- Transcript 'KH2012:KH.C6.253.v1....' >
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- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S412.g08237.01.t
Possible name(s)
CSMD1; CUBN; TLL1
Gene model
Location
S412 [70,450 / 74,466]
Amino acid sequence
Length: 1,056
>Harore.CG.MTP2014.S412.g08237.01.p
MHKLMLCLCALLMALTLPKSDASYHLLVADPDQLGASKISDSTQNNRILPGIDDVLNDLV
EEPSSGDGVINTIENVKFLVKNTDPTTSAQMNLRDVIPGNAVLTGLVLNNEGYTYELTHE
LHREKSKVLQKYKDAVAGGYSSVFIGDVQPSKTLCDSCKYVDEGQKVSALINVAPRDVFS
VSLSFAVPSDYPADVHVTIELFQPASSIEGVIFSPNYPNAYPNEADVTWAIDLAEEHLAI
NATIMGFESEPDSDNLTVYDGLQTTDPVLLDVSGYPDAGISVQSTGPDMYIAFTSDASVN
TGGFALKFASITVPEITTATAVTVSTTLSPPVEPDTSSCTPIYLNNTDCDISKTTVGNEY
NISADTGSIRSPGYPMGYPVSSFFTWRIQTTGSVVYIKVIDVDVAPYGENVSIINPSNAN
WQKVIKTVEEDYLFVLMETSEVIVTFQSGPMNVGSRKRRGFYLSFWSYSPNAIDLHEYDY
SWRSISSPNYPSVYDNKDDMTWTIRAPEMYSIEMEITDINLEEFYDFLYLYQVNETKSGE
LIAKLSGVNGGGYKYYTEKNVALVHFVTDYTTTKAGFQLRYKLASHYCSDYMNNINSTNG
IFKNPDYPYYTASNRSCQWLIRVHPSKVIRFWVASYTNDHNSYVRFYDGSNTGVTQLTYF
YRTTNLNFISSNNEVLIVVERSSYEYDNRAYMMTYAAVNREDAYCTKQHTLTDSSGIITS
PSYPARYPPNSHCQWSIELEPASKIVVEFEFFDAYNNDILTFYDGETIFDTVLRSCGSCG
ADDYIVSTGNQMLVSFTTASQNSDYGFKLYYYKESQMCANQVMTITNDAGIVMSPNHPGY
YPNNVRCVFNISVTPGNVIHYYFNYFYTYSPDSLVIYDGGTTNASVLATLISSRSGYTGV
SSGNQITMVFTTDSVTQRAGFYMTYSTRSDSTLPPDHTYSYLPVTKEHNSYDPLILLSPG
FPDPYPNEIDLVWYLEANEPGNYFRFENIHSDIDHYDFLGFYNQLGTNPLSSQRIYYSNT
YYGTNSFSISSSVVTIWFHSGSKFTGQGFYLEYYFY
Nucleotide sequence
Length: 3,171
>Harore.CG.MTP2014.S412.g08237.01.t
ATGCATAAGCTTATGCTCTGCTTGTGTGCCCTGTTGATGGCACTAACTCTCCCTAAATCC
GATGCTTCATACCATCTGCTGGTTGCCGATCCAGATCAACTTGGAGCTTCAAAGATCTCA
GACTCAACGCAAAACAATCGAATTCTTCCCGGAATCGACGACGTATTGAACGACCTCGTG
GAAGAACCGTCCAGTGGCGATGGCGTAATCAACACGATTGAGAATGTGAAATTCTTGGTG
AAAAACACGGACCCAACCACGTCAGCGCAAATGAACTTACGTGATGTCATACCAGGTAAC
GCTGTTCTAACCGGGTTAGTTCTCAATAACGAAGGATACACTTACGAATTGACTCACGAA
CTTCATCGAGAAAAATCGAAGGTTTTGCAGAAATACAAGGACGCGGTCGCCGGCGGATAC
AGCTCGGTTTTTATCGGGGACGTGCAGCCGTCAAAAACATTGTGCGATAGCTGTAAATAC
GTGGATGAAGGTCAAAAAGTTAGCGCTCTAATTAACGTGGCACCGAGAGACGTGTTTTCC
GTTTCGTTATCGTTCGCTGTACCCTCTGACTACCCCGCCGATGTACACGTGACTATAGAA
CTCTTTCAACCGGCTAGTAGCATAGAAGGGGTTATATTTTCACCCAATTACCCCAACGCC
TACCCAAATGAAGCTGATGTAACCTGGGCAATTGATTTGGCCGAGGAACACCTTGCTATA
AATGCAACGATCATGGGATTCGAGTCTGAACCGGATTCCGATAACTTAACCGTATACGAC
GGTCTTCAGACCACTGATCCCGTTCTACTCGACGTATCGGGTTATCCAGATGCTGGGATT
TCGGTTCAATCAACCGGCCCCGACATGTACATTGCCTTTACATCTGACGCGTCAGTTAAT
ACCGGGGGATTCGCTTTGAAATTTGCTTCCATAACAGTACCCGAAATAACAACTGCAACA
GCGGTTACTGTGTCGACCACACTTTCTCCCCCGGTAGAACCAGATACTTCATCATGCACA
CCTATCTATCTTAACAATACGGACTGCGATATATCAAAGACAACGGTAGGGAACGAATAT
AACATTTCGGCTGATACTGGATCTATACGGAGTCCAGGCTATCCGATGGGATATCCAGTC
AGCTCCTTTTTCACATGGCGGATTCAGACAACGGGTTCGGTGGTTTACATTAAGGTAATT
GACGTAGACGTGGCTCCTTACGGCGAAAACGTTAGCATTATAAATCCGTCCAACGCAAAC
TGGCAAAAAGTTATCAAAACGGTCGAAGAAGACTACCTGTTCGTTCTCATGGAAACCAGC
GAAGTCATTGTGACATTTCAATCTGGACCGATGAACGTTGGTTCCAGGAAACGCCGTGGG
TTCTATTTGAGTTTCTGGTCTTACTCGCCAAACGCAATTGATCTACATGAATACGACTAT
TCGTGGCGCTCCATTTCTTCGCCGAATTATCCGTCCGTTTACGATAATAAAGATGACATG
ACATGGACGATAAGAGCGCCCGAAATGTACAGCATTGAAATGGAAATTACCGACATAAAC
CTTGAAGAATTCTATGATTTTCTTTACTTGTACCAAGTCAATGAAACTAAAAGCGGAGAA
CTAATCGCTAAGCTGTCTGGCGTAAACGGGGGAGGGTACAAATATTATACAGAGAAAAAT
GTCGCCCTTGTTCATTTCGTGACAGACTATACAACAACCAAAGCAGGTTTTCAACTTCGC
TACAAACTGGCTTCGCATTACTGTTCAGATTACATGAATAACATCAACTCAACGAACGGA
ATCTTCAAGAATCCCGACTATCCTTACTACACAGCTTCTAACAGATCTTGTCAATGGCTT
ATCCGAGTTCATCCATCAAAAGTTATTAGGTTTTGGGTTGCTAGTTACACCAACGACCAT
AATTCCTACGTACGCTTCTACGATGGAAGTAACACAGGCGTTACACAACTTACTTATTTC
TACCGGACCACAAACCTCAACTTCATATCGAGTAATAACGAGGTACTTATAGTTGTCGAA
CGTAGCTCATATGAATACGATAATCGCGCCTATATGATGACCTACGCTGCTGTGAACAGA
GAAGACGCCTACTGTACAAAACAGCACACATTGACTGACAGCTCAGGTATTATTACGTCA
CCATCCTACCCGGCAAGGTACCCTCCAAACAGTCACTGTCAATGGTCAATTGAACTGGAA
CCAGCATCTAAGATAGTTGTTGAATTTGAATTCTTTGACGCATATAACAACGACATTCTG
ACTTTCTACGATGGGGAGACAATTTTCGACACCGTCCTGAGAAGTTGTGGGAGCTGTGGT
GCTGATGATTACATCGTGTCAACCGGGAATCAAATGCTTGTTAGCTTTACTACAGCCTCC
CAGAATTCAGACTATGGTTTCAAACTCTACTATTACAAAGAGTCACAAATGTGCGCAAAC
CAAGTGATGACCATTACCAACGATGCAGGCATAGTTATGTCCCCAAATCACCCTGGGTAT
TACCCGAACAACGTCAGATGCGTTTTCAATATCTCCGTCACCCCTGGAAACGTGATTCAT
TATTATTTCAATTACTTTTACACCTACTCCCCAGATTCGCTCGTAATCTACGATGGGGGA
ACGACTAACGCGAGTGTCCTGGCGACTTTGATCAGTTCCCGTTCCGGATACACCGGTGTG
TCATCTGGAAACCAGATAACAATGGTATTTACAACTGATTCAGTTACGCAACGCGCTGGA
TTCTATATGACTTACTCCACAAGAAGCGACTCCACTTTACCCCCCGACCACACCTATTCC
TATCTCCCCGTTACAAAGGAACATAATTCATACGACCCCCTAATCCTGTTGTCCCCGGGA
TTCCCTGACCCCTACCCTAATGAAATCGATCTTGTTTGGTATTTGGAAGCCAATGAGCCC
GGAAATTATTTCCGATTCGAAAACATTCATTCCGACATCGACCACTATGACTTCCTTGGA
TTCTACAATCAACTGGGAACAAATCCTCTCAGTTCACAAAGGATCTATTACTCCAACACG
TACTACGGGACAAATTCATTTTCTATCAGCAGTTCTGTAGTGACAATTTGGTTTCATTCT
GGGTCAAAGTTTACCGGACAGGGATTCTATTTGGAATATTATTTCTATTAA
| Gene3D |
Sperma_CUB_dom_sf (IPR035914) - T[184-313] 2.5E-17 - T[358-467] 1.4E-6 - T[479-584] 1.0E-19 - T[592-700] 1.7E-9 - T[707-818] 3.7E-23 - T[822-931] 1.3E-21 - T[946-1056] 1.3E-10 |
| SMART |
CUB_dom (IPR000859) - T[197-311] 1.0E-10 - T[356-468] 0.0012 - T[472-584] 8.2E-21 - T[588-698] 0.0015 - T[705-814] 2.3E-23 - T[818-928] 4.3E-16 - T[944-1056] 0.0045 |
| ProSiteProfiles |
CUB_dom (IPR000859) - T[197-311] 12.784 - T[485-584] 11.866 - T[588-698] 10.341 - T[705-814] 19.353 - T[818-928] 14.183 |
| CDD |
CUB_dom (IPR000859) - T[206-310] 3.70973E-15 - T[484-581] 5.36789E-18 - T[595-697] 9.32712E-10 - T[712-812] 3.78889E-21 - T[830-927] 4.78702E-22 - T[955-1055] 7.98473E-10 |
| SUPERFAMILY |
Sperma_CUB_dom_sf (IPR035914) - T[207-310] 7.2E-19 - T[363-467] 1.7E-8 - T[481-582] 1.44E-19 - T[596-698] 3.4E-13 - T[711-812] 5.76E-24 - T[825-927] 4.71E-23 - T[955-1055] 1.96E-12 |
| Pfam |
CUB_dom (IPR000859) - T[209-308] 7.6E-12 - T[483-581] 1.5E-14 - T[595-695] 4.3E-5 - T[705-811] 3.2E-19 - T[825-925] 9.9E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TLL2_HUMAN | 25.897 % | 103 | 2.95E-22 |
| CUBN_HUMAN | 23.594 % | 163 | 1.84E-40 |
| TLL1_HUMAN | 21.554 % | 119 | 4.18E-27 |