- Transcript 'Moocci.CG.ELv1_2.S62...' >
- Transcript 'Phfumi.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C2.65.v1.A...' >
- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S422.g05364.01.t
Possible name(s)
ACTA2; ACTB; ACTG1
Gene model
Location
S422 [19,822 / 21,648]
Amino acid sequence
Length: 400
>Harore.CG.MTP2014.S422.g05364.01.p
MDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFESEMAAAANSSSMEKSY
ELPDGQVITIGNERFRCAEAMFQPSFLGMESTGMHETTYNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRVQKEIVNLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIGSIPGVIYVLPYYSVIITSLCVSDFLHHLFQ
Nucleotide sequence
Length: 1,489
>Harore.CG.MTP2014.S422.g05364.01.t
AGATTCTGTTTACACTACTTGTTAAAAAAATATATATATAAAAATCATGGATGATGATGT
TGCTGCTCTCGTTGTTGACAATGGATCGGGTATGTGCAAAGCTGGATTTGCTGGTGATGA
CGCTCCAAGAGCCGTTTTTCCGTCTATCGTAGGACGACCCAGACATCAGGGTGTTATGGT
CGGTATGGGCCAAAAAGACAGCTACGTCGGTGATGAAGCGCAAAGTAAAAGAGGAATTCT
TACCCTAAAATACCCTATCGAGCACGGCATCGTTACAAACTGGGACGATATGGAGAAAAT
CTGGCATCACACATTTTACAACGAACTTCGTGTAGCCCCGGAAGAACATCCAGTCCTTCT
TACTGAAGCTCCTCTCAATCCTAAGGCTAACAGGGAAAAAATGACACAAATCATGTTCGA
AACATTCAACACGCCGGCAATGTACGTTGCCATTCAAGCTGTATTGTCCCTCTATGCATC
CGGAAGAACTACTGGAATTGTCATGGACTCCGGTGATGGTGTTTCTCATACGGTGCCAAT
CTATGAAGGATACGCCCTTCCCCACGCCATCTTGCGTCTCGATTTAGCAGGGCGTGACCT
AACCGATTACTTAATGAAAATTCTCACCGAGAGAGGCTATTCCTTCACCACCACAGCTGA
ACGTGAAATTGTCCGTGATATCAAGGAGAAGCTTTGTTATGTCGCACTTGACTTCGAAAG
TGAGATGGCCGCTGCAGCCAACTCAAGCAGTATGGAGAAGAGTTACGAGTTACCCGATGG
TCAAGTGATCACTATCGGTAACGAGAGATTCCGATGTGCAGAGGCCATGTTCCAGCCATC
TTTCTTGGGTATGGAATCCACCGGCATGCACGAGACGACATACAACTCGATTATGAAATG
CGACGTCGATATCCGTAAGGACTTGTATGCTAACACTGTGTTATCCGGAGGCACCACCAT
GTACCCAGGAATTGCAGATCGTGTCCAAAAGGAAATCGTTAACCTCGCTCCCAGTACAAT
GAAGATTAAAATCATTGCCCCACCCGAGAGAAAATATTCCGTATGGATTGGAGGATCCAT
CTTGGCTTCTCTGTCTACCTTCCAGCAAATGTGGATCTCGAAGCAAGAATACGATGAATC
GGGTCCGTCAATCGGGTCCATACCTGGTGTAATATATGTCTTACCGTATTATTCTGTTAT
AATAACAAGTCTTTGTGTATCTGATTTTCTACATCATTTGTTTCAATAAATATTTCATTA
AATATTAGGAATTAAACCTCCGTAAGCAGAAACATCTCGCGCAGTTATTGTGTATTTGTA
GGGGTTTCGTGAAAATTAGGCTAGCAGCCTCCAAGCTAGTGGCTAGTGATGGTTTGAAAA
TCAGCAATCGAAGAAGAACAGCGTATTGATGTTGGAATATTCCAGAAAAATAGTTCATTT
TGACATCGTACAGAGATTGCAATGAAAATAAAACCTTAATACATTACAA
| PANTHER |
Actin (IPR004000) - T[1-369] 1.1E-266 |
| Pfam |
Actin (IPR004000) - T[3-369] 5.7E-145 |
| SMART |
Actin (IPR004000) - T[5-372] 2.7E-225 |
| PRINTS |
Actin (IPR004000) - T[26-35] 1.9E-57 - T[49-60] 1.9E-57 - T[61-83] 1.9E-57 - T[115-128] 1.9E-57 - T[140-159] 1.9E-57 - T[236-252] 1.9E-57 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[53-63] . - T[356-364] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[104-116] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 95.122 % | 741 | 0 |
| ACTB_HUMAN | 96.206 % | 746 | 0 |
| ACTA_HUMAN | 91.576 % | 719 | 0 |