- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Moocci.CG.ELv1_2.S33...' >
- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S42.g14417.02.t
Possible name(s)
TUBA1A; TUBA1B; TUBA3C
Gene model
Location
S42 [373,223 / 376,416]
Amino acid sequence
Length: 451
>Harore.CG.MTP2014.S42.g14417.02.p
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQISTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLVAQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEGEGEEEGEEY
Nucleotide sequence
Length: 1,712
>Harore.CG.MTP2014.S42.g14417.02.t
CACGCTGTTCACTATATCCATCTGTACCTGCAGAAGACACGTAACCGTCTGTGCGAGTCA
GAATTTCGATCTTTCTATAAATCATCTATCTTGTAATACTTCTTCAATATGCGTGAATGT
ATCTCTATCCACGTTGGACAAGCCGGTGTCCAGATCGGTAATGCTTGCTGGGAATTGTAC
TGTCTTGAGCATGGTATCCAGCCTGATGGCCAGATGCCAAGTGATAAGACCATTGGAGGA
GGAGACGATTCCTTCAACACCTTCTTCAGCGAAACTGGTGCAGGAAAACATGTTCCGCGT
GCGGTTTTCGTCGATCTCGAACCAACGGTAGTTGATGAGGTTCGTACCGGAACCTACCGT
CAACTCTTCCACCCCGAGCAGCTCATCACTGGTAAGGAGGATGCCGCGAACAACTACGCT
CGTGGTCATTACACCATCGGAAAGGAAATCGTTGACTTGGTCCTCGATCGTATTCGTAAG
CTTGCTGACCAATGTACCGGTCTCCAAGGTTTCCTCATCTTCCACTCGTTCGGAGGTGGC
ACCGGATCCGGATTCACATCCCTTCTCATGGAACGTCTCTCGGTCGACTATGGCAAAAAA
TCAAAACTTGAATTTGCCATCTACCCTGCTCCTCAGATATCCACCGCTGTCGTCGAACCA
TACAACTCTATCTTGACTACTCACACCACCCTTGAGCACTCTGACTGCGCATTCATGGTT
GACAACGAAGCCATCTACGACATCTGTCGTCGTAACCTCGATATCGAACGACCAACCTAC
ACCAACTTGAACCGACTTGTTGCTCAAATTGTGTCGTCCATCACTGCATCCTTGAGATTC
GATGGTGCCCTCAATGTTGATTTGACTGAATTCCAAACCAACTTGGTGCCATACCCCCGA
ATCCACTTCCCCCTCGCTACCTATGCTCCGGTCATCTCTGCTGAGAAAGCATACCACGAA
CAACTCTCTGTTGCTGAAATTACCAACGCCTGCTTCGAACCGGCCAACCAGATGGTAAAA
TGCGATCCACGTCATGGCAAGTACATGGCGTGCTGCATGTTGTACCGTGGTGATGTTGTC
CCCAAGGACGTCAACGCTGCCATTGCGACCATCAAGACCAAGAGAACCATCCAATTTGTC
GACTGGTGTCCAACTGGTTTCAAGGTTGGTATCAACTACCAGCCACCCACCGTTGTGCCA
GGTGGCGATCTTGCTAAGGTCCAGCGTGCCGTCTGCATGTTGAGCAATACCACTGCTATT
GCAGAGGCATGGGCTCGTCTTGACCATAAATTTGACTTGATGTACGCCAAGCGTGCTTTC
GTCCATTGGTACGTCGGTGAGGGTATGGAGGAAGGTGAATTTTCCGAGGCCCGTGAGGAC
TTGGCTGCCCTCGAGAAAGATTACGAAGAGGTCGGTGTCGATTCCGTAGAGGGTGAAGGC
GAGGAAGAAGGAGAGGAGTATTAGATGATCAACATATCACCTCATCCACCGTTACCAACC
TACTCTGACCCACATTTACGATTAATCAGCATTAAGCAAATCGAATAATTTTAACCAATT
TTAACATCGAAACGAATAATTTTAACCAATTTTCAAACGAAACCTGTTTTTAATGCAATT
ATTTTTTGTACTGTTCTACTATGATATATCCACCCTGGTGACTTTGCATGACAATACTAC
AGCAAAACAGAAAGTGAAAAAGAAAAATGCAA
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-268] 5.0E-133 |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-244] 9.03E-102 |
| PANTHER |
Tubulin (IPR000217) - T[2-447] 0.0 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[3-213] 2.7E-68 |
| PRINTS |
Tubulin (IPR000217) - T[10-30] 1.1E-90 - T[53-72] 1.1E-90 - T[95-106] 1.1E-90 - T[108-132] 1.1E-90 - T[134-152] 1.1E-90 - T[153-174] 1.1E-90 - T[178-191] 1.1E-90 - T[192-212] 1.1E-90 - T[380-408] 1.1E-90 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[18-33] 4.7E-121 - T[45-58] 4.7E-121 - T[88-101] 4.7E-121 - T[120-128] 4.7E-121 - T[148-160] 4.7E-121 - T[161-172] 4.7E-121 - T[214-226] 4.7E-121 - T[274-289] 4.7E-121 - T[321-342] 4.7E-121 - T[347-360] 4.7E-121 - T[360-379] 4.7E-121 - T[385-401] 4.7E-121 - T[422-438] 4.7E-121 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[49-246] 1.3E-83 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[142-148] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[246-437] 4.88E-87 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[248-393] 1.8E-60 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[263-391] 2.9E-51 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[269-383] 7.6E-68 |
| Gene3D |
Tubulin_C (IPR023123) - T[384-450] 1.4E-35 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA1A_HUMAN | 98.004 % | 936 | 0 |
| TBA1B_HUMAN | 97.783 % | 936 | 0 |
| TBA3C_HUMAN | 98.226 % | 926 | 0 |