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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S2...' > 
  2. Transcript 'Moocci.CG.ELv1_2.S48...' > 
  3. Transcript 'Moocul.CG.ELv1_2.S13...' > 
  4. Transcript 'Phfumi.CG.MTP2014.S2...' > 
  5. Transcript 'Harore.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S413.g08815.01.t

Possible name(s)

AC008764.1; MED26; TCEA2

Gene model

Harore.CG.MTP2014.S413.g08815

Location

S413 [70,350 / 78,447]

Sequences

Amino acid sequence

Length: 609

>Harore.CG.MTP2014.S413.g08815.01.p
MPLTVFEIKERLVRVIDDNGIIRDMTVASDVISLLEKISVSKEDLEKTRLGRYVNIIRKA
AKDASLAKRAKNLIKSWQQLIKQGNSQLPPSRTRPETPNSVGSSPSPPDVGMYNVKYVSK
APPVFPQNHQTSVNSETLIKKSKKTKDGTTKVNKGNRKKLKSPLPGTVTSERNIISPELK
KLSDAASPPQNDKKSPGCGQHTVSVVNQNKNGIKLTFKMQNSSSANVEDESEINVTTTGN
GSQKWREDMLERTQNDKLKENKKKHKKKKSRSRSSDRSSPPSRTPQTATPAPRLNTHEDM
YNNNKNVSGIITSQSESNLTVMSSTKKLLSKPISSPDLKNHNSQPTIDSSPSQVNNSLKR
KREQSMVNHNSSSPELTSLDDRPRNKERRMTLTYDPHTRQLQQIEKRDSSPSTSETTSPL
GGTRKSLSPKSTEVLLKQKPKLSPAKVTATRNRDPAILTATPEITKTEQEQLPQDDDKFP
TKLVPSVSLNGESSKPPSTQGGCRRGFEKRKARRKNDVMELQELFPISDSVTFDSTDSET
EDAGGFCSSLSEEKTDVGQWTGVSGCRGNNGNWYDWLEMFCVRNNDDDARLPEEEEVLPL
HILPYIELD

Nucleotide sequence

Length: 4,214

>Harore.CG.MTP2014.S413.g08815.01.t
CTCGATTACGAGACGAGCTCGCTATCCATTGAGCAACTCTCCCATTAGTATTGTCCGAAT
TCGTTGGTCATCATGACGTAATAGAAAATAGCGCCGCCTCGTGGTTGAACTTACTGATCG
GTGATGTTTATTACCCACAATGCAGCATCACCTTACAACATGTCTGTCACTCATCAAGGA
AAGACGTATTGTGGGAATGCTTATGTGAATTAGTCGAAATTGTACGGAAATGCCGCTCAC
GGTGTTCGAAATTAAGGAGCGACTCGTGAGAGTAATCGACGACAATGGAATCATCCGAGA
TATGACAGTCGCATCAGATGTTATATCGTTATTGGAGAAGATATCAGTATCAAAAGAAGA
TTTGGAAAAAACCCGTCTGGGTCGTTACGTAAACATAATTCGTAAGGCAGCAAAGGACGC
TTCTCTTGCAAAACGTGCGAAAAATTTAATAAAATCATGGCAACAGTTGATAAAACAAGG
CAATTCTCAGCTGCCTCCGTCAAGGACTAGGCCTGAAACTCCAAACAGCGTCGGTTCGAG
TCCTTCACCACCGGATGTCGGCATGTACAATGTAAAATATGTTTCGAAAGCTCCGCCAGT
GTTCCCACAGAATCACCAGACCAGTGTTAATTCAGAAACTCTCATTAAAAAATCAAAGAA
AACTAAAGATGGGACCACTAAAGTAAATAAAGGAAACAGAAAGAAATTGAAGTCGCCGCT
ACCTGGCACAGTGACCTCGGAAAGGAATATAATTTCGCCAGAATTGAAGAAACTTTCGGA
TGCGGCTTCTCCTCCTCAGAATGATAAAAAATCTCCGGGATGCGGCCAACATACAGTGTC
TGTTGTAAATCAGAATAAAAATGGAATCAAACTTACTTTTAAGATGCAAAACTCTTCCTC
TGCAAACGTCGAAGACGAGAGCGAAATCAATGTCACAACGACAGGGAACGGGAGCCAGAA
ATGGAGAGAGGACATGCTTGAACGAACACAGAATGACAAACTAAAAGAAAATAAAAAAAA
ACATAAAAAGAAAAAATCTCGCAGTAGGAGTTCGGACCGTTCTTCGCCACCTTCTCGTAC
GCCGCAGACAGCGACGCCCGCGCCACGCCTAAATACCCACGAAGACATGTACAATAACAA
TAAAAATGTATCTGGAATTATTACCTCACAATCTGAATCGAATCTCACTGTGATGTCATC
AACAAAAAAACTTTTATCGAAGCCGATTTCTTCCCCGGACTTGAAAAATCACAATTCTCA
ACCGACAATCGATTCCTCGCCTAGCCAGGTTAATAATTCTCTGAAAAGAAAAAGAGAACA
ATCAATGGTCAACCATAATTCATCCTCCCCTGAACTGACATCACTAGACGATCGACCTCG
CAATAAAGAGAGGAGAATGACCTTGACCTATGACCCTCATACACGTCAATTACAGCAGAT
TGAAAAACGTGACTCTTCACCTTCCACTTCTGAAACAACGTCACCACTCGGGGGCACGAG
AAAATCTCTTTCACCGAAGTCAACTGAGGTGTTGCTGAAGCAAAAGCCGAAACTATCTCC
AGCAAAGGTAACGGCGACGAGAAACAGAGATCCAGCAATACTTACGGCAACGCCTGAAAT
AACAAAGACAGAACAAGAACAACTACCTCAGGACGATGACAAGTTTCCAACCAAATTGGT
GCCTTCGGTTAGTCTTAATGGTGAGTCCTCGAAGCCCCCCAGCACCCAGGGGGGTTGCCG
TCGTGGGTTCGAAAAACGGAAAGCGAGACGAAAAAACGATGTGATGGAACTTCAAGAACT
TTTTCCAATTTCTGATTCGGTGACATTCGACTCGACCGATTCCGAGACCGAAGATGCCGG
TGGGTTCTGTTCCTCTTTGTCGGAGGAAAAAACGGACGTGGGTCAATGGACAGGGGTCAG
CGGTTGTCGGGGAAACAATGGCAATTGGTACGACTGGCTCGAAATGTTTTGCGTGAGAAA
TAACGACGATGACGCGAGGTTGCCGGAAGAGGAAGAGGTTTTGCCGTTGCATATTTTACC
TTACATCGAGCTGGACTGAGTTACTCAAATCATTCATAAATATAAATAGTCAAAACATAT
TGTCTTAAAAGTAATTCCACAATTTGAAACTTCAATGACATCATTTCCAAACCCTTCATT
CCGATATTACCTATACCACACCTACAGTACAGTGCCTTATCTCTTGAGATAATTAATACG
AGTGAGAGTTAAATATGAAAAGTCTTGCATTACTGAATTCAATATATATTGTACTCAGGA
TGGTACAAGCACTTGGTACAGTCAATCCCATCGCTAGCTCACCATTTTAATTGAAAGATT
GCTGCTCTTATTCTTCATATATTTTTTACAAGCACACTGGACAGACAATGCGAAATAAGA
TCATCATAAAATTAGTGCATTGATGATATAAATATATGCTTGATCTGCTAAATGAGGGGA
TAATGAACTATTTAAATAGAAGCTAACGAGCACTCCTCAAAAATTACTCAAAATGACTGA
CTGAACATATCAAATAAGTCTTTAGAACTCTCGGATTGGGTCTCTTGTTCAATATTTATT
CAAGACTGGTAATAATGGACTGTACAGTACAATATTTGTTTAACATAGTGAATAATGGAA
GTGTCCTTGGAGAAATACTAAAAATATTACGCTGAAACCGGTGCGCTGAGCATATCAGCG
CTAAACAGGCTCATTATACCATTATTATGTATGGTATAAGTTCCCAGGTTTCTTGCTGAT
ATAAGCATATACTTTTTTCCCAACATGAATTAATTAACTCAAAAAATATAAATGTGGAAA
GCTAAGCGAGCACTCCACTTGAATCGCTCAAAATATCTATTTGAACATCAAATAAGTCAT
TAGTCCTCGGAATGGTTATCCTGTTAGACATTATCGTCTATAATAATTTATACAAGTGAC
TGTATTGAAGTTTCGAACTGTGGAAATTCTTTTGGGACAAGAATTTCTGTATCCTTTCAA
GCATTTTACAACCTTCGAGCGAACGGGCAATAACAAAACGGACCTTGATTAGTATGTAGG
GGCAGGCTGGCCATGTAGGCATTGTTTAATGACCTCAGGGCTAGTGGTTGGTTCATAGGT
CGCAACCTCAAGGTTAGTAGCAGCGTCACATTTGCAGTAAAGCTAACCAGGTTTCCTTCA
CGCTGTCAAATTATGCATTCATTGAAGGAATTCATTATTCAATTTTCTGCATATCCTGCT
TTGTGTACATTCGATGCCAAAAATTCACTGTGAAAGTCGTCAAATTTAGTGAAATTGCCC
CGAAATATCATCGTTTACCGTAATGTATCATTTCTGTGCTTTATTCTCGACCGTGGCTGG
CGATTTATGTTATGGAATTCATACAGCAATGTGCTGAATTGTCACATCAATGTTTCCGTA
CGAGGAGGGTAAAGCCGGGGTGAGTCGCACATTTGATGATTGGGGCTAACCCATTGCACC
CTGGGGCAGTCGCCTCAGTATTACAACAGTTTGAATCAGCCAATCTCTGTGATCCAAATT
CCTCCACTGAAATGCAGAAGTTCCCCCCCCCGGAGTTGGATTGGATTTTCCCACTTTAAG
CTGAAGTAATAATTTCTGATGATGGTAAACTTGTATTTGGTTACGATGAGGTTGCCTGTA
TGTGCTGTTAAGGTTCTTGGTTACATGTGATATTTTTTTTTCCAGGTTTCTACTGTAAAC
TGTTTTGCTCCAGAGCAGTTGATGATATTTATTTTCTTCGCATTTTTCGGCTTTACGTTG
ATGTTAAGATGCAAAAGTATTCAATAAAACAAATAAGCAATATAATACGGTTCAGCAATG
TAAGGTGTGTGGATATGGTAAAGTTTGCCCTTTTTCCGGACAATACTAAAACTGGAAGTA
AAAGCAAGAACTACCACACGACCACACGACCACCTGTAAGTACCACCTAAGGGCAGACAA
GACACTGCTGTAGATGACATCTTGTCCGCACTTGAGTGATACCTTTGGTTTTAGTAATCT
CCCTTCTTCCTCGTCGCTTGACAAACGTTATGTTCGACCAATGCAGTAACTTAATGTTCT
GAGTTTTAATACACGATAACAGAGAACTTAATCCTGAAATATATCCCATATAGGCCCAGT
CTTTTTGCTTTCGAATGCTTTCGAAGCGGGGTGTGGGAGGGAGCATGTTGGATCTCTGGT
TAGTTCTAGAGAAC

InterProScan

Gene3D
TFIIS/LEDGF_dom_sf (IPR035441) - T[3-92] 5.9E-15
SMART
TFIIS/CRSP70_N_sub (IPR003617) - T[5-83] 3.6E-9
ProSiteProfiles
TFIIS_N (IPR017923) - T[10-84] 12.115
SUPERFAMILY
TFIIS/LEDGF_dom_sf (IPR035441) - T[12-90] 7.59E-12
Pfam
TFIIS_N (IPR017923) - T[31-81] 3.2E-9
Pfam
Med26_C (IPR031416) - T[556-591] 4.6E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MED26_HUMAN 48.148 % 82.8 1.43E-16