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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S46.g04767.01.t

Possible name(s)

MRPL44

Gene model

Harore.CG.MTP2014.S46.g04767

Location

S46 [101,495 / 102,848]

Sequences

Amino acid sequence

Length: 413

>Harore.CG.MTP2014.S46.g04767.01.p
MQCIRILRSQVKSLDSVISKLSFNQVQSFENRRWFHADVSLKSPRSKVIGDKNYQPYFQD
KLAPPRWKHFWLLMMRRKAEIEGEEEIIPRSDRVNWNYEAELLAFTHRLSLNITTDVLKV
AFTEPITDKYSGDGEAEGTHNGDLVTTGKDFLNFFINFYIRKVFPLITGDCLKSIVVYMT
SENLLSDLAQNLGHADLIQSSEFPITPPILKRSFLATIGAILTGDNGRIEAARFISDFVI
AEMMDKDIVHDIWRPKNPMKVLVEELKTRKMPSPEIRLTRQSGITTVLPVYFIGIFLDKK
LFVESGGETVTKAETDAAKLALKKLYGVSGQRYMPNFNLLDDPNIRQELQRQTHKYDDRE
FPPKLVGKRCQICIISNMKNIHVIFDGTHTQVWRRLISVILLSNSTGFKYFII

Nucleotide sequence

Length: 1,242

>Harore.CG.MTP2014.S46.g04767.01.t
ATGCAGTGCATTAGAATATTACGGTCACAAGTAAAGTCACTCGATTCGGTTATCAGTAAG
CTCTCCTTCAATCAAGTACAATCGTTTGAAAACCGACGTTGGTTCCACGCAGATGTAAGC
CTCAAAAGTCCTAGATCCAAAGTCATTGGCGATAAGAATTACCAACCTTATTTTCAAGAT
AAACTTGCACCGCCGAGATGGAAGCACTTTTGGTTACTGATGATGAGAAGAAAAGCTGAG
ATCGAAGGTGAAGAGGAAATTATACCCAGGTCAGACCGGGTCAACTGGAATTATGAAGCA
GAGCTATTAGCCTTCACACATAGACTATCTCTCAACATTACAACGGATGTATTGAAAGTA
GCTTTCACTGAACCAATCACTGATAAATACAGTGGTGATGGAGAAGCTGAAGGGACCCAT
AACGGTGATCTGGTTACAACAGGCAAAGACTTCCTGAATTTTTTCATTAATTTTTATATC
AGAAAAGTATTCCCACTAATAACAGGCGATTGTCTCAAAAGCATTGTTGTATATATGACA
TCAGAAAACTTGTTGTCCGATCTGGCTCAGAATCTTGGTCATGCAGATCTCATACAAAGT
TCAGAGTTTCCAATCACACCACCCATTTTAAAAAGATCTTTTTTAGCGACCATTGGAGCC
ATATTGACAGGCGATAATGGGAGGATTGAGGCGGCACGCTTCATTTCGGATTTCGTGATC
GCGGAAATGATGGATAAAGACATCGTGCACGACATCTGGCGTCCGAAAAACCCGATGAAA
GTATTAGTGGAAGAACTAAAGACAAGAAAAATGCCTTCGCCCGAGATCAGATTAACAAGA
CAGTCTGGAATAACGACCGTACTTCCTGTATACTTCATTGGCATTTTCCTTGATAAAAAA
TTATTTGTAGAATCTGGGGGCGAGACTGTTACGAAAGCTGAAACTGATGCTGCCAAATTG
GCTTTGAAAAAATTGTATGGAGTCAGTGGTCAAAGATATATGCCGAATTTCAATCTCTTA
GATGATCCGAACATAAGACAAGAACTTCAGAGACAAACACATAAGTATGATGACAGAGAA
TTTCCTCCAAAACTAGTAGGCAAAAGGTGTCAAATATGCATCATTTCAAATATGAAAAAT
ATCCACGTCATTTTTGACGGGACGCATACACAAGTCTGGAGAAGGCTTATTTCGGTCATT
TTACTGAGCAACTCCACCGGTTTCAAATACTTCATAATATAA

InterProScan

Gene3D
RNase_III_sf (IPR036389) - T[73-203] 5.3E-10
SUPERFAMILY
RNase_III_sf (IPR036389) - T[102-248] 2.01E-9
ProSiteProfiles
dsRBD_dom (IPR014720) - T[257-327] 9.101

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RM44_HUMAN 39.163 % 187 4.4E-56