACCAGGAAGAAACTAGAAGAAGACAGACATAAGCTTATC
CAAGATATGATGAGATTGAATGAAAATTACAAAGCTCCGATGGACTACAAACCACCGGTT
CAAAGAATAAGCGAACAAATTGTGATTCCGTCTGATTTGAATCCAAGTATTAATTTTGTT
GGATTGCTGATCGGACCAAGAGGAAATACTTTGAAAAAAATAGAAAAAGAATCCCAATGT
AAGATCATGATTCGAGGGAAAGGTTCTGTGAAAGAAGGGAAGATTGGAAGAAAGGATGGA
ATGCCGCTACCTGGCGAAGACGAACCATTACATGCTCTCGTTACTGGAATGACAATCGAG
AGTGTCCAGAAGGCAGTGAAAGAAATTCATGCAATTATTAAACAAGGAATTGAGCAGCCG
GAAGGGCAAAATGATTTACGGAAATTGCAACTGATGGAATTGGCGAGACTGAATGGTACA
CTACGAGATGATGCTTTGCCAAGAGAACGTGAGTGGCTTAAACCTGAGAATCAAAATATC
ACTAACACCACCGTGTGTACAAAATGTGGAGGACGTGGACATCTCGTTCAGGATTGCTTG
TCGCAGGCTCCCAGTGTCGGTCTTCAACAGGAAGCAAATTCTGCCGACGGTGAGCCTGTG
AATGAAGTTGATAAAGCAAAAATGGACAGCGAGTACATGTCACTCATGGCTGAACTTGGT
GAAGGTCCAGTGTCATCTGGTGGTAACAGCGCAGGGAATAAAGATAACAGCAATCAACAA
TTTGGTGGAGATCAGTTCAGTGGACCCAGGGCACCGTGGATGGGACAAAGAGGACCTGGA
TATGGAGGTCCCATGGGATACAATGGACCGCCTGGAAATTATAATCCGCCGAATATGATG
GGCGGCCCCAATGTAAGACCCCCACCTTGGATGAGAGGAGATAATCGTGGTAGAGGGGGT
AATTATGGTCCCAGAGGAGGAGGTAGGGGTTCTGGACACCAAGGTTATGGTTATCAAGGA
TATCCACAAGGTAATATGCAATGGATGGGTCAGTATGATGGTGGTATGGGTTATGGAAAC
ATGGATGGATCTAACATGGGTATGGGTGGTCACATGGGTAATATGATGAATCCTCCACCT
CCTCCACCAAATTCTGCTCCCCAACAACCCCCTCTTCCTCCTGGTTCGTCAGGTGGCCCG
TCATCCAACTGGCAACAGCAGTCTTGGGGAGCAAACTCTTCTGATGGAGATGGACAGGAG
CCACCAGGAGAAAGTAAATCGACTGAGTCATCAAATAACAATGAATATGAAGGTGGCAAC
GGAATGCAGAATAATCAAATGGGAGGATATGGCAATATGATGGGTTACGGTATGTGGGGA
GGAATGGGTAACATGAATTCAGGAGGAATGGGTCAACCCCCGATGCCATCAGGACCCGGT
CCGGTTCCTCCTCCGCCACCAAGCAACGGGAACGAGTCCGGTCAATCTGGGAATGCCAAC
CAGCAGTGGGGCGGCAATATGGAATATAACAATATGATGGGTATGGGCATGATGGGGTTC
GGAATGCCCCCTGCCCCTCCTCCACCACCCCCATCAACGTGA
| PANTHER |
BBP/SF1 (IPR031150) - T[44-674] 3.5E-143 - T[657-811] 3.5E-143 |
| Pfam |
SF1-HH (IPR032570) - T[99-160] 7.9E-11 - T[263-317] 1.1E-22 |
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[261-447] 5.5E-52 |
| SMART |
KH_dom (IPR004087) - T[321-414] 6.5E-11 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[323-441] 1.29E-24 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[326-410] 5.6E-9 |
| ProSiteProfiles |
Znf_CCHC (IPR001878) - T[466-479] 9.109 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SF01_HUMAN | 65.672 % | 350 | 2.0E-110 |
| QKI_HUMAN | 35.165 % | 92.4 | 3.88E-20 |
