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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S460.g03186.02.t

Possible name(s)

Harore.CG.MTP2014.S460.g03186

Gene model

Harore.CG.MTP2014.S460.g03186

Location

S460 [18,827 / 25,783]

Sequences

Amino acid sequence

Length: 1,553

>Harore.CG.MTP2014.S460.g03186.02.p
MHSHSRHSRTMPDRGYGGRYDSQTSSAAPRKGRGKMSNQPSSGSDFTVSDNSRYRDWNNQ
HRSEDGSSYSSAESYGTDTEETENTPRRNKSRDHRRNYDYNGRYYPDPMENVELRRVQSG
YSQDTSTATDTTMTNGDDREKDIDELANYFNRRLEDMQKQTSSMTTDDPRTGRGYPPRDP
YPDDITSTYSYNRNRLDGDPVSQRDSGNRTIRPTNRAISSTSEMTPTNTRSLSCDPINIF
LKIEPTPSVTNSTISNVRDEIESLRSQISRDMVGPKDRNSRNPDEMASYFSKRLEECQQQ
VYNAVNSVQSQVGHVRNNVDVGARGHRHPSDWESREDESYDSSDSGIGPKNLTIRPMTRA
NANALAAQGIPKEPSYRRDMMSPNDIPMSPMDDDDNYEGSQVPESNISPTPPPFRESKTI
KSDMENELPMKFHHDHDEEEEWDDFEEFIDDDTPAPEASIPVPKVGFKSHNYFYQGVYIA
YILSFLAYVYVRIQYTLDAPGLNRIYCIVVASLEIVTAPSLLLQGLCLWRWISRGPPPTN
AFERPKFHTCRIMVPTYKEPLEVVAGTVHEIIHMDLPPGLHVHVYVLDDGKRESLENWVM
SKRTKRGMYLHYVARPKLPGIPHHAKAGNINHTLHFIYDDGQTEGECVTIFDADFMPRRN
YMIQVLPVFSEKRTRPLGLVQTPQFFYNVNPDEDVWDHLNVSFFHRIEPSLDRWSAVNCC
GTNFIVRADALKDVGYFPVGCLTEDTLLSLRLCTMGWGVAYHHEVLAIGQSPHEITEIFK
QRSRWCKGNLQIFLDEFPLMQSGLSLSQRLFYSSCGFNYFCASISIPFFQLVPSWAIFFG
LWPVSKIGLEFAFAFFIYYILGNILLLFPPPRFGVKDMWNGELASTNLWFTYFNGVRRIV
GTKLLKGKGELTFKTTKKKAEGDEELSKVGFRKEDVRACYMHFIMFFIMLVTIIYAIVKV
LSTSIFSKTAIVATDVKFYFYYMYMIGMSWALINMVPYLIVVIYCWYRVRIPGLMVACFR
NIQLLLRVVCAALILVQAFTTRNLTENYLCPHDYEGKLGVSPLTMVTTMDDSSGLEVERN
AFWLLGLKDDFYTMQQVKKSACEDATIPVIVFFMHPSQGLVLEVQAGHYMPDERIGTWEE
YDEKLEYYAEHLAEIPSIIVMEPSLLMHTFNSKTEYHNTEYQLAFAQRVEKVLQKFKRSW
VYVDAGNAMYLQWTVNLEHIISVLKKMPATVRGFSVNVGSFVNSTFNRQLAEEIHCQTGL
HYIVDTSRNGGEFSTRTLEEINLCTYDPPKVEKGAIPSWQIGATKSALQGQLLAEQMDVS
ASPAAPAAGATPAESKFHKTHVVSEDTAEYDLGYIGRKKRWSLEPVNDGTAPIYESDNIA
AGGGGAGGESQPNKWLSIQSNISSRTSSMKNKGRQTNSGSFTFIHSIATNSNPPVPLLTD
YHLFTAAKTAGTKGKAAAADYDSDYTSYAGDYYYGGAGDEAAKACVAPEGEDGLDAFAWV
KTPGESDGRMYPAGTFHPCLLSHLIECSDNCPQYVPKLSGEFQRSESCMCVDE

Nucleotide sequence

Length: 4,662

>Harore.CG.MTP2014.S460.g03186.02.t
ATGCACAGCCATTCTCGCCACTCGAGAACCATGCCCGATCGTGGATACGGCGGTCGCTAC
GATTCCCAAACTTCTTCTGCTGCCCCTCGAAAAGGCAGAGGAAAAATGTCAAACCAGCCA
TCTAGCGGATCTGATTTTACGGTGAGCGACAATTCCCGCTACCGCGATTGGAATAATCAG
CATAGATCGGAAGACGGCAGCTCTTACAGTTCAGCGGAAAGCTATGGGACAGACACAGAG
GAAACTGAGAATACCCCAAGACGGAATAAATCTCGTGACCATCGCCGTAACTACGATTAC
AACGGAAGATACTATCCTGACCCCATGGAGAACGTTGAACTTCGCCGTGTGCAATCTGGT
TATTCTCAAGATACAAGCACGGCAACGGATACGACCATGACCAACGGAGATGATCGCGAG
AAGGATATTGACGAACTAGCCAATTATTTCAACAGGCGACTTGAAGACATGCAGAAACAA
ACTTCAAGTATGACTACTGATGACCCGCGCACAGGGAGAGGATATCCTCCCCGTGACCCG
TACCCGGATGACATCACCTCAACTTATAGCTATAATCGAAACAGGTTGGACGGGGATCCT
GTTTCACAAAGAGATTCCGGCAACAGGACTATAAGACCCACTAACCGCGCAATTTCGAGT
ACATCCGAGATGACACCAACCAACACACGATCGCTATCTTGTGACCCAATAAATATATTT
TTGAAGATCGAACCGACACCCAGCGTGACCAATAGCACTATATCCAACGTTCGCGATGAA
ATTGAAAGCCTTAGATCCCAGATATCGAGAGACATGGTTGGACCAAAAGATAGAAATTCA
CGTAACCCTGATGAAATGGCTTCCTACTTTAGTAAACGTTTGGAAGAGTGTCAGCAACAA
GTCTACAACGCTGTTAATTCCGTTCAGTCTCAAGTTGGTCATGTACGAAATAACGTAGAT
GTCGGCGCTAGAGGACATCGTCATCCAAGTGATTGGGAATCCCGCGAGGATGAATCATAC
GATAGCAGCGATAGCGGAATCGGCCCCAAAAATCTCACGATCAGACCGATGACACGGGCG
AACGCCAACGCACTAGCAGCACAAGGTATACCGAAAGAGCCGAGCTACCGTCGGGATATG
ATGTCTCCTAACGACATCCCGATGAGTCCAATGGACGACGACGATAATTACGAGGGAAGC
CAAGTCCCTGAATCCAACATATCACCGACACCTCCTCCGTTTCGCGAGTCCAAAACTATC
AAGTCAGACATGGAAAACGAGTTACCGATGAAATTTCACCACGACCACGACGAAGAAGAA
GAATGGGATGATTTCGAGGAATTCATCGATGATGACACGCCAGCCCCCGAAGCTTCGATT
CCAGTACCGAAAGTCGGATTCAAAAGTCACAACTACTTCTATCAAGGGGTCTACATCGCT
TATATCTTATCCTTCTTGGCATACGTTTACGTCCGAATTCAGTACACACTTGACGCTCCG
GGTTTGAACAGAATCTATTGTATCGTTGTCGCTTCGCTGGAAATCGTTACGGCTCCTTCT
TTGTTGCTTCAGGGACTGTGTCTGTGGCGATGGATTTCTCGAGGCCCTCCACCGACGAAC
GCGTTTGAACGACCGAAATTTCACACCTGTAGAATCATGGTACCGACTTACAAGGAACCC
CTCGAAGTGGTTGCTGGAACCGTGCACGAAATTATTCACATGGACCTTCCACCTGGTTTA
CACGTCCACGTATACGTTCTAGACGACGGCAAGCGTGAAAGTCTCGAAAACTGGGTTATG
TCCAAGCGTACGAAACGAGGAATGTATCTCCATTACGTTGCCAGACCAAAACTACCTGGA
ATACCTCATCACGCAAAGGCTGGTAACATCAACCATACTCTCCACTTTATCTACGATGAT
GGACAGACTGAAGGAGAATGTGTGACTATCTTTGATGCTGATTTCATGCCCAGGCGTAAT
TATATGATTCAAGTACTGCCCGTGTTCTCGGAGAAAAGAACTCGTCCGCTTGGTCTTGTC
CAAACACCCCAGTTTTTCTACAATGTCAACCCCGATGAGGACGTGTGGGATCACTTGAAC
GTTTCCTTCTTCCATCGTATCGAACCCAGTTTGGACAGATGGAGCGCAGTTAACTGCTGC
GGAACAAATTTCATCGTGAGAGCAGACGCTCTGAAAGACGTCGGTTATTTCCCTGTCGGT
TGCCTTACTGAAGACACACTGCTATCTCTTCGCCTCTGCACTATGGGTTGGGGTGTGGCT
TACCATCACGAAGTTCTCGCTATCGGTCAATCGCCTCACGAAATTACGGAGATTTTCAAG
CAACGTTCTCGTTGGTGCAAAGGAAACTTGCAGATTTTCTTGGACGAATTTCCTCTTATG
CAGTCGGGTCTTTCGTTGTCCCAGCGGCTCTTCTACAGTTCATGCGGATTCAACTATTTC
TGCGCCTCAATCTCCATTCCATTTTTCCAGCTTGTACCATCATGGGCTATCTTTTTCGGT
TTGTGGCCTGTGTCCAAAATCGGCTTGGAGTTTGCGTTTGCTTTCTTCATCTATTATATC
CTCGGTAATATTCTCCTGCTATTCCCACCTCCTCGCTTCGGCGTGAAAGACATGTGGAAC
GGTGAATTGGCTTCTACCAATCTGTGGTTCACCTATTTCAATGGAGTGCGTCGTATCGTC
GGTACCAAGCTCCTCAAAGGAAAAGGTGAACTGACTTTCAAAACCACGAAAAAGAAGGCC
GAAGGTGATGAGGAACTGTCTAAAGTAGGATTCCGTAAAGAAGATGTTCGTGCTTGCTAC
ATGCATTTCATTATGTTCTTCATTATGTTGGTCACGATCATTTATGCTATAGTTAAGGTT
CTTTCAACCTCCATTTTTTCCAAAACAGCCATTGTTGCCACCGATGTGAAGTTTTATTTC
TACTACATGTACATGATCGGTATGTCCTGGGCTTTGATCAACATGGTTCCCTATCTGATT
GTGGTGATCTACTGTTGGTATCGTGTCAGGATTCCGGGTCTGATGGTCGCTTGCTTTCGT
AACATCCAGTTGCTCTTGAGAGTTGTCTGTGCAGCTCTTATTCTTGTGCAGGCTTTCACA
ACGAGGAATCTGACAGAAAATTACCTTTGCCCACATGACTACGAAGGCAAACTAGGCGTG
AGTCCTCTGACTATGGTCACCACAATGGACGATTCATCAGGTCTCGAAGTAGAGCGTAAT
GCTTTCTGGCTGCTCGGTTTGAAGGACGATTTCTACACAATGCAACAAGTTAAGAAATCA
GCTTGCGAAGACGCTACCATTCCCGTTATTGTGTTTTTCATGCATCCCTCGCAAGGTTTG
GTGTTGGAAGTACAAGCTGGTCATTACATGCCTGACGAGAGAATTGGCACCTGGGAAGAA
TACGACGAAAAGTTGGAATACTACGCGGAACATTTGGCCGAAATTCCATCAATCATTGTC
ATGGAACCTTCGTTGCTCATGCACACATTTAATTCTAAGACTGAATATCACAACACCGAA
TATCAGCTTGCCTTCGCGCAACGTGTCGAAAAGGTATTACAGAAATTTAAGAGATCCTGG
GTTTATGTCGACGCTGGAAACGCTATGTATCTCCAATGGACGGTTAACTTGGAACACATA
ATATCAGTTTTGAAAAAGATGCCTGCCACAGTCCGTGGTTTCTCCGTAAACGTCGGTTCG
TTTGTGAACAGTACATTCAATCGTCAGCTTGCTGAAGAAATTCATTGTCAAACCGGACTT
CATTACATTGTTGATACTTCTCGTAACGGAGGAGAATTTTCTACAAGAACGCTTGAAGAA
ATTAATTTATGCACGTATGATCCACCAAAAGTAGAAAAGGGTGCGATACCCAGTTGGCAA
ATTGGAGCAACCAAATCAGCACTGCAGGGGCAACTCCTCGCTGAGCAAATGGACGTTTCT
GCTTCTCCTGCCGCTCCTGCAGCTGGCGCAACTCCGGCAGAAAGTAAGTTTCACAAAACC
CATGTTGTCTCTGAAGACACAGCCGAATACGACCTGGGATATATTGGTAGAAAGAAGCGA
TGGTCCCTCGAACCAGTAAACGACGGCACTGCTCCTATTTACGAATCCGACAACATAGCA
GCTGGAGGTGGCGGAGCAGGAGGAGAAAGTCAGCCAAATAAGTGGCTATCAATACAATCA
AATATAAGCTCCAGAACATCATCTATGAAGAATAAAGGTCGACAAACAAACAGTGGATCC
TTTACATTCATTCACAGCATAGCAACAAATTCTAATCCCCCAGTTCCTTTGCTAACGGAC
TATCATTTATTCACAGCTGCAAAAACAGCAGGAACCAAAGGTAAAGCCGCCGCGGCAGAC
TACGATAGCGATTACACATCCTACGCAGGAGATTACTACTACGGAGGCGCAGGTGATGAA
GCCGCAAAAGCATGCGTCGCCCCTGAAGGCGAGGACGGATTGGATGCGTTTGCTTGGGTC
AAAACGCCAGGAGAATCTGATGGCAGGATGTACCCTGCCGGTACATTCCATCCCTGTCTC
TTGAGTCATCTTATCGAATGTTCCGACAATTGTCCTCAGTATGTACCAAAACTTAGCGGA
GAATTTCAACGATCAGAATCTTGCATGTGTGTCGACGAGTAA

InterProScan

Gene3D
Nucleotide-diphossugar_trans (IPR029044) - T[539-772] 1.2E-55
SUPERFAMILY
Nucleotide-diphossugar_trans (IPR029044) - T[552-844] 1.13E-33
SUPERFAMILY
Beta_cellobiohydrolase_sf (IPR036434) - T[1036-1303] 8.11E-44 - T[1488-1529] 8.63E-9
Gene3D
Beta_cellobiohydrolase_sf (IPR036434) - T[1074-1307] 3.0E-19 - T[1478-1533] 4.6E-5
Pfam
Beta_cellobiohydrolase (IPR016288) - T[1094-1273] 2.2E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value