- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S48.g07442.01.t
Possible name(s)
CRIM1; SPON1; VWCE
Gene model
Location
S48 [324,303 / 334,539]
Amino acid sequence
Length: 667
>Harore.CG.MTP2014.S48.g07442.01.p
EIIKRIPNNSVEMFYASSFILLITSLIQTVQTTNALKNDDAYENFLLTHGPGNPSDNEES
AGFLSSLDEGFNLEHPTEEQKRGHLPMDERFFSFDPVSGEVESTTRSRRKTPRRHYGQRK
HKNSVTNFSHGPPGFKPKELPTEIPASTELQMKRVDTEFMRWNTENKVHVDQCQRGHMSG
ETTWKVSSCITCKCEGSEVVCTRPECPKLKCPNQIRLPGECCPQCPEKLCESDDGRRFKH
GAEWHMGDCTFCECNEGKTLCSVEDCQIAACKNPVRGISQTINSAIFVAVPGQCCPVCLD
TTCKASNGTVIPAGEVWKEGVCMHCYCAGGERKCAKEKCPYINCTDAYTPDGKCCQRCKT
GLIDCIVTNWGFWSECPVQECGGGMRRRFRNTLIPSRNGGQFCPHRSEAQMCPRLPCEIL
PVCPVTDWTGWSLCTATCGYGHRMRSRGRTAVNKATMTSLIDCSQTHMQETMRCYAGACV
PLDQLRGGLHEMALYDDICYDVKWAEWGDCSVACGLGSQRRHQVLIDESHPRGHLCHLLD
EKRKCFGQKCFGPQAVRCKMSSWGHWTQCSKTCGSDRTRTRTRKVITEPTHGGRPCPNLT
VTKSCKSKTCPNAYTQRQQPRTNNVRFKKQRIVQSCTKKMGILNGQLSGYRKYFSPLIGI
LKARLQT
Nucleotide sequence
Length: 2,822
>Harore.CG.MTP2014.S48.g07442.01.t
AGAAATTATTAAACGCATACCTAACAATAGTGTCGAAATGTTCTACGCGTCGAGTTTTAT
TCTATTAATTACTTCACTCATACAAACGGTCCAAACCACGAATGCATTGAAAAACGACGA
CGCATATGAAAATTTTCTGTTGACTCATGGACCTGGAAATCCGAGCGACAACGAGGAATC
TGCCGGATTTCTTTCGTCTTTAGACGAGGGTTTTAATCTAGAACACCCGACAGAAGAGCA
AAAGAGAGGTCATCTTCCTATGGACGAAAGATTTTTCTCGTTTGATCCCGTCAGTGGGGA
AGTGGAGAGTACGACGCGCAGTAGAAGAAAAACACCCCGTCGCCATTACGGACAGAGAAA
GCATAAAAATTCCGTGACAAATTTCTCGCATGGACCTCCAGGATTTAAACCTAAAGAGCT
ACCGACTGAGATTCCCGCTTCGACCGAACTGCAGATGAAAAGAGTGGACACGGAATTCAT
GAGATGGAACACGGAGAACAAAGTTCATGTGGATCAATGTCAGCGCGGTCATATGTCGGG
TGAAACTACGTGGAAGGTTTCAAGTTGTATAACATGTAAATGCGAAGGATCTGAAGTCGT
CTGCACGCGACCTGAATGCCCAAAGCTTAAGTGTCCGAATCAAATAAGACTACCGGGTGA
ATGTTGTCCACAATGTCCAGAAAAACTGTGCGAGTCTGACGATGGACGACGTTTCAAACA
TGGGGCAGAATGGCATATGGGAGACTGTACCTTTTGTGAATGCAACGAAGGAAAAACGTT
GTGTTCTGTGGAAGATTGTCAAATAGCGGCATGCAAAAACCCGGTCAGAGGCATATCGCA
AACAATTAACTCTGCTATTTTTGTCGCAGTTCCCGGACAATGCTGCCCAGTGTGTCTAGA
CACGACATGTAAGGCATCAAACGGTACTGTTATTCCAGCAGGCGAAGTCTGGAAAGAAGG
TGTATGCATGCATTGTTATTGCGCCGGAGGGGAACGGAAATGCGCTAAAGAAAAATGTCC
CTACATAAACTGCACTGACGCCTACACGCCCGACGGGAAATGTTGTCAAAGATGTAAAAC
AGGTTTAATCGACTGCATTGTAACGAACTGGGGTTTTTGGAGCGAGTGTCCAGTGCAAGA
ATGCGGCGGAGGGATGCGCAGGCGATTCCGTAACACGCTAATACCGTCTCGGAACGGCGG
TCAATTTTGTCCTCATCGTAGCGAAGCACAAATGTGCCCCAGGCTGCCGTGTGAAATACT
TCCTGTTTGTCCGGTGACAGACTGGACTGGTTGGAGTCTTTGTACGGCAACGTGCGGGTA
CGGTCACAGAATGCGATCACGTGGGAGAACAGCAGTTAACAAGGCAACCATGACGTCACT
TATCGACTGTTCACAAACACACATGCAAGAAACGATGCGTTGTTACGCCGGGGCGTGCGT
ACCTCTAGATCAGTTACGAGGAGGACTTCATGAAATGGCCCTATACGACGACATATGCTA
CGATGTGAAATGGGCGGAGTGGGGAGATTGTTCGGTAGCATGTGGCCTTGGATCTCAAAG
ACGTCATCAGGTATTGATCGACGAGTCTCACCCCAGGGGTCACCTGTGCCACCTACTCGA
CGAAAAGCGGAAATGTTTTGGGCAAAAATGCTTCGGTCCTCAAGCCGTACGTTGCAAAAT
GTCATCCTGGGGTCATTGGACCCAATGCTCTAAAACGTGCGGATCGGACCGGACTCGTAC
GAGAACGAGGAAAGTAATAACGGAGCCAACACACGGTGGAAGACCTTGTCCAAATCTGAC
TGTAACGAAATCCTGTAAATCTAAGACTTGTCCGAACGCATATACCCAACGTCAACAACC
GAGAACAAATAATGTTCGCTTCAAAAAACAACGCATCGTGCAGTCATGCACAAAGAAAAT
GGGAATTTTAAATGGGCAATTGTCCGGTTATAGGAAATATTTTTCTCCTCTCATTGGAAT
TTTAAAGGCGAGACTACAGACTTAGGTGTCAGCAACGCCATGTTTTGGCATTATAAACTA
ATAACGTCGCCAATAATTCTCGCTCCGATGAAAAACAAAAGTCTCTATTGAAGAGAAAGG
TATCTTCTCATTGTCTCTGCCTTACATTTGCTGACACGGATTACAAAAGCATTACCTGCT
GTCGCTCAAAAATACATTAGTTCTCTTCGCTCCAACCGCATTGACATTTAAGTTAAACAT
ACACGGCTCAGTTCCTTTGTTTCGTCTTCTTACTACTTTCTACGAAATTATCACTGCCAG
CGAATCCCAAGCTCAAGTTTCGCGTAGGTACACAATTTTTATTAACTCGAAAATTCAATT
ATGCAGACAGGGTGATTCGTCACGTGATAGCATGATGATATTTATCAGTTATTTACAACA
TACAAAATCTAAACTATATTTATTACTTTACATTTCGGATTTAGACTTATCGAGGCTCAA
AACTAGATAAACCCTCTACGGCGCCTTGTTAAGAAAATTAATGTAACTCGGGGTAGACCT
AAAAACAATGACGAATTTTGCGTATTTAATAACGTGGAATTTAAAGAGTAAAACACCGAG
TATTTTTCCAATTGAATACATTTACTGATTAGATATTTATCACTTTACTGACCTGAAATT
TGAAAAATATCTTAAAATTTACGGGATTCGTAAGATTTTAAGTTCTATCCTGGCACTGAT
TATGAAACTTTTTATGGTTCTATTTAAATTCTACTAATTTCTTTTCCAGTTCTATGTTTT
TTTTGTATATACATTAGACATGCTTTATATCTGTTACTGCATTGGAAGTAAAGTAGTATT
TT
| SMART |
VWF_dom (IPR001007) - T[172-225] 0.006 - T[230-298] 1.1E-8 - T[303-358] 7.9E-5 |
| Pfam |
VWF_dom (IPR001007) - T[181-225] 1.8E-8 - T[234-298] 1.5E-7 - T[303-358] 9.8E-7 |
| ProSiteProfiles |
VWF_dom (IPR001007) - T[183-226] 9.443 - T[228-299] 10.699 - T[301-359] 10.308 |
| ProSitePatterns |
VWF_dom (IPR001007) - T[189-225] . - T[322-358] . |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[363-412] 5.5E-12 - T[422-479] 7.5E-8 - T[498-550] 2.6E-7 - T[556-606] 6.1E-12 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[363-412] 7.72E-8 - T[423-479] 3.14E-7 - T[499-550] 4.19E-7 - T[555-610] 2.22E-8 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[364-418] 9.941 - T[422-480] 9.867 - T[497-551] 8.837 - T[557-611] 11.046 |
| SMART |
TSP1_rpt (IPR000884) - T[367-418] 3.4E-8 - T[425-480] 4.2E-5 - T[502-551] 5.5E-6 - T[560-611] 2.7E-7 |
| Pfam |
TSP1_rpt (IPR000884) - T[369-417] 4.6E-6 - T[427-451] 2.0E-4 - T[503-550] 1.4E-7 - T[561-610] 6.9E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CRIM1_HUMAN | 29.744 % | 85.1 | 4.9E-17 |
| SPON1_HUMAN | 27.985 % | 93.6 | 9.51E-20 |
