Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Harore.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S490.g04992.01.t

Possible name(s)

CCDC50

Location

S490 [23,346 / 30,322]

Sequences

Amino acid sequence

Length: 535

>Harore.CG.MTP2014.S490.g04992.01.p
MSRNPVIETKNLPAVNEAVKEYRVIEDGAYAYHLQEKEIENHYAQNVSVRRTVMDDIQQA
KALQDEEDRKARILTLDEQGELELMDEELAGLIQEDIYKRNLQEAEERKGRERSDQEVAL
LLEEKERRRIEHAKSAMEQDRAIAKRLEKVRVTPSPEGNQHEQRMKLMSDEELARRLQQE
EKFRVQQEKKKKENIKSVIEMQDEELAKYIHERDVEAAEIKFGRKKSKKKGKWKEEPLYY
DDNFHPPPPQYQEVPPPSRKNGRDKKGPNRPPPPKFSAAHVTEVKVPLDSSQIQHRQHNS
PRRRPDLAENGRHSPHDRHQAYSEKHSRSSDDLVDRADQHERRPPHDRRNVHSEKHSRRR
GSADELDQHRSSSERHRNLQTPQDGRRVHDQPSRARHPPDSRDVDPRNHRHNEPQRSHGH
TQEDPWHIREDRPPRRPDPGPRRPDPQSRTPRDKKTKEKKVGNKHRLNLLTLSGCRTNSS
LVLINLFVAEQWTDDELNYNEDFTRLTEEELAHHNNNNIEHNKPRKKSKGECTQQ

Nucleotide sequence

Length: 2,262

>Harore.CG.MTP2014.S490.g04992.01.t
CATGATTGGGTGATTAGGTAACCCTGAAGCGATCCTTTCTAAAGAAACTCCGGCGGTTCA
CGTACCCTTGGTGAATTTAGGCGAGATATATTGTTTATTTATTATTCGATAAAAAATTGA
TTCGGAAAGACTTATGAGCTCTGAATTATCCAATACACCTGGAATAGCTTTGGAACTTTC
TTAGGGCCTTCAACATGAGTAGAAATCCCGTAATTGAAACGAAAAATCTTCCTGCAGTTA
ACGAAGCTGTCAAAGAATACAGAGTGATTGAAGATGGAGCATACGCATATCATTTGCAAG
AGAAAGAAATTGAAAATCATTATGCGCAAAATGTCTCTGTGCGTCGCACGGTTATGGACG
ATATCCAACAGGCGAAAGCTCTTCAAGATGAAGAGGACAGGAAGGCAAGAATCCTTACAC
TGGATGAACAAGGAGAATTAGAATTGATGGATGAAGAACTGGCTGGATTGATTCAGGAAG
ACATTTACAAAAGGAATCTTCAAGAAGCGGAAGAGAGAAAAGGAAGGGAAAGGAGTGATC
AAGAGGTTGCATTATTACTTGAGGAAAAAGAAAGACGTCGGATTGAACATGCGAAGTCAG
CGATGGAACAAGATCGTGCGATCGCAAAAAGACTTGAGAAGGTTCGTGTGACACCATCGC
CAGAAGGTAATCAACACGAACAACGAATGAAGCTCATGTCTGATGAGGAACTTGCCCGAC
GACTCCAACAGGAAGAAAAATTCAGAGTACAGCAGGAAAAAAAGAAAAAGGAAAATATCA
AATCGGTGATTGAAATGCAGGATGAGGAACTTGCAAAATATATTCATGAAAGAGACGTCG
AAGCAGCCGAGATAAAGTTTGGCAGAAAGAAAAGTAAGAAAAAGGGGAAATGGAAAGAGG
AACCTCTGTATTACGATGATAATTTTCATCCACCACCACCACAATATCAAGAAGTTCCTC
CACCATCACGAAAGAACGGGAGGGACAAAAAGGGACCAAACCGGCCCCCTCCTCCCAAGT
TTTCTGCCGCTCACGTGACTGAGGTGAAAGTGCCATTGGATTCTAGTCAAATACAACACA
GACAACATAATTCACCTAGGCGTCGACCAGATCTTGCAGAAAATGGAAGACATTCTCCAC
ACGATCGGCATCAGGCATACAGCGAAAAACACAGCCGATCATCTGATGATCTAGTAGATC
GTGCCGATCAACATGAAAGACGTCCTCCTCATGATCGACGTAACGTTCATAGCGAAAAAC
ACAGCAGACGTAGAGGATCTGCTGATGAATTAGATCAACACAGAAGTAGCAGTGAGCGAC
ACAGGAATTTACAGACACCACAAGATGGCAGAAGAGTACATGATCAGCCATCCCGAGCAC
GACATCCTCCTGACAGCAGAGATGTAGATCCGAGGAATCATCGACACAATGAGCCACAGA
GGTCGCACGGTCACACGCAGGAGGATCCATGGCATATTAGAGAAGATCGTCCCCCTCGTA
GACCAGACCCTGGGCCTCGCAGACCTGATCCACAATCAAGAACACCACGAGATAAGAAAA
CAAAAGAGAAAAAAGTCGGTAACAAGCATCGTTTGAATCTTCTCACTCTGTCTGGTTGTA
GGACAAACTCTAGTTTGGTTCTTATAAACCTTTTTGTGGCAGAACAATGGACAGATGATG
AATTGAATTACAATGAAGATTTTACTAGATTGACGGAGGAGGAACTTGCTCATCACAATA
ATAATAACATTGAACATAATAAGCCCAGGAAAAAGAGTAAAGGTGAGTGTACACAACAAT
AAATATAGCATGGGAATCGTGATTGTTCAACGTGTCAATCGACTTCGAAGGAACAAAATC
TCGAAGACGTGTTCCTTACGAGTGAATATCCCAGACATCGACGAGAGCCAATTCTGATTA
TACCCGCTTATTTGATGATACTATGATTTGATAGAATTTACCGCATTACGTTTATTGCTG
CGATGTTTTTAGCCCGAGGGCATAAAGATATTTTCTATAATTCGGTTTTCATACCCCTGG
GATTACACATTCCAGAGTTAACAATAAAAAGTATTGTTTTAATCAAAGATGGAGTACCAA
TATTAGGCATTTAGTTAGGTTTGGTACACCGCCAAATATGTTGAATCTAAATCTATACGG
TCTGTGATTGCTACAACCGTGAGTTATTGTGGGTAATTTAAATATTTAAAGGAGGCAAAC
CTGATTTGTAAGTATAGTACAGGAATTTGCAAATAGCAACTA

InterProScan

Pfam
CCDC50_N (IPR029311) - T[7-132] 2.6E-32

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CCD50_HUMAN 33.101 % 88.2 3.31E-19