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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C7.43.v1.A...' > 
  2. Transcript 'Cisavi.CG.ENS81.R130...' > 
  3. Transcript 'KH2012:KH.S606.2.v2....' > 
  4. Transcript 'KH2012:KH.L153.32.v1...' > 
  5. Transcript 'Harore.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S445.g12734.02.t

Possible name(s)

NR2F1; NR2F2; NR6A1

Gene model

Harore.CG.MTP2014.S445.g12734

Location

S445 [44,310 / 47,846]

Sequences

Amino acid sequence

Length: 341

>Harore.CG.MTP2014.S445.g12734.02.p
MSKSYCIIDLNVDYSWHKNSGQSISDEEIDRIMSGKEFEEENLSPSISQIPLGMNFSNSM
PATTMMDSRFSVRDQDFTSYPSQVHGYNPYLATQNHLRLNHSPESASELSSGTLVEQLLQ
VEDISDLISVTTSKLINSSRINKDDMFSCLCGIADEMLYRQIVWVKKLPFFESISIKDHT
TLLSTTWAEIILLAALCIHEHQLFGILTDITSKYLPDPEELSRFSDYEMEILERMTYLYH
KFSQLKVDKEEYVIMKVINFLNQGMLVLYECSFDWMTQLWSIFNIHYKNLDMAHPSYFDL
NVVKPGYIVQGCNITLIFINIDNKIINILILELIIINSSGQ

Nucleotide sequence

Length: 1,026

>Harore.CG.MTP2014.S445.g12734.02.t
ATGTCAAAATCTTATTGCATCATTGACCTAAACGTCGACTATTCTTGGCACAAAAACTCG
GGTCAAAGTATATCGGACGAGGAGATAGATAGGATCATGTCTGGCAAAGAGTTCGAAGAA
GAAAACCTATCACCCTCCATATCACAAATACCTCTGGGAATGAATTTTTCTAATTCCATG
CCGGCTACTACAATGATGGATTCACGCTTTTCTGTTCGGGATCAAGACTTCACATCCTAT
CCCAGTCAAGTACACGGCTACAATCCATACCTTGCTACCCAGAACCATTTGCGACTGAAT
CATTCACCAGAATCGGCTTCAGAATTAAGCAGTGGCACTTTGGTGGAACAGCTTCTGCAA
GTCGAAGACATATCTGACTTGATATCTGTCACAACCAGTAAACTCATTAACAGCTCGCGC
ATCAACAAGGATGACATGTTCAGTTGCCTATGTGGCATCGCCGATGAAATGCTCTACAGG
CAGATTGTGTGGGTTAAAAAATTGCCTTTCTTTGAATCCATCTCTATAAAAGATCACACG
ACATTGCTGAGCACCACCTGGGCTGAAATTATTTTGCTTGCAGCCCTATGCATACACGAA
CACCAACTTTTTGGCATCCTGACCGACATCACTAGCAAATACTTGCCAGATCCTGAAGAA
CTATCTCGGTTTTCTGATTATGAAATGGAGATTTTGGAGCGAATGACCTACCTCTATCAC
AAGTTTTCACAGCTCAAAGTAGACAAGGAAGAATATGTGATCATGAAAGTCATCAATTTT
CTCAATCAAGGAATGTTAGTTTTATATGAGTGCTCATTTGACTGGATGACACAGTTGTGG
TCTATATTCAATATACATTACAAAAATTTGGATATGGCTCATCCAAGTTATTTTGATCTG
AATGTAGTGAAACCTGGTTATATTGTGCAAGGTTGTAATATAACATTAATATTCATTAAT
ATTGATAATAAAATCATAAATATTTTGATACTGGAATTAATAATAATAAATAGTAGTGGT
CAATAG

InterProScan

SUPERFAMILY
NHR_like_dom_sf (IPR035500) - T[92-264] 1.31E-24
Pfam
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[147-262] 2.9E-8
PRINTS
Nuclear_hrmn_rcpt (IPR001723) - T[153-174] 5.9E-9 - T[174-190] 5.9E-9 - T[245-260] 5.9E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NR6A1_HUMAN 47.287 % 194 5.21E-58