- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S439.g09641.01.t
Possible name(s)
NEK4; STKLD1
Gene model
Location
S439 [4,947 / 6,906]
Amino acid sequence
Length: 652
>Harore.CG.MTP2014.S439.g09641.01.p
MENYRVLQRLGRGAQGSVYLVESKYDKLNYVLKKVECNDEGEANKAFKEAMALQELKHPF
ICGYREFFVTWDKEESAMFVCIVMDFYELGDLSKVIKTKRQKQEAIEEMIIKKWLGQMVE
GLVFVHNKKVIHRDLKPSNIFMTKQLNITIGDFGVATVMGDARTRTRTTVGSMNWMAPEV
MDRPYDERSDVWSLGCIILEMASCAIMDSVQISTSLFEIKQNPQCLEDALSDLSKGKYSA
DLCQLIRTMLRRNFQQRPTAVELVTLPYIQECLLLNPETKLVKKKVVTSTPTAPVPKNNG
VPAVIEYMLSNSENESAQKQSLIYLNELSQLEDAPEFNDVAKKQIVTAMNDHAAQMDIQL
HGCQILVNLLSSAQDGDILYTKQIIQPVLLAMRSHAASAELQTAACSLIMTLSADEYAAD
VIGQIGGVQDILSAMRQFTNDITICSNCCGALWSLAVNEANAMIVTKEKGLGDVCKAMEQ
HSKSADVVETACSAIWSLSLEDDNIDMLSDVAISLIVEALENHTKDTKVVKNAFMALASI
VTCGEACAFRVLVPSQDVLGIPIILEAYKRHNDNPDIVENFCTMIVELCEYDDIIPEIKS
AAFKLADIFNEIYHRYKSNEEIFSSVTSVQKKLGFKLTQPKRTSSKTNKQKK
Nucleotide sequence
Length: 1,959
>Harore.CG.MTP2014.S439.g09641.01.t
ATGGAGAATTATAGAGTACTTCAACGGCTGGGAAGAGGAGCACAGGGATCCGTGTATCTG
GTAGAGTCAAAGTATGATAAATTGAACTATGTGCTCAAGAAAGTTGAATGCAATGACGAG
GGGGAAGCTAATAAAGCATTTAAGGAAGCCATGGCCCTTCAGGAATTGAAGCATCCATTT
ATTTGTGGATACAGAGAATTTTTTGTGACATGGGACAAAGAAGAATCGGCTATGTTTGTG
TGTATTGTCATGGATTTCTACGAACTCGGTGATTTGTCGAAGGTAATCAAAACTAAGCGT
CAAAAGCAAGAGGCCATCGAAGAGATGATCATCAAGAAATGGCTGGGACAGATGGTGGAA
GGACTGGTCTTCGTCCACAACAAGAAAGTGATACACAGAGACTTGAAGCCCAGTAACATC
TTCATGACGAAGCAGTTGAACATCACCATCGGTGATTTTGGAGTGGCCACCGTGATGGGT
GACGCTAGGACTCGGACCAGGACAACAGTAGGATCCATGAACTGGATGGCTCCTGAGGTC
ATGGACCGGCCTTATGATGAACGCAGTGATGTTTGGTCACTGGGCTGTATCATTTTAGAG
ATGGCGTCGTGTGCCATAATGGATTCTGTTCAGATATCGACATCTCTATTTGAAATCAAA
CAGAATCCGCAATGTCTAGAGGATGCTTTGTCTGATCTTTCGAAAGGAAAATACTCTGCC
GATCTGTGTCAGCTGATTCGCACTATGCTGAGGAGAAATTTTCAGCAGCGACCCACCGCA
GTGGAGTTGGTGACCTTGCCATACATACAAGAATGTCTGCTGTTGAATCCTGAGACAAAG
CTCGTTAAAAAGAAGGTAGTCACCTCGACTCCCACTGCCCCGGTTCCCAAAAACAATGGA
GTTCCAGCTGTAATCGAATACATGTTGTCCAATTCAGAAAATGAGAGTGCGCAAAAGCAG
TCTTTGATATATCTGAATGAGCTATCTCAGCTGGAGGATGCTCCAGAATTTAATGATGTT
GCCAAAAAACAAATTGTCACTGCAATGAATGATCATGCTGCTCAGATGGACATTCAGTTG
CATGGATGCCAGATCCTAGTGAATTTGTTAAGCTCAGCACAGGACGGTGATATTTTATAC
ACAAAGCAAATAATTCAGCCTGTTCTTTTGGCGATGAGATCTCATGCTGCCAGTGCAGAA
TTACAAACAGCAGCATGCTCACTCATCATGACCCTATCAGCCGACGAATACGCTGCTGAT
GTGATTGGACAGATAGGAGGGGTTCAAGACATCCTGTCTGCTATGAGACAGTTTACTAAT
GATATCACTATTTGTTCTAACTGTTGTGGTGCCCTCTGGAGTCTGGCTGTCAATGAGGCC
AATGCTATGATCGTAACGAAGGAGAAAGGACTAGGCGATGTGTGCAAAGCAATGGAGCAG
CATAGCAAAAGTGCAGATGTTGTGGAGACGGCTTGTTCTGCCATCTGGTCTTTGTCCCTC
GAAGATGACAATATTGACATGTTGTCAGATGTGGCTATATCTCTAATAGTTGAGGCTCTA
GAAAACCACACAAAAGATACCAAAGTCGTAAAAAATGCGTTCATGGCTTTAGCCAGTATT
GTAACCTGTGGTGAAGCGTGTGCGTTTCGTGTGTTGGTCCCATCTCAGGACGTGCTTGGT
ATTCCGATCATATTAGAAGCGTATAAGAGGCACAATGATAATCCTGACATAGTGGAAAAT
TTTTGCACAATGATCGTGGAACTCTGTGAATATGACGATATTATTCCGGAAATAAAGTCT
GCTGCGTTCAAGCTGGCTGATATTTTCAATGAGATATATCACCGCTACAAATCGAACGAG
GAAATTTTCAGCTCTGTGACGTCTGTGCAGAAAAAATTAGGATTCAAACTGACACAACCG
AAGAGAACAAGTTCCAAGACTAACAAGCAAAAAAAGTAA
| SUPERFAMILY |
Kinase-like_dom_sf (IPR011009) - T[2-287] 2.6E-66 |
| Pfam |
Prot_kinase_dom (IPR000719) - T[4-269] 1.1E-53 |
| SMART |
Prot_kinase_dom (IPR000719) - T[4-269] 2.0E-68 |
| ProSiteProfiles |
Prot_kinase_dom (IPR000719) - T[4-269] 41.842 |
| ProSitePatterns |
Ser/Thr_kinase_AS (IPR008271) - T[130-142] . |
| Gene3D |
ARM-like (IPR011989) - T[280-611] 4.6E-26 |
| SMART |
Armadillo (IPR000225) - T[288-330] 49.0 - T[350-414] 110.0 - T[415-457] 77.0 - T[458-500] 24.0 - T[501-542] 18.0 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[300-616] 4.53E-27 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NEK4_HUMAN | 33.948 % | 159 | 6.15E-41 |
| NEK3_HUMAN | 30.462 % | 142 | 2.59E-36 |
| STKL1_HUMAN | 28.257 % | 246 | 3.89E-72 |
