- Molecular Tool 'Mesp>Caveolin' >
- Molecular Tool 'dnEph3 RNA' >
- Transcript 'KH2012:KH.C7.212.v1....' >
- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S416.g00019.01.t
Possible name(s)
FBN1; HMCN1; SCUBE1
Gene model
Location
S416 [8,821 / 12,005]
Amino acid sequence
Length: 163
>Harore.CG.MTP2014.S416.g00019.01.p
MNECDCTAGFEPDAAGTDCTEIVECTNAANCDQTNANCDDDAGSFTCTCNNGYTTTDSGV
TCNDIDECTMASKCDQTNAVCVNNDGSFTCTCNSGYTTTDSGVTCNDIDECTMASKCDQT
NAVCVNNDASTTYLTILFLSRSRLSYDIRNLDATTHESFLNAV
Nucleotide sequence
Length: 492
>Harore.CG.MTP2014.S416.g00019.01.t
ATGAACGAATGCGACTGTACCGCTGGATTTGAACCTGATGCCGCAGGGACTGATTGCACC
GAGATAGTGGAATGTACGAATGCAGCTAACTGCGATCAAACCAATGCAAACTGCGATGAC
GATGCTGGCAGTTTTACATGTACTTGTAATAACGGGTATACGACTACTGACAGCGGTGTT
ACATGTAACGATATCGATGAATGTACAATGGCGAGCAAATGCGATCAAACCAATGCCGTT
TGCGTGAACAACGATGGTAGTTTTACATGTACTTGTAATAGCGGATATACGACTACTGAC
AGCGGTGTTACATGTAACGATATCGATGAATGTACAATGGCGAGCAAATGCGATCAAACC
AATGCCGTTTGCGTGAACAACGATGCGAGTACAACATACCTTACAATCCTCTTTTTGTCA
CGTTCCAGGCTTTCATATGATATCAGAAATCTTGATGCTACTACTCATGAATCTTTCCTC
AATGCTGTATAA
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[21-59] 8.096 - T[64-102] 11.837 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[21-63] 0.0051 - T[64-106] 1.1E-8 |
| Pfam |
EGF-like_Ca-bd_dom (IPR001881) - T[24-62] 9.8E-5 - T[64-105] 7.5E-10 |
| SMART |
EGF-like_dom (IPR000742) - T[24-63] 0.057 - T[67-106] 0.0012 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[38-49] . - T[81-92] . |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[64-90] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 35.345 % | 82.8 | 5.46E-19 |
| FBN1_HUMAN | 39.844 % | 85.1 | 9.0E-20 |
| SCUB1_HUMAN | 39.231 % | 80.5 | 2.89E-18 |