- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S48.g00094.01.t
Possible name(s)
AC004223.3; RFFL; RNF34
Gene model
Location
S48 [64,629 / 65,676]
Amino acid sequence
Length: 348
>Harore.CG.MTP2014.S48.g00094.01.p
MPCRYCEVSFSIIKWKNKCQTCSCTFCTNCIVDKRCLACHHVLDSRLNPDELLKIKIKDL
KIFSTTRGYEVSTCKEKYELVNLIRRKAGLSTDGCTGHVKQSAPTSYPTQNIHKPSMSQT
YYTHPSDVPVVNEAPNSVQINPNSSDVPQPPDYTFTQYMFPSANEYLNVTSASNDNMSET
NQTLPMSPPLEETSTVKADENKQSPNNASSNDTPPIPIPTGLGGKLLITDIKFASQIKPL
SPRQLKQILADNFVDYKGCVEKSELLKKVTDLYEDMQKNEARLAEEKSGASQVNSDEDNT
CRICWDKPIDCVLLECGHMATCTACGKKLNECPFCRQYVVRCVHVFRS
Nucleotide sequence
Length: 1,047
>Harore.CG.MTP2014.S48.g00094.01.t
ATGCCTTGCAGATACTGCGAAGTTAGTTTTTCAATCATCAAATGGAAAAACAAGTGTCAG
ACATGTTCCTGTACCTTCTGTACCAACTGTATTGTAGACAAAAGATGTTTAGCCTGTCAT
CACGTTCTTGACTCGAGACTGAACCCAGATGAATTATTGAAAATCAAGATCAAGGATTTG
AAGATATTCTCTACAACGAGGGGTTATGAAGTAAGCACTTGCAAAGAAAAGTATGAACTG
GTCAATTTGATTCGTAGAAAGGCCGGGCTATCTACGGACGGATGCACGGGACATGTGAAA
CAGTCCGCTCCAACATCTTATCCTACCCAAAACATCCATAAGCCATCAATGTCTCAAACT
TATTATACACATCCATCAGATGTTCCTGTTGTTAATGAAGCTCCTAATTCAGTACAGATC
AATCCGAATTCAAGTGATGTCCCCCAACCGCCAGATTATACATTCACCCAATACATGTTT
CCGTCTGCTAATGAGTACCTGAATGTAACTAGTGCCTCGAACGATAACATGAGTGAGACC
AATCAAACCCTTCCAATGTCACCTCCTCTTGAAGAAACGTCAACTGTAAAGGCTGATGAA
AACAAACAGTCTCCCAACAATGCAAGTAGCAACGACACACCACCAATACCAATACCCACG
GGTCTTGGTGGTAAACTTTTGATAACGGATATAAAGTTTGCATCGCAGATTAAACCCCTT
TCTCCGCGACAGTTAAAGCAGATATTAGCAGACAACTTTGTGGATTACAAGGGATGCGTT
GAAAAGAGCGAGCTTTTGAAAAAGGTCACAGACCTGTACGAAGACATGCAGAAAAATGAG
GCTAGACTGGCAGAAGAAAAGAGCGGAGCTTCGCAAGTGAACTCGGACGAAGACAACACG
TGCAGGATATGCTGGGACAAGCCGATCGATTGTGTGTTGCTCGAATGTGGACACATGGCA
ACTTGTACGGCTTGTGGTAAGAAATTAAACGAGTGCCCCTTTTGTAGACAATATGTAGTA
AGATGCGTACATGTATTTCGAAGCTAG
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[2-61] 1.58E-5 |
| SMART |
Znf_RING (IPR001841) - T[3-39] 18.0 - T[301-335] 0.0075 |
| SUPERFAMILY |
SAP_dom_sf (IPR036361) - T[49-86] 1.92E-5 |
| PIRSF |
E3ligase_BOI_like (IPR017066) - T[100-226] 99.0 - T[243-348] 3.9E-8 |
| Gene3D |
SAP_dom_sf (IPR036361) - T[231-284] 1.4E-5 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[285-348] 2.3E-15 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[301-336] 10.984 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RFFL_HUMAN | 35.028 % | 184 | 3.45E-55 |
| RNF34_HUMAN | 56.637 % | 135 | 1.64E-36 |
