- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S41.g10267.01.t
Possible name(s)
FOXC2; FOXI1; FOXI2
Gene model
Location
S41 [290,862 / 292,106]
Amino acid sequence
Length: 247
>Harore.CG.MTP2014.S41.g10267.01.p
MVLVDQQSPATAAMSSSIPPAPHAPTVQDIMDVPSVYDNIYQAGNMHMAGARATHPGHYS
LEYPGAAAAATTNPYHLWAGIGAANPYNTPSAAAYLQSYNHHSHHHHAAAVANQRSIFGP
HHHPTATDFPWLSLSTQTELFKMVRPPYSYSALIAMAIQNSKEKKLTLAHIYQYVADNFP
FYKRSRAGWQNSIRHNLSLNDCFKKLPRDEDDPGKGNYWSLDPNCEKMFDNGNFRLVISI
FSNLNLD
Nucleotide sequence
Length: 744
>Harore.CG.MTP2014.S41.g10267.01.t
ATGGTTCTAGTCGATCAACAGAGTCCCGCGACTGCAGCCATGAGTTCTTCGATACCACCA
GCACCTCATGCTCCTACTGTACAAGATATCATGGACGTACCCTCGGTATACGACAACATT
TACCAGGCTGGGAACATGCACATGGCCGGAGCGAGAGCCACTCATCCCGGTCACTACTCT
CTAGAGTATCCGGGCGCTGCGGCAGCAGCCACGACTAACCCTTATCATTTATGGGCCGGA
ATCGGAGCGGCAAATCCTTACAACACTCCGTCCGCAGCCGCATATCTACAAAGTTACAAC
CACCATAGTCATCATCATCACGCCGCTGCCGTAGCTAATCAACGATCCATTTTTGGACCC
CACCATCACCCAACTGCTACCGATTTTCCTTGGCTCTCCCTTTCTACGCAAACAGAATTG
TTCAAAATGGTCCGACCACCTTATTCCTACTCTGCTCTGATCGCCATGGCTATTCAGAAC
TCGAAGGAAAAGAAACTCACGCTGGCCCATATCTACCAGTATGTGGCAGATAATTTTCCG
TTTTACAAACGGAGTCGCGCCGGGTGGCAAAACTCGATACGACATAATCTTTCGCTCAAC
GACTGTTTCAAAAAACTTCCGAGGGATGAGGACGATCCCGGAAAAGGAAACTACTGGAGC
CTGGATCCAAATTGCGAGAAGATGTTCGATAATGGGAATTTCAGATTGGTTATATCGATT
TTTTCGAATCTTAACCTCGATTAG
| SMART |
Fork_head_dom (IPR001766) - T[143-233] 4.9E-59 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[143-235] 9.7E-44 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[144-235] 5.72E-39 |
| ProSitePatterns |
TF_fork_head_CS_1 (IPR018122) - T[145-158] . |
| CDD |
Fork_head_dom (IPR001766) - T[145-222] 6.95942E-50 |
| Pfam |
Fork_head_dom (IPR001766) - T[145-229] 1.2E-38 |
| PRINTS |
Fork_head_dom (IPR001766) - T[145-158] 8.7E-22 - T[166-183] 8.7E-22 - T[189-206] 8.7E-22 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[145-235] 37.86 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[189-195] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXI2_HUMAN | 81.651 % | 206 | 7.66E-66 |
| FOXI1_HUMAN | 55.276 % | 206 | 3.65E-65 |
| FOXC2_HUMAN | 58.654 % | 147 | 3.08E-41 |