- Clone 'ma179m22' >
- Transcript 'Phfumi.CG.MTP2014.S5...' >
- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S43.g08852.01.t
Possible name(s)
HMCN1; MYLK; TTN
Gene model
Location
S43 [351,347 / 368,293]
Amino acid sequence
Length: 1,723
>Harore.CG.MTP2014.S43.g08852.01.p
MSDFTLGTSWPLEPLFWTCVTNEVRSLLNSALNSFMLTNIKCDVFGFSKDGELITASSRV
RIMEVYGTHSLVLSRTDHGDTGTYTINASNHVGSESCSAQLRVKESSYSSRGSTPKGLRS
GHGSSEVVTPTYSSSSSPATSAMSSPSMSPKLGRAINSRPVTGSVTSPWSTDLKSRSGGV
GGGASQRRRAPGFILRPRPQTVAPGEKLVLKCTLLGHPKPNVTWDRDGCKLDESDDRIHL
RDDGSDYFLELADCSSSDSGKYTVSAKNSLGKQSATVDIIVSGTGGSTAGKNRTTSSISV
SRTNHHDISDSLNNNNKSPIPRNIKSQRIEVTINSKNVNTATNENRESERKHPRDFILPP
HSNKEDVKPSSTSSYSSYTSSVSRMSTSSSRSASSSNDESPSHRSKRSKQVAPTFTRRLS
STQVLEGEELELNCEITGSPTPEMTWTRNGLPISQRDSSSNIEFKDGVARLKVSHIQSSQ
AGEYVCLAKNELGNTKCSSRVTVKPKPKQVKPKFTRLPKDIRISEGETLSLEAEVSGQPT
AEVLWSLDGQEISNGECTYRNNIAKLILHDVTLACSGQYMCTAINDAGEDYAACRVRIKQ
KKLDIPPEFTAPLSDVKTKQGDDVCLRCMVTGIPEPRVQWLFNDEVLDGGEGIEITYHDG
VAALTLDMATAEDTGCYSCIAVNTEGKSTTSCQVVVSELSRQAPVVKIAPEFVTRFEDYI
RAMEGDCVTLTCKVKGTPDPEITWKINDKVVRDAKISFENGQASFVLDPISSDHAGNVVC
LAKNSSGQTKHEGRLYVRAKREAPCFVTQLAESVEVQEGKEVTFGGQIKGHPQPRVSWTR
NGRSLSVLNTETSYEEGKASVRIRKAGTSDAGRYVCTARNLSGETESSCMVTVVQREATQ
KPEFKKKLADMNLNEGQDIRLVCEVTGLPIPAISWVLDGQKLEEEDGEAAFKNGVATMLM
EDAMTEDSGVYECVAKNSEGEARTRCNVKVTSAKKAAKPAEEGPSFPIQLEDMTINENED
IVVSCQVKGNPKPTPIPDAECKYSDDGNAQLFLPEALPEDEGVYTCIAQNHLNRVMCSCK
VTVKAIPKTKRKQTSSKEAEPSHVESKTKVETSRPSWSPKKSAREMSEVESPKTTPTSSR
VNINGKAEKNRKYGRPISSEDEEQPVQKREGPDRPPKFIEELQDITVPDGSINYKLVARV
SGMPPPSVKWYVDDSEIEESDEFRYETDGDKRILIFAEIFPEDSGTYTCVALNSVGEVKS
KMKISVEEIDGDPPIFILKPRPLTVNAGDSAVFTCKVDGEPVPTLQWLYCNQPIAETERI
TITPADAQNNYIHSLEVQEVRIEDAGRYAACCKNLLGDITCTVSMIVNAPKNQEEKKDFR
NVLKHSASTKSKQGETPQAEQVDFRGVLKRQVETNATPESNQAKSEDAPDFREALSRPVR
TKVLTEEERKLQRAEQKDFRANLVRKVDTKTVTNEVLKVKSPSQKDFRDEALKTKVKTKE
YAEDVIKQKHAEQKDFRSEALKTKVTTKAYKEENMKAMRAEQVDFREVLSPTNKRQLSKE
EMSSSEAPKFELSGTPAKMKLNKEKMEHNTVATRRTRARGGVVESTRRTKSSEEEVPKGK
APVFSKEIKDKKVNDATPFELVCHVVGNPQPKVSWFLGDEEIQSEADISITREGGVCKLA
VAESFPDDEGTYLCRAENEYGVAQCSAHVTVVTDGELECEHDN
Nucleotide sequence
Length: 6,563
>Harore.CG.MTP2014.S43.g08852.01.t
ATGTCGGATTTTACGTTGGGTACATCTTGGCCACTGGAACCTCTTTTTTGGACTTGTGTT
ACAAACGAGGTAAGGTCACTCCTGAATTCTGCTCTAAATTCTTTCATGCTGACTAATATT
AAATGCGATGTTTTTGGATTTTCTAAGGATGGAGAATTGATTACTGCCTCGAGTCGTGTT
CGTATTATGGAAGTATATGGAACTCATAGCCTTGTACTATCTCGTACGGATCACGGAGAC
ACTGGGACTTACACAATAAACGCATCAAACCACGTCGGAAGCGAATCTTGTTCAGCGCAA
CTGCGAGTCAAAGAATCTTCCTATTCGAGTCGTGGAAGCACACCTAAAGGCCTGAGGTCA
GGACACGGCAGTTCAGAGGTCGTTACCCCAACGTATTCAAGTTCAAGTAGTCCAGCAACT
TCAGCAATGAGTTCACCCTCGATGTCCCCAAAGCTGGGTCGCGCGATAAATTCGCGGCCA
GTTACAGGATCAGTGACGTCGCCATGGAGCACCGATTTGAAATCTAGGTCGGGCGGTGTC
GGAGGAGGAGCGTCACAGCGTCGTCGAGCTCCGGGATTTATATTGCGACCCAGACCACAA
ACGGTAGCTCCTGGAGAAAAACTAGTGTTGAAGTGTACATTACTCGGTCATCCAAAACCA
AACGTTACATGGGACAGAGACGGTTGCAAGTTGGACGAATCAGACGATCGTATTCATTTG
CGCGATGATGGAAGCGACTATTTCCTAGAACTGGCTGATTGCTCATCAAGTGATTCGGGA
AAGTACACAGTGTCGGCTAAGAATTCGCTAGGAAAGCAGTCGGCCACTGTCGATATCATT
GTTTCAGGGACTGGTGGAAGCACTGCAGGTAAAAATCGAACAACATCTTCCATTTCGGTG
AGTCGAACCAATCATCACGACATAAGCGACAGTTTGAACAACAACAATAAATCTCCGATC
CCACGAAATATCAAATCACAACGAATCGAGGTCACGATCAATAGTAAGAATGTGAATACC
GCTACTAATGAAAATAGAGAAAGCGAACGCAAGCATCCTAGGGATTTCATACTCCCTCCT
CACTCTAATAAAGAGGATGTCAAACCGTCCTCTACGTCTTCCTACTCCTCTTATACATCT
TCCGTATCACGAATGTCTACATCATCTTCGCGATCTGCCTCTTCATCCAACGACGAATCG
CCTTCACACCGTTCGAAGAGGAGCAAACAAGTCGCTCCTACTTTCACGAGACGGCTCTCA
AGCACGCAAGTTCTAGAAGGCGAAGAATTGGAACTTAATTGTGAAATCACCGGCTCCCCA
ACACCTGAAATGACATGGACTCGAAACGGCCTTCCCATTTCACAGCGCGACTCATCGAGC
AATATCGAATTCAAGGACGGGGTCGCTCGCCTCAAGGTGTCGCACATCCAATCATCTCAA
GCGGGGGAATACGTTTGCCTGGCGAAAAACGAACTTGGAAATACGAAATGTAGCAGTAGA
GTAACGGTTAAACCTAAACCAAAACAAGTGAAACCAAAATTTACCCGACTTCCGAAGGAT
ATTCGAATCAGCGAAGGAGAGACTTTGAGCTTGGAAGCGGAAGTTTCCGGTCAACCGACA
GCGGAAGTACTATGGTCATTAGACGGACAAGAAATTTCGAATGGAGAATGTACATACCGT
AACAACATAGCCAAGTTAATACTGCACGACGTAACGCTAGCTTGCAGTGGACAATACATG
TGTACGGCGATTAACGATGCAGGGGAAGACTATGCCGCTTGCAGAGTTAGGATTAAACAA
AAGAAACTCGATATTCCACCTGAGTTCACGGCTCCGCTGTCTGACGTAAAAACTAAACAG
GGCGACGATGTTTGCCTACGATGTATGGTGACGGGTATTCCTGAACCACGTGTACAATGG
CTTTTCAACGACGAGGTTTTGGATGGTGGCGAAGGAATTGAGATCACTTACCATGATGGC
GTGGCTGCCCTTACACTTGATATGGCAACTGCAGAAGACACGGGATGCTATAGCTGTATT
GCTGTTAATACCGAAGGAAAGTCGACTACTAGCTGTCAAGTTGTGGTATCAGAATTATCG
AGACAAGCGCCGGTGGTCAAAATTGCTCCCGAATTCGTTACCCGATTCGAAGATTACATT
AGGGCAATGGAAGGCGATTGCGTTACCTTGACATGCAAAGTTAAAGGAACGCCGGATCCC
GAAATAACTTGGAAAATAAATGACAAAGTCGTAAGAGATGCAAAAATATCATTTGAGAAT
GGCCAAGCATCCTTTGTCCTGGACCCAATTTCATCTGACCACGCTGGAAACGTCGTTTGC
CTGGCTAAAAATTCCTCAGGGCAAACTAAACATGAAGGTCGTTTGTATGTCAGAGCCAAG
AGGGAAGCCCCGTGTTTCGTGACTCAGTTGGCTGAAAGTGTAGAAGTTCAGGAAGGCAAA
GAAGTGACATTCGGAGGTCAGATCAAAGGTCATCCGCAACCTAGAGTCTCTTGGACCCGA
AATGGTAGATCGCTCAGCGTTCTCAATACCGAAACGTCTTATGAAGAAGGCAAAGCAAGC
GTAAGGATTCGTAAAGCCGGTACCAGCGACGCTGGCAGGTATGTTTGCACAGCAAGAAAC
TTGTCTGGAGAAACAGAATCCTCTTGCATGGTCACTGTTGTCCAAAGAGAAGCAACTCAA
AAACCAGAGTTCAAAAAGAAGTTAGCTGATATGAATTTGAACGAAGGGCAAGATATAAGA
CTTGTGTGTGAAGTTACTGGTCTTCCCATACCGGCTATTTCCTGGGTCTTGGATGGACAA
AAACTGGAGGAGGAAGATGGAGAGGCTGCTTTCAAGAATGGTGTCGCAACAATGTTGATG
GAAGATGCTATGACGGAGGACTCAGGAGTATATGAATGCGTTGCTAAAAATTCGGAGGGT
GAAGCGAGAACTCGATGTAATGTTAAGGTCACATCAGCTAAGAAAGCAGCCAAGCCTGCT
GAAGAAGGACCATCTTTTCCTATCCAACTGGAGGATATGACGATTAATGAAAACGAAGAT
ATTGTAGTGTCATGTCAAGTGAAAGGCAACCCAAAACCTACGCCCATCCCAGATGCAGAA
TGCAAATATTCGGACGACGGGAACGCCCAGTTATTTTTGCCAGAAGCACTTCCAGAAGAT
GAGGGAGTTTACACGTGCATTGCTCAGAATCATCTTAATAGAGTTATGTGCTCATGTAAA
GTTACTGTCAAAGCAATACCTAAGACAAAACGCAAGCAAACATCCAGCAAGGAAGCCGAG
CCATCCCACGTGGAATCCAAAACTAAAGTAGAAACGTCAAGGCCTTCTTGGTCTCCAAAG
AAAAGTGCGCGAGAGATGAGCGAAGTTGAAAGTCCAAAGACAACTCCGACTAGCAGCCGT
GTGAATATTAATGGAAAGGCCGAGAAAAACAGAAAATACGGGAGGCCGATCTCGTCGGAG
GATGAAGAACAACCAGTACAAAAGAGGGAGGGTCCTGATCGCCCACCTAAGTTTATAGAG
GAACTACAAGACATAACCGTACCGGACGGTTCTATTAACTATAAACTGGTCGCTCGAGTT
TCAGGTATGCCACCGCCCAGCGTCAAGTGGTATGTCGACGACTCGGAAATCGAGGAGTCT
GACGAATTTCGTTACGAAACCGATGGCGACAAACGAATTCTAATTTTTGCTGAAATATTT
CCTGAGGATAGCGGCACATATACTTGCGTAGCATTGAATTCAGTTGGAGAAGTGAAGTCA
AAAATGAAAATTTCAGTGGAAGAAATTGATGGCGACCCTCCGATTTTTATCCTCAAACCG
CGCCCTCTAACGGTAAACGCTGGAGATAGTGCGGTGTTTACTTGTAAAGTTGACGGAGAG
CCGGTACCTACGCTGCAATGGCTTTACTGTAATCAGCCAATTGCTGAAACCGAACGCATT
ACCATTACACCTGCAGACGCTCAAAATAATTACATCCATAGCTTGGAAGTTCAGGAAGTC
AGAATTGAAGACGCAGGCAGATATGCTGCTTGTTGCAAAAACCTTCTGGGCGACATAACA
TGTACCGTGTCAATGATCGTAAATGCTCCAAAGAACCAAGAGGAGAAGAAAGACTTCCGC
AACGTTTTGAAGCACTCTGCATCAACTAAATCTAAGCAGGGTGAAACACCGCAGGCTGAA
CAGGTCGACTTCAGAGGAGTGCTAAAACGTCAAGTCGAAACAAATGCCACCCCTGAATCG
AATCAAGCCAAGTCGGAGGACGCTCCAGATTTTCGTGAAGCACTTTCTCGCCCAGTGAGA
ACAAAAGTTCTTACAGAAGAGGAGCGAAAGTTACAGAGAGCGGAGCAGAAAGATTTTCGA
GCCAACCTTGTACGCAAAGTCGATACGAAAACAGTAACGAACGAAGTATTGAAAGTGAAG
AGTCCAAGTCAAAAGGACTTTAGAGATGAAGCGCTCAAGACTAAAGTGAAAACGAAAGAA
TATGCTGAAGACGTGATCAAACAAAAGCATGCAGAACAAAAAGATTTTAGGTCTGAAGCC
TTGAAGACTAAGGTTACCACTAAGGCGTACAAAGAAGAAAATATGAAGGCAATGCGCGCA
GAGCAAGTGGACTTCCGCGAAGTTTTGTCACCTACTAATAAGCGGCAATTGTCCAAGGAA
GAAATGTCATCAAGCGAAGCACCCAAGTTTGAACTTTCCGGCACACCAGCCAAGATGAAA
CTGAACAAAGAAAAAATGGAACATAACACCGTTGCAACTAGACGAACAAGGGCGAGGGGC
GGCGTTGTCGAGTCAACTCGTCGCACCAAATCGAGCGAGGAGGAAGTCCCTAAGGGCAAG
GCTCCGGTATTTAGTAAAGAAATAAAGGATAAAAAGGTAAACGACGCTACCCCATTCGAG
TTGGTTTGTCACGTGGTAGGAAATCCTCAACCGAAAGTGTCTTGGTTCCTAGGAGACGAA
GAAATTCAATCTGAAGCAGACATTTCCATCACGAGAGAAGGTGGCGTATGCAAGCTAGCT
GTTGCGGAAAGTTTCCCGGACGACGAAGGAACCTACCTATGTCGAGCAGAGAATGAGTAC
GGGGTGGCGCAGTGCTCGGCTCACGTCACTGTTGTTACTGACGGTGAGTTGGAGTGTGAA
CACGACAACTGAGTGTGTATTGAATGTCGAGCTGGCGTCCGCCCCTTCTGATTAAATGTT
GGAAAAAAAACGATGTTGGAAAAACTAAAACATCGCACAACAAGTGACCAAGAAAATAAA
TTTTGCAATACCATCATTGTATATTAATGCAGCACAACGCTACAAAAGGGCATCGGTCTC
CTCATTCCATGCACACTCAGTGTGACTAAGCTAGCAAAACAAAATCTATTATACCTAATA
TAGCAGCTCTAGATAGCTCTTGTCAACTATATAATTTTATTGCGTAAAATCAAAATAGTG
CTGAAATATCAAACTCGATTATCGTCATCTCCGTTAAAAAAAAAACTCGTTGAACATTTT
CGTAGAACCCGTAGTCTTGTCGTAGTCAACTGAGTATTGAGATGAGTAGCTCGTCCCTTT
TGTGCATTGTGCCTGTCAGTGTTATCTGATCAATGCTGGAATGGTGATTGGTGTTTTATA
ACGAATAGCTTGCTTTTATTCTGGCGTCTCTAACATACCTATTTTCGCTTGAACGTGCAG
TTTTTCTTTTATAAGTATATGTTAGGCTTGAAAAAAGCTGCAGAAAGTCCTTAGTCCTTG
CTATAATTTTATGTTTTACTCGTTGGTAATTGTAGTTCTAGAATAACTTTTTAATCCAAA
CGATCATCATTTTATTACCAATATGCAGTATGAGCAAACCCTGTAGTATTCGCAGTTAGC
TGCAGCATGCAAACCACCTTATTGTACATACTTATCCCTGATGTGGCTTATTATATCCCG
TATTGGCATGACTATTACTCGCACTATAGTATTCAAACTAACACAAAATAATATAAAAAA
GAATAAAGCGGTAGAATGTCGAACGTTTCTGGTGAACTAAATCAAGATAGGGCGACTGCT
AATGGTTGTTAGATCATCTCCACCTTTAAACTTTACTCTTGGAAAGATGTTAGCGTTGAT
TTTCTTCAACGGGGTGAAGATATCTTTTAGTTGACAAATTGTAAAGGACCGTAATTGCCC
GTAGCGTTATTTAGATAGCGACATTAGACATTGCGCTCTGTTAAATGTACGTCGGTGGTT
ACTGGATTTCAATAATGTGCCAAGAGTAAGTGTTACATTGCGGCAAAGAACTGGTTTCAA
ATGTAAAGCGAAATGATATTTCCTCTACGTCATATTTTTTCAAAGCGATTGTTTTCAATC
AGTAATTTACCATCCATCGCCCTTAGTGCTTGTTTTCATTTGAATACGGTGCTTTACTAT
GTACTCATCGTGAGTAAAAGCACGCTAGGTTGATACGTAACTCGTCATCGCATTTAAATT
AGTATAGCTTTTTTGCACATATGTCAGATTTAGAAGGTTGCTTGTGGTATCGAAACAGCG
GGAGGCGCTGTAAAATTCATGTC
| SMART |
Ig_sub (IPR003599) - T[4-104] 4.9 - T[197-282] 3.2E-9 - T[419-504] 5.1E-11 - T[518-599] 1.5E-6 - T[613-697] 2.9E-7 - T[717-798] 2.7E-7 - T[811-894] 3.9E-8 - T[908-991] 6.0E-8 - T[1010-1084] 2.0E-7 - T[1182-1267] 0.0025 - T[1280-1368] 4.2E-6 - T[1628-1712] 7.4E-4 |
| Gene3D |
Ig-like_fold (IPR013783) - T[41-114] 3.2E-10 - T[183-284] 8.7E-22 - T[400-507] 3.2E-25 - T[508-599] 8.4E-19 - T[601-705] 9.2E-23 - T[706-802] 2.4E-17 - T[803-898] 4.2E-19 - T[899-996] 5.0E-22 - T[997-1090] 1.0E-12 - T[1171-1271] 1.5E-22 - T[1272-1379] 8.6E-19 - T[1617-1713] 2.8E-22 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[43-105] 8.75E-11 - T[191-284] 6.15E-21 - T[413-508] 3.07E-22 - T[512-600] 2.63E-18 - T[607-698] 1.55E-21 - T[707-800] 2.36E-15 - T[804-894] 8.99E-17 - T[902-993] 1.02E-18 - T[1004-1088] 3.61E-14 - T[1176-1270] 1.55E-20 - T[1274-1370] 6.59E-20 - T[1622-1712] 2.12E-20 |
| Pfam |
Ig_I-set (IPR013098) - T[48-103] 4.1E-7 - T[192-281] 1.8E-17 - T[413-503] 3.4E-19 - T[512-598] 1.7E-15 - T[607-696] 3.3E-18 - T[712-795] 7.3E-13 - T[806-893] 3.4E-18 - T[902-990] 1.5E-18 - T[1004-1083] 4.1E-8 - T[1176-1266] 3.3E-18 - T[1275-1367] 4.2E-16 - T[1622-1711] 1.9E-19 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[191-282] 11.497 - T[413-502] 15.072 - T[512-597] 10.608 - T[607-697] 13.439 - T[710-796] 11.987 - T[804-892] 12.386 - T[902-991] 14.256 - T[1004-1082] 9.5 - T[1176-1265] 11.878 - T[1273-1348] 9.718 - T[1622-1710] 11.388 |
| SMART |
Ig_sub2 (IPR003598) - T[203-271] 2.8E-4 - T[425-493] 1.0E-14 - T[524-588] 4.5E-4 - T[619-686] 1.2E-8 - T[723-787] 1.3E-7 - T[817-883] 9.7E-6 - T[914-980] 2.8E-14 - T[1016-1073] 1.1E-5 - T[1187-1256] 2.4E-5 - T[1286-1357] 7.8E-6 - T[1634-1701] 1.9E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 23.459 % | 254 | 1.11E-67 |
| TITIN_HUMAN | 23.955 % | 289 | 3.17E-78 |
| MYLK_HUMAN | 31.07 % | 251 | 3.55E-67 |