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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R421...' > 
  2. Transcript 'Harore.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S43.g04188.01.t

Possible name(s)

DPCD

Gene model

Harore.CG.MTP2014.S43.g04188

Location

S43 [77,207 / 78,063]

Sequences

Amino acid sequence

Length: 196

>Harore.CG.MTP2014.S43.g04188.01.p
MANWVETLNSARKTSMIQDGRRKIHYTFSDDRELVEEYDIKSNEIVIRKWRKKTTLGEST
KFDYEIGEPEKFGASLALGVEHMAESSSNPVFFRQDTKKAFQWRIRNLLYPLNVYDVKVE
GDTIVVRTSNKKYFKKFQIPDMQRENIPLEESDLTFAHANNTLIIQYKKPKQILDNHEVI
VSELKKMKLSGDGDVD

Nucleotide sequence

Length: 780

>Harore.CG.MTP2014.S43.g04188.01.t
ATGGCCAACTGGGTTGAAACTCTCAATTCTGCGCGTAAAACGTCGATGATTCAGGATGGT
AGGCGTAAAATCCATTATACGTTCTCCGACGACAGAGAACTAGTCGAAGAATACGACATA
AAATCTAACGAAATAGTTATCAGAAAGTGGAGGAAAAAAACAACTCTCGGAGAGTCAACT
AAATTTGATTACGAAATTGGTGAACCTGAGAAATTTGGCGCGTCTTTAGCTCTAGGCGTG
GAACACATGGCAGAATCTTCTTCCAATCCTGTGTTTTTTCGTCAAGACACGAAGAAAGCA
TTTCAGTGGAGAATCCGTAATCTACTGTATCCCCTCAATGTTTACGACGTCAAAGTGGAA
GGAGATACGATAGTAGTCAGAACCTCCAATAAGAAATATTTCAAGAAGTTTCAAATTCCC
GATATGCAGAGGGAAAACATTCCACTGGAAGAATCGGATCTAACATTTGCTCATGCTAAC
AATACATTGATAATACAATACAAAAAGCCAAAGCAGATCTTAGATAACCATGAAGTTATT
GTCAGTGAATTGAAAAAAATGAAACTTTCTGGAGATGGAGATGTAGATTAATCACAAAAT
CAATTGTTGCTGAAATATTTTATGCCTGGATCTAGGAAATCTGGAAACTTGTGTGTGCGC
ATTGACGCACCATCCAATTCAACATGTCTATGGGTATGCTACAATCTCCATGAATTAATT
TCTGTTATTTTGAAAGAACATGCAAATATTGTTTGGTCTGATGGTTCCCTTTATCTCTGA

InterProScan

PANTHER
DPCD (IPR026224) - T[2-196] 4.3E-82
Pfam
DPCD (IPR026224) - T[4-189] 9.1E-78
PRINTS
DPCD (IPR026224) - T[34-51] 7.9E-29 - T[90-105] 7.9E-29 - T[105-120] 7.9E-29 - T[124-142] 7.9E-29

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DPCD_HUMAN 50.754 % 216 5.24E-72