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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S449.g09059.01.t

Possible name(s)

ZNF318

Location

S449 [30,890 / 38,096]

Sequences

Amino acid sequence

Length: 1,130

>Harore.CG.MTP2014.S449.g09059.01.p
MSAARTRDICEKFALAKAPSEKSLIPEDLFIRKCFFNEMNPSESVNYKDPHRSRNDRSDE
FFHQSPLSPHDNSFGQRHHVSLPSYHAREDQFQSKESSVWPRNDRDDYGKRNSRDYSPKY
GRRSPNRYSEREHKSPYRRRQSPSPRKPSHYSAEGHRHRDQQYDRRAGYRKHSSSRSRSG
SYSKRHYRRSRSLQRQSRLRDRSSSYDSRKRYHKSSSSSTSGPSVRRSRSSSQDRKPKDD
FFKSIYPQDESREENRVNIHQSFNTEKQLPMPAHDQYQNDNDNNFSNSALVKPLNQGYVK
SSAKKGFGVTDELDDDDRFLYGDDVSTTNMNKNQDPVIQKLPVEVVPPKSQTTASKVTPG
GFDSNALKNVLKAIGFDFEMSAHKISAPQPVPAAVPAIQPSINAPPQPVQYYQPYNPYTS
AEYISQQPFAHIHAVNSGFPMSIQNPANPPGNFLIYHSLNTQSSSQQPPVQQIYTPQEPR
SNLTIIQPQVPVNAFKEAGVTPRVVLPSKENASTPSIAKDGRDRQARKERLKYLENELDK
LKKQQNELMRKKRREKDGHKDPLIKKNTLLQAGVEEQIREIRKAGIEDESDDGKEAHEIS
SDSNTVYFDPGNHWCKLCNIVLTDLKDFLAHLHSKMHRKAVDPYDRPWMELEEKSIPKSE
ENSSSQSLKGSQFLIPITGYFCVLCKTFAGDPMCAEDHCRSHKHNASYKDYSQSNENYED
QFKKLKSCSTSFNGKQEIQEQVQDEDQDKKVTKKKTKKHKHKKELIIEERKKVKIEKRKI
EHQHKSYIEEETVKQLPKRYRDSPELKLTPNPDSRDRRRNCWSPGYDEYESRKKEHSHGK
YSSDEEVTSRSREGRFGTYKRSKRDQHHRTHEKRSDDRRSQSREQENKWVEKKIDFQGNE
EKLPKELGKTSSKLPTPGFGKFSWAASSTGESNSVFDQVPVDNEVKREKATDNSAGKEKF
AIKMTGKSQTFPPRSTSSKKKEEKVFQKKKADLLKRVESLKRENALRAQLSAITLPAGRF
PRPQVKPNTTAILLGSRNIQKPGVSILKAKSPTTRNNKEQPAKPVLNHPLLGNSNDEEVI
ITKEIEVDVSPSNEEKKEPPPPGEGEDMIGEDGAASDASGISMEIASDEE

Nucleotide sequence

Length: 3,851

>Harore.CG.MTP2014.S449.g09059.01.t
AGTGTGCAGTATTTTGTTTAATTATTGACCAGGCGTAAGCGTAAAATGCAGTCGATATAG
TGTTGTACATCCGTTTATGTCGGCAATAGCACAGTTACTATCCATTTCCTACAATTATTT
ATCCGCCTACAACGTAGTGAAAGCAATATTGGCATATTGGCAAGTTCCTGGCGCTTCATA
CTTTTTCAAATTTTAACTGGCGGGGAGGGAGTGATGAGTGCCGCTCGAACGCGCGACATA
TGTGAAAAATTCGCCCTCGCCAAAGCTCCGTCGGAAAAATCGCTGATTCCTGAAGATCTT
TTTATTCGAAAGTGTTTTTTCAACGAAATGAATCCATCGGAATCTGTAAATTATAAAGAT
CCACACCGAAGCCGGAATGATAGAAGTGATGAATTCTTTCATCAAAGTCCGTTATCTCCT
CATGATAATAGTTTTGGTCAAAGGCATCATGTAAGCTTACCTTCATATCACGCTAGAGAA
GACCAATTTCAATCGAAGGAGAGCAGTGTCTGGCCTCGTAATGATAGGGATGATTATGGA
AAAAGAAATTCCAGAGATTATTCTCCGAAGTATGGAAGGAGATCACCTAACAGATATTCA
GAGAGGGAGCACAAATCTCCATACCGGAGGCGACAATCCCCCTCACCAAGAAAACCCTCG
CATTACTCTGCAGAGGGCCATCGGCATAGGGATCAGCAGTATGACAGGAGAGCAGGATAT
AGAAAACACTCCAGTAGTCGATCGAGATCGGGAAGTTATTCCAAAAGACATTATCGGCGT
AGTCGTTCTCTACAAAGACAATCTAGGCTTCGAGATAGATCTTCAAGCTATGATTCTCGT
AAACGCTATCATAAGTCATCATCCAGCTCCACTTCAGGTCCCTCAGTCAGGAGAAGCCGA
AGCTCTTCACAAGATAGGAAACCAAAAGATGACTTTTTCAAATCTATCTATCCTCAGGAT
GAGAGTAGAGAGGAAAACAGAGTAAATATCCACCAATCTTTCAATACAGAGAAACAGTTG
CCTATGCCCGCTCATGATCAGTATCAAAATGATAATGATAATAATTTCTCCAATTCTGCT
CTTGTAAAACCACTGAACCAAGGATATGTCAAATCTTCGGCAAAGAAGGGATTTGGAGTT
ACTGACGAACTGGATGATGACGATAGGTTTTTGTATGGTGATGATGTATCCACCACCAAT
ATGAATAAAAACCAAGACCCAGTAATTCAAAAACTCCCAGTTGAAGTTGTACCCCCAAAA
TCTCAGACAACTGCTTCTAAAGTAACTCCTGGAGGTTTTGACTCGAATGCTTTGAAAAAT
GTACTGAAAGCGATAGGATTTGACTTTGAAATGTCAGCACACAAAATCTCTGCACCACAG
CCAGTGCCAGCAGCTGTTCCAGCCATTCAACCTTCTATCAACGCCCCACCACAACCTGTT
CAGTACTACCAACCGTATAATCCATATACATCGGCAGAATACATCTCACAGCAACCCTTC
GCCCACATTCATGCTGTCAACAGCGGATTCCCAATGAGCATACAGAATCCCGCAAATCCA
CCAGGGAATTTTCTTATTTACCACTCACTGAACACCCAATCAAGTTCGCAGCAACCTCCT
GTGCAGCAAATTTACACTCCACAAGAACCGCGTAGCAATCTTACCATTATTCAACCCCAA
GTTCCAGTTAATGCATTTAAAGAAGCCGGGGTTACACCTAGAGTTGTGCTGCCATCAAAG
GAAAATGCTAGTACGCCAAGTATTGCCAAGGACGGGAGGGATAGGCAGGCAAGGAAGGAA
CGACTAAAATATCTCGAAAATGAATTAGATAAATTAAAGAAGCAACAGAATGAACTGATG
AGAAAAAAGCGTAGGGAAAAAGATGGACACAAGGATCCACTTATAAAGAAAAATACTCTT
TTGCAAGCTGGCGTTGAGGAGCAGATTCGTGAAATACGCAAGGCTGGAATAGAAGATGAA
AGTGATGATGGAAAAGAAGCGCATGAGATCAGTAGCGACAGCAATACTGTTTATTTTGAT
CCTGGAAACCACTGGTGCAAACTTTGCAACATCGTGCTAACTGACCTCAAAGACTTCCTG
GCTCATTTACATAGTAAGATGCATAGAAAGGCTGTTGATCCTTACGATCGACCATGGATG
GAATTGGAAGAGAAAAGCATACCTAAATCAGAAGAAAACAGTTCATCTCAATCACTCAAA
GGTTCACAATTTCTTATTCCCATAACTGGCTACTTTTGCGTGCTGTGTAAGACATTTGCT
GGGGATCCTATGTGTGCTGAAGACCATTGCAGAAGCCATAAACACAATGCTTCATATAAG
GATTATAGCCAGAGTAATGAAAATTATGAGGATCAGTTCAAAAAACTTAAATCCTGCTCG
ACCTCATTCAATGGAAAGCAAGAAATACAAGAACAGGTACAAGATGAAGATCAAGACAAG
AAAGTCACAAAAAAGAAGACCAAGAAACACAAACATAAGAAAGAGTTGATAATAGAAGAA
CGGAAAAAAGTAAAAATTGAAAAGCGGAAGATAGAGCATCAGCATAAAAGTTACATAGAA
GAGGAGACTGTGAAGCAGCTGCCAAAAAGATACCGAGACAGTCCTGAATTGAAATTGACA
CCCAACCCTGATTCCAGAGATCGTAGAAGAAATTGTTGGTCTCCTGGATATGATGAATAT
GAAAGCAGGAAGAAAGAACATTCACATGGCAAATATAGTTCTGACGAAGAGGTGACGTCA
AGAAGTCGAGAGGGTCGATTTGGCACATATAAAAGGAGCAAAAGAGACCAGCATCATCGA
ACTCACGAAAAGAGATCTGATGACAGAAGATCTCAGAGTAGAGAACAGGAGAACAAATGG
GTGGAAAAAAAGATTGATTTCCAGGGAAATGAAGAGAAGCTTCCTAAAGAACTTGGGAAA
ACTTCTAGTAAATTGCCTACTCCAGGATTTGGCAAATTTAGCTGGGCTGCTAGTTCAACG
GGGGAATCAAACAGCGTGTTTGACCAAGTGCCTGTCGACAATGAGGTTAAAAGAGAGAAA
GCGACTGATAACAGCGCAGGGAAAGAGAAATTCGCGATAAAAATGACAGGAAAATCGCAG
ACTTTTCCTCCTCGTTCGACCTCTAGTAAAAAAAAAGAAGAGAAAGTTTTCCAGAAGAAA
AAGGCAGATCTTCTTAAAAGGGTAGAGTCATTGAAGCGGGAGAATGCCCTTCGAGCACAG
TTGTCGGCTATAACTCTGCCAGCTGGGCGTTTTCCTCGACCTCAAGTCAAGCCTAACACT
ACTGCCATTCTACTGGGTTCTAGGAATATACAAAAGCCCGGAGTTTCAATTCTCAAAGCA
AAATCACCAACAACTAGGAACAATAAAGAACAACCAGCAAAACCTGTTCTGAACCATCCA
CTTCTGGGCAATAGCAATGATGAAGAAGTAATAATAACAAAAGAGATTGAAGTGGATGTT
TCTCCATCTAACGAGGAAAAGAAGGAACCTCCTCCTCCTGGGGAAGGAGAAGATATGATC
GGAGAAGATGGTGCAGCATCTGATGCCAGTGGAATAAGCATGGAAATCGCAAGTGATGAA
GAATAAACAAGACCCTTTATTTTGTAAATTACATAGATAGCAATGCTTTTTTCGACTGTA
TATGTATTGTGTTTCTTGGAAAAATCATTATAAATTTAGAGGCAGACAAACTACTGCCTT
GCTTGCACCCTTCATTTCGCATGTCCATGGGAGTAAAACCTTTCGTTGTTATTCTGCGTT
TTGTATATATATTAGTAGAATAACATGCGTGTATGCTGAGTTTTCAAGCCTAATACGATT
TTGACAGGGAG

InterProScan

SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[604-642] 1.16E-6
SMART
Matrin/U1-like-C_Znf_C2H2 (IPR003604) - T[610-644] 2.7E-6 - T[677-711] 5.1E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ZN318_HUMAN 41.667 % 125 6.51E-29