- Transcript 'Phfumi.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C3.697.v3....' >
- Region 'REG00000404' >
- Transcript 'Cisavi.CG.ENS81.R9.3...' >
- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S479.g10963.01.t
Possible name(s)
GAA; MGAM; SI
Gene model
Location
S479 [44,393 / 49,672]
Amino acid sequence
Length: 737
>Harore.CG.MTP2014.S479.g10963.01.p
MLRIIILAAICIYRTNAYSAATCPSTIAETDRVDCYSSSGANEADCLDAGCMWCETSDYN
NPNSYPWCFYDSPTIPEEGECTSCTCTSKVDCYPQPGSSEEGCLGRGCIWCPSNIQGVPW
CIVGSGGDVSPDSGMCSGIQESKRLDCYPESGASEQGCYSRECFWCETNTPNIPWCFYNT
TDPSEIPDGGGNTGNSGSCPTTIPENSRIDCWPGSGATSSGCVNSGCIWCASNTEGVPWC
FFNTTDLPPGIEDSERINCIPEGGFNPTACSERGCQFASIGSPAAPLCYFPSDYGYVMVG
DPIETQTGYSINLQRVSSGTVFGDDVDSLTLTFDFDSDHRLHWKFFDDSNGRFEVPLPIN
GASTKTAANPLYDVTFSNDPTFSFKIIRKSTGAVLWDTSLGGLTFSDQFLQIATRIPEGA
SVYGFGETEHAALLHKFDWSAWGMYARDQPPAGVGNLYSVFPFYVAIEQDANSHGVLLLN
SNAQDITFTPAPGLLYRTIGGVLDFYMFLGPEPNTVIEQYSLAVGPSFFPPYWSLGFQLC
RYGYGDLATVKTTVNEMNAYNIPQDVQYGDIDYMDEQRDFTYSLTNYDGLPDYVKELQAE
GKHYVIILDDPPGAYPPYERGFEKEVYVKNAKGADLTGKVWPPGESVFPDYSNPDTVDWW
SNECQLFHGVIPFDGLWIDMNEPANFGTGSTTGCETNSLNNPPYHPLIWGDVLADKTICP
DSMHAMGTHYDTHSLYG
Nucleotide sequence
Length: 3,261
>Harore.CG.MTP2014.S479.g10963.01.t
ATGTTAAGGATTATCATCCTCGCAGCTATCTGTATTTACAGGACAAATGCATACTCTGCT
GCAACATGCCCTTCTACGATAGCAGAGACAGACCGCGTGGATTGTTACTCGTCATCAGGC
GCAAACGAAGCAGATTGCCTTGACGCAGGATGCATGTGGTGCGAAACAAGCGACTACAAC
AATCCGAACAGCTATCCTTGGTGTTTCTACGATAGTCCAACAATTCCAGAGGAGGGAGAA
TGTACGTCTTGCACATGCACTAGTAAAGTGGACTGCTATCCACAACCTGGTTCAAGTGAG
GAAGGATGCCTTGGCAGAGGTTGCATATGGTGCCCTAGTAATATCCAAGGGGTTCCGTGG
TGCATCGTGGGATCCGGAGGAGACGTTAGTCCTGACTCTGGCATGTGTTCTGGGATACAA
GAGAGTAAACGACTGGATTGCTACCCGGAATCCGGTGCTAGTGAACAGGGATGTTACTCG
AGAGAATGCTTTTGGTGTGAGACGAATACTCCTAATATACCGTGGTGTTTTTACAATACC
ACTGATCCAAGTGAAATACCAGATGGCGGAGGGAATACTGGAAATAGCGGGAGTTGTCCA
ACTACCATTCCGGAAAATTCTCGAATAGACTGTTGGCCGGGTAGTGGTGCCACCTCGAGT
GGTTGCGTGAATTCAGGATGCATATGGTGTGCAAGTAATACAGAAGGCGTTCCGTGGTGC
TTTTTCAATACTACGGACCTGCCTCCTGGCATTGAAGACAGTGAGAGGATCAATTGCATA
CCTGAGGGCGGGTTCAATCCAACTGCATGCAGCGAAAGAGGATGTCAATTTGCATCCATA
GGTTCTCCTGCAGCACCGTTGTGCTACTTCCCGAGCGATTATGGTTATGTCATGGTTGGC
GATCCCATAGAAACACAGACGGGTTATTCAATCAACTTGCAAAGAGTGTCATCTGGTACT
GTTTTCGGAGACGATGTTGATTCGTTAACATTGACCTTTGACTTTGACTCCGATCACAGA
TTACATTGGAAATTCTTTGACGATTCCAACGGACGATTTGAAGTCCCACTCCCAATCAAT
GGAGCATCAACAAAAACGGCAGCAAATCCCTTGTACGATGTGACCTTCAGCAATGATCCA
ACCTTCTCCTTCAAGATTATCCGTAAATCAACCGGGGCTGTGCTGTGGGATACTTCTCTA
GGTGGACTGACGTTTAGCGACCAATTCTTGCAAATAGCCACTAGAATTCCAGAAGGAGCA
TCAGTTTATGGATTTGGAGAAACGGAGCACGCCGCTTTACTGCATAAGTTTGATTGGAGC
GCTTGGGGTATGTATGCGAGGGATCAGCCACCTGCGGGAGTCGGAAATTTGTACAGCGTT
TTCCCCTTCTACGTCGCTATTGAACAAGATGCAAATTCTCATGGAGTTCTACTACTAAAT
TCCAATGCACAAGATATAACATTCACGCCGGCACCCGGACTTTTATACCGTACGATTGGC
GGAGTCCTGGATTTCTACATGTTTCTTGGTCCCGAACCAAACACAGTCATCGAGCAATAC
AGTTTAGCTGTTGGTCCTTCTTTCTTCCCTCCATATTGGTCACTTGGATTTCAGCTATGT
CGTTACGGGTACGGCGATTTGGCAACAGTTAAAACGACAGTGAATGAAATGAATGCCTAC
AATATACCACAGGATGTACAATATGGCGACATCGATTACATGGACGAACAACGCGACTTC
ACATACAGTCTAACCAACTACGATGGACTTCCAGATTACGTCAAAGAACTCCAGGCAGAG
GGTAAACACTACGTTATAATTCTAGACGATCCACCAGGAGCTTACCCACCATACGAACGA
GGATTTGAAAAAGAAGTCTACGTTAAAAATGCTAAGGGTGCTGATCTCACAGGAAAGGTA
TGGCCACCAGGCGAAAGCGTCTTCCCAGACTATTCAAATCCAGACACTGTGGATTGGTGG
TCAAACGAATGCCAGCTATTTCACGGTGTAATACCTTTCGACGGGCTCTGGATTGACATG
AACGAACCGGCCAATTTTGGCACTGGTAGCACAACTGGTTGTGAAACTAACAGTTTAAAC
AATCCACCTTACCATCCATTGATTTGGGGAGATGTGCTGGCCGATAAAACAATATGTCCC
GACTCTATGCATGCGATGGGCACGCACTATGATACACACAGTCTTTACGGATGAGCCGCT
ATTGATTCTACCGGCAAACGACCATTCGTCGTCTCTCGCAGTACTTTCCCTGGCTCTGGT
CAATGGTCGGCTCACTGGCTCGGCGACAACAACGCAGATTGGTCTGACTTGAAAAATTCA
ATCATTGGAATGCTGGAATTCAATATGTTTGGAATACCCTACGTGGGTGCTGATATCTGC
GGATTCAATGGCGCCCCCTCGGAGGAGCTTTGTGCCAGATGGATGGAACTCGGTTCGTTT
TATCCTTACGCGAGGAACCACAATGGAATTGGTTACCCACGGCAGGATCCGGCGGCATTC
GGTGCCCAGTTTGCTGCTAATTCCAGGGAAGTTCTCAACATAAGATACACTCTGTTGCCA
TATCTGTATACATTGTTCTATTACGCTAACGTAAAAGGTAGCAGTGTCGTACGCCCTCTT
TCATTTGAATTTACTTCGGATATTAACACCATGGCCATCGATGAACAATTTATGTGGGGA
GGAGGATTGTTGTTCTCTCCAGTCCTATATGAAGGATTGAAATCAGTGGACGCTTATTTC
CCAGATGCTCCATGGTTTGACTATTCAACCGGAAAACCAGTTGGCACTAGAAGCGCGTCA
AAATCGATTCCAGCAGATATTGGTACAATTCCCATCCATGTCCGAGGGGGATTTATAATT
CCAACTCAGGATCCGGCTGTGAACACCGTTCAATCCAGGAATAATCCATTTGGACTCATT
ATAGCACTCGGCGATGACGGGACTGCTCATGGAACTCTTTATTGGGACGATGGTGATTCT
TTGGATGTCATCTCTAAAGGACACTACGCCTTGCTCGAATTTTCTGCTGCAAACTCTAAG
TTGACGACTGCCGTCTTAAACGATGACAACATCGCAGAAACCATGGTGATGGGAACCCTC
CGTATATTCGGAGTTTTAAAATCTCCAAGTGCAGTTACAGTCAACGGAATTTCTCAGTCT
TTTACTTACAGTAATGAGGTGATACAGGTCACCAACCTCCTTGATAAGCTCTCAGCAGAT
TACACGGTAGATTGGTCATAA
| ProSiteProfiles |
P_trefoil_dom (IPR000519) - T[21-72] 13.085 - T[79-125] 12.031 - T[134-180] 14.055 - T[197-244] 13.971 - T[243-292] 10.809 |
| SMART |
P_trefoil_dom (IPR000519) - T[21-75] 0.17 - T[84-124] 0.0091 - T[134-183] 2.6E-8 - T[197-247] 2.5E-4 - T[250-295] 0.018 |
| Pfam |
P_trefoil_dom (IPR000519) - T[27-70] 1.9E-7 - T[81-121] 2.5E-5 - T[136-179] 2.1E-9 - T[202-243] 2.3E-9 - T[252-291] 9.9E-8 |
| CDD |
P_trefoil_dom (IPR000519) - T[27-70] 0.00670087 - T[89-121] 9.65208E-5 - T[141-180] 3.30206E-5 - T[203-244] 5.04981E-6 - T[250-291] 0.001509 |
| SUPERFAMILY |
Gal_mutarotase_sf_dom (IPR011013) - T[285-513] 8.47E-35 |
| Pfam |
Gal_mutarotase_N (IPR031727) - T[308-417] 2.4E-30 |
| Pfam |
Glyco_hydro_31 (IPR000322) - T[506-737] 2.3E-52 |
| SUPERFAMILY |
Glycoside_hydrolase_SF (IPR017853) - T[516-683] 6.02E-24 - T[718-736] 6.02E-24 |
| ProSitePatterns |
Glyco_hydro_31_AS (IPR030458) - T[675-682] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MGA_HUMAN | 43 % | 428 | 2.16E-131 |
| SUIS_HUMAN | 39.848 % | 386 | 7.67E-117 |
| LYAG_HUMAN | 39.771 % | 387 | 6.51E-122 |