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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S15....' > 
  2. Transcript 'KH2012:KH.C2.216.v1....' > 
  3. Transcript 'KH2012:KH.C2.216.v1....' > 
  4. Transcript 'KH2012:KH.L141.11.v4...' > 
  5. Transcript 'Harore.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S46.g01709.01.t

Possible name(s)

NSMCE1

Gene model

Harore.CG.MTP2014.S46.g01709

Location

S46 [99,497 / 101,470]

Sequences

Amino acid sequence

Length: 362

>Harore.CG.MTP2014.S46.g01709.01.p
MEYGWEKGVAIAICSTAANNNSVSILTPRSGEFIFVITVKFNDVSYLLLMITEMSMAHSE
CQKYFLQAIMQKGAVTKLEFQLLLKKCCEATDEDYRSVDAQSFVSSINKQIQSVHLEIRK
GQKEDDGSEIYALITTTDQEINQLAVGGDFSKGEIEIFRRTVDLIVSSSTGMVSSTEILN
LTDELSQRNISKSDAEVLITNLVKQQWLDEKDGIVFLAPRTVLELEPYIKSDLKEFIIYC
GICKSMVFRGITCPSCSGKIHHYCASTYFRGRSQSDCKCPTCHGPMPTTSLSPVSPTESV
NGELNGTNDSHSASKALVRNFICKDTWMSVADISYAGTSTSQTNYFWRNCKCGIRIGGKH
NR

Nucleotide sequence

Length: 1,089

>Harore.CG.MTP2014.S46.g01709.01.t
ATGGAGTATGGATGGGAAAAAGGGGTTGCTATTGCTATATGTTCTACTGCTGCAAATAAC
AATTCAGTTTCAATTTTGACACCCAGAAGCGGTGAATTTATATTTGTGATCACTGTGAAG
TTTAATGACGTTTCCTATTTACTATTAATGATTACTGAAATGTCGATGGCGCACAGCGAA
TGTCAAAAATATTTCTTGCAAGCTATTATGCAAAAGGGAGCCGTCACCAAACTGGAATTC
CAATTGTTACTGAAGAAATGTTGCGAAGCAACAGATGAAGACTACAGAAGCGTGGACGCG
CAGTCATTTGTCTCGTCCATTAACAAACAAATCCAGTCTGTTCATTTAGAAATTAGAAAA
GGGCAGAAGGAAGATGATGGCAGTGAAATCTATGCGCTCATCACCACTACAGATCAGGAG
ATTAACCAGTTGGCGGTCGGAGGTGACTTTTCCAAAGGAGAGATAGAAATATTCAGGCGT
ACGGTCGATCTTATCGTCAGCTCGTCCACTGGGATGGTTTCGTCAACTGAAATCCTCAAT
CTCACAGATGAGTTGTCACAGAGAAATATATCCAAGTCCGATGCTGAGGTACTCATCACC
AACCTTGTGAAGCAGCAATGGCTGGATGAGAAAGACGGGATTGTCTTTCTAGCTCCGCGC
ACTGTGTTAGAACTCGAACCCTACATTAAATCAGACTTGAAGGAATTTATTATCTACTGT
GGCATTTGTAAGAGCATGGTGTTCAGAGGAATAACCTGCCCTTCCTGTTCTGGTAAAATA
CACCACTATTGTGCCTCAACTTATTTTCGCGGTAGGTCCCAATCCGACTGCAAATGTCCC
ACATGCCACGGTCCAATGCCAACCACGTCCCTTTCTCCCGTGAGTCCTACAGAGAGCGTA
AATGGCGAGTTGAATGGTACGAATGACAGTCACTCTGCCTCGAAAGCATTAGTCAGAAAT
TTTATTTGTAAAGACACATGGATGAGTGTTGCAGATATTTCATATGCCGGTACTAGTACG
TCCCAAACCAATTATTTTTGGAGGAACTGCAAGTGTGGTATTCGGATTGGTGGTAAGCAC
AATCGGTGA

InterProScan

PANTHER
Nse1 (IPR011513) - T[53-308] 2.3E-64
Pfam
Nse1 (IPR011513) - T[62-225] 2.9E-21
Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[139-237] 5.8E-25
Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[239-294] 3.1E-11
Pfam
Znf_RING-like (IPR014857) - T[240-282] 2.8E-7
CDD
Znf_RING-like (IPR014857) - T[240-282] 9.08296E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NSE1_HUMAN 33.188 % 160 7.89E-47