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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S46.g01235.01.t

Possible name(s)

ATG10; ATG3

Location

S46 [94,507 / 97,184]

Sequences

Amino acid sequence

Length: 258

>Harore.CG.MTP2014.S46.g01235.01.p
MQNVFNSVKSSALGVAEMLTPVLKASKFKDTGVLTPDEFVVAGDFLVHHCPTWQWASGDR
SKTKSYLPPEKQYLITRNVSCHKRCKEIEYNNENEALIDEQDGDGGWVDTHHNYTSEVGK
MQDEVKEMTMSEKKDSKHDDDEDSDDDNDEALDMEDFAEKLEADDDDRKPLTMKQMYEDI
SQDHVNKTVTIEPHPHLPPPNMCSVHPCRHAEVMKKIMQTVESGGGQLEVQMYLLVFLKI
VQAVIPTIEYDYTRHFTL

Nucleotide sequence

Length: 1,067

>Harore.CG.MTP2014.S46.g01235.01.t
GTTTAATTGCATGTAATAATTCACACAGTAAGTTTCTTATTCAGTTAAATTGTAAATAGA
AAACAGAGTAGAGAGCAAACTTTAAAATGCAAAACGTATTTAATTCGGTTAAAAGCAGTG
CGTTAGGCGTTGCAGAGATGCTAACACCCGTTCTCAAGGCTTCAAAGTTCAAAGATACCG
GAGTTTTGACACCAGATGAATTTGTTGTTGCTGGAGATTTTTTAGTTCATCACTGCCCAA
CGTGGCAATGGGCATCCGGAGACAGATCAAAGACGAAATCGTATTTGCCTCCTGAAAAGC
AGTATTTAATTACCCGAAATGTATCATGCCACAAAAGATGCAAGGAAATAGAATACAATA
ATGAAAACGAAGCTCTCATTGATGAACAGGATGGAGATGGTGGTTGGGTGGATACACATC
ACAATTATACTAGCGAGGTCGGAAAGATGCAAGATGAAGTGAAAGAGATGACAATGTCAG
AAAAAAAAGATTCGAAGCATGATGACGATGAAGACTCGGATGATGACAATGATGAAGCTC
TGGACATGGAGGACTTTGCAGAAAAACTAGAGGCTGATGATGATGACCGTAAACCTCTCA
CAATGAAACAGATGTATGAGGACATCAGCCAAGATCACGTCAATAAAACAGTTACCATAG
AACCACACCCACATTTACCCCCTCCAAACATGTGTTCGGTGCATCCATGCAGGCATGCCG
AGGTAATGAAGAAAATCATGCAAACTGTGGAGAGTGGCGGAGGTCAATTGGAAGTTCAGA
TGTATCTCCTTGTTTTCCTCAAAATAGTCCAAGCAGTCATACCTACGATTGAATACGACT
ACACAAGGCATTTTACATTGTAATAGTAATGAGTTGGATCAAACATTTATATGCAAAAGA
AATGAGCATGCTGAGATAATTATTATAAGAACCCACTTCATATATGAAGACATCTTGTAT
AGATCCTAAATCAGATGTACGGATGGATGATGCATTGTAGCTTTTCATTTTTTTCCTGAT
TGTTATGTAAATAGTGAAATTATATTACTACTGTAATAAATGAATAT

InterProScan

Pfam
Autophagy-rel_prot_3_N (IPR007134) - T[8-146] 4.6E-51
Pfam
Autophagy-rel_prot_3 (IPR007135) - T[164-209] 4.5E-8
Pfam
Autophagy-rel_prot_3_C (IPR019461) - T[230-253] 2.2E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ATG3_HUMAN 53.165 % 326 7.48E-113