- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S420.g03974.02.t
Possible name(s)
ARF1; ARF3; ARF5
Gene model
Location
S420 [51,090 / 59,554]
Amino acid sequence
Length: 351
>Harore.CG.MTP2014.S420.g03974.02.p
MGGLFAKFLSGRNGEPIRVCMLGLDAAGKTTVLQRLKLNPDTRTLPTIGFNVETVTPCKG
LTLTIWDIGGQDKLRQLWKHYYTTTEGIIYVVDSADQSRFSEAASELSAILQEDQMRQIP
LVVLANKQDLPGAISKNEMVGVLQLDKLQEDHPWHIEDCCAVKNVGIYESMNALSRLIKR
GKRGLPNHIGSIVDCYFRKCTLTIVDCYVRKFTLTIVDCYVRKFTLTIVDCYVRKFTLTI
VDCYVRKFTLTIVDCYVRKFTLSIEVELDPNLSDWYFRRRGQWEFNCSGDHINYYICKIK
RVIKEEAMKNTAVIKSLHAYKLQTYCKCLGLILRIHIHKVRTSIASGNDIQ
Nucleotide sequence
Length: 1,115
>Harore.CG.MTP2014.S420.g03974.02.t
AGGCATACTGACTACACATTGGTTACAAGCCTATCTACATAGGATTCTATTCTAGTGTAA
TGGGAGGTTTGTTTGCGAAGTTCCTATCCGGTCGTAATGGCGAGCCTATCAGAGTGTGCA
TGCTTGGCTTGGATGCCGCAGGTAAGACGACGGTTCTCCAAAGACTGAAGCTAAATCCTG
ACACGCGCACACTGCCAACAATCGGATTTAATGTTGAGACAGTAACACCCTGCAAAGGAT
TAACCCTAACAATATGGGATATAGGTGGACAAGATAAACTGAGACAGTTATGGAAACATT
ATTATACTACAACAGAAGGAATAATATACGTAGTCGACAGCGCCGATCAGAGTCGATTTA
GCGAAGCAGCAAGTGAACTTAGCGCTATCTTACAAGAAGATCAGATGAGACAGATCCCAC
TGGTTGTGCTAGCAAATAAACAAGACCTACCGGGCGCAATCTCGAAGAATGAAATGGTAG
GCGTACTACAATTGGACAAATTACAGGAAGATCACCCTTGGCACATAGAAGACTGCTGCG
CGGTAAAAAACGTCGGAATTTACGAATCAATGAACGCTCTTTCACGCCTCATCAAGAGAG
GCAAAAGAGGGCTACCTAATCACATTGGATCAATTGTCGACTGCTATTTCAGAAAATGTA
CACTCACAATTGTCGACTGCTATGTCAGAAAATTTACACTCACAATTGTCGACTGCTATG
TCAGAAAATTTACACTCACAATTGTCGACTGCTATGTCAGAAAATTTACACTCACAATTG
TCGACTGCTATGTCAGAAAATTTACACTCACAATTGTCGACTGCTATGTCAGAAAATTTA
CACTCAGTATTGAAGTAGAGCTTGACCCTAACCTTTCGGACTGGTACTTTCGACGGCGTG
GGCAATGGGAATTTAATTGTTCCGGGGATCACATTAATTACTATATCTGCAAAATTAAAC
GAGTAATTAAAGAAGAAGCAATGAAGAATACAGCAGTTATAAAATCCTTGCATGCTTACA
AACTACAAACATACTGTAAATGTCTAGGACTTATATTGAGGATTCATATTCATAAAGTAA
GAACGTCAATTGCTAGCGGTAATGATATCCAGTAA
| ProSiteProfiles |
Small_GTPase_ARF (IPR024156) - T[10-178] 19.578 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[14-180] 3.9E-43 |
| Pfam |
Small_GTPase_ARF/SAR (IPR006689) - T[15-176] 8.8E-62 |
| TIGRFAM |
Small_GTP-bd_dom (IPR005225) - T[16-139] 1.6E-20 |
| PRINTS |
Small_GTPase_ARF/SAR (IPR006689) - T[18-41] 2.4E-17 - T[74-99] 2.4E-17 - T[119-140] 2.4E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARF1_HUMAN | 47.541 % | 174 | 8.92E-54 |
| ARF3_HUMAN | 46.995 % | 171 | 1.45E-52 |
| ARF5_HUMAN | 44.444 % | 167 | 5.48E-51 |