- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C14.191.v3...' >
- Transcript 'KH2012:KH.L141.66.v1...' >
- Transcript 'Phfumi.CG.MTP2014.S5...' >
- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S410.g14376.01.t
Possible name(s)
AFG3L2; SPG7; YME1L1
Gene model
Location
S410 [57,162 / 59,502]
Amino acid sequence
Length: 725
>Harore.CG.MTP2014.S410.g14376.01.p
MHLTLLSVNIRRIIFCNKETNSKESRAWILIVALCSEHVSPSGNPVILHEHCKSAMLLFP
MFQLSHFLKRLPVIICNFNTNSTTFALSCVRNKSFTGERRCLKLYFIPNNSLSTAFCRNA
YLKRQITPLYVNNHFFRTKAGTTTTTTEKMDKKQQQHGMSESEIAEQVESLTKTFRLNQK
EAMTVRMGLMEGLRMNSSRENLENRLWKIIKEISVALFVVGVVIVILSKVMIESPMKSLM
NIYKKDYKAEAPDVSFDDVKGIDEVKQELVEIVEFLRDPERFTNLGAKLPKGMLLVGPPG
TGKTLLARAIAGEAGVPFYYASGSEFDEIFVGVGSSRIRKLFADARENSPCIIFIDEIDA
CGNKRSSSPLQPYARQTINQLLQEMDGFDEKQGILVLGATNMGNVLDKALTRPGRFDTEI
NVLPPDIKGRKEILELYTNKIIHGNNLDLEHVACLTGGMTGADLANLVNLAAIRAAQLKK
SDVGITDFEFALDRLRMGPELRSRVPTEAELQVTAFHEAGHALVAYYTPNTMPIYKATIR
QRGRALGHVAQMPTREDEHSSTCAKLLAQIDVAMGGRVAEEIMKGKDHVSTGASSDLQSA
TNIAYEFICTYGMSENLGFVAYNYEKASPETKRLIELEVNKVLEKSYQKAKDLLTTRSDQ
HKLLAKALIKYETLTLEEIKALLTSQNINIVSKTRNSKTKQIPLVAPVNPSTRDPINDPT
VADIM
Nucleotide sequence
Length: 2,178
>Harore.CG.MTP2014.S410.g14376.01.t
ATGCACCTTACGCTGCTGTCAGTCAATATTCGGAGGATAATATTTTGTAATAAGGAAACG
AATTCAAAAGAGAGTAGAGCCTGGATTTTAATAGTAGCCCTCTGTTCAGAACATGTATCC
CCATCTGGCAACCCTGTTATATTGCATGAACATTGCAAAAGCGCTATGCTATTATTCCCA
ATGTTCCAGCTTTCCCATTTCCTGAAGCGTCTTCCTGTGATTATATGTAACTTTAACACA
AATTCGACGACTTTTGCATTATCATGTGTACGAAACAAAAGTTTTACTGGAGAGAGACGA
TGTTTGAAACTGTATTTCATCCCAAATAACTCCTTATCAACAGCGTTCTGCAGGAATGCG
TATCTGAAACGTCAAATAACACCTCTGTATGTCAACAATCATTTCTTTAGAACGAAAGCT
GGTACTACTACTACCACCACCGAGAAAATGGATAAAAAGCAACAACAGCACGGCATGTCG
GAGAGTGAGATCGCAGAGCAAGTGGAATCCTTGACGAAAACTTTTCGACTCAATCAGAAA
GAAGCTATGACGGTGAGAATGGGATTGATGGAAGGATTGCGTATGAATTCATCTAGGGAG
AACTTAGAAAACAGGCTCTGGAAAATAATAAAGGAAATATCCGTCGCACTATTCGTCGTG
GGCGTGGTAATAGTTATCTTGTCTAAAGTAATGATTGAATCGCCTATGAAATCTCTGATG
AATATTTACAAAAAAGATTACAAAGCAGAAGCTCCGGACGTTAGTTTTGATGATGTCAAA
GGAATTGATGAAGTCAAACAAGAGCTTGTGGAGATTGTCGAATTTCTTCGTGACCCCGAA
AGATTTACAAACCTTGGTGCAAAACTGCCTAAAGGAATGTTGCTGGTTGGTCCGCCAGGA
ACAGGAAAAACCTTATTGGCAAGAGCCATAGCTGGAGAGGCAGGAGTTCCATTTTACTAT
GCGTCCGGATCGGAATTTGATGAAATATTTGTGGGTGTCGGAAGCTCAAGAATTCGCAAG
CTGTTTGCTGACGCGAGGGAAAATTCTCCTTGCATCATATTCATTGACGAAATAGATGCA
TGTGGAAATAAGAGATCGTCCTCGCCTCTTCAGCCTTACGCTAGACAGACTATCAATCAA
CTGTTACAAGAGATGGATGGCTTTGATGAAAAGCAAGGAATCCTTGTACTTGGGGCAACA
AATATGGGAAATGTATTAGATAAGGCATTAACACGCCCGGGACGATTCGACACTGAGATT
AATGTTTTGCCTCCCGATATCAAAGGAAGAAAGGAGATTCTGGAATTGTATACGAATAAA
ATCATTCACGGCAACAATTTGGATCTGGAACATGTAGCTTGTCTAACGGGAGGTATGACC
GGAGCTGATCTGGCAAATTTAGTAAATCTGGCTGCGATCAGAGCAGCACAGCTTAAGAAA
TCAGATGTGGGGATTACTGATTTTGAATTCGCTCTTGACAGGCTTCGTATGGGACCAGAA
CTAAGGAGTCGTGTTCCGACTGAAGCAGAATTACAAGTAACTGCCTTTCATGAGGCTGGA
CACGCTTTAGTTGCCTACTATACTCCCAATACAATGCCTATTTACAAAGCTACCATAAGA
CAGCGTGGACGTGCATTAGGGCATGTAGCTCAGATGCCTACAAGAGAAGATGAACATAGT
TCTACATGTGCTAAGCTTCTGGCTCAGATCGATGTCGCCATGGGAGGCAGAGTTGCTGAA
GAAATTATGAAAGGAAAAGATCACGTTTCAACAGGAGCATCTTCTGATCTTCAGTCAGCT
ACGAACATCGCGTACGAGTTCATCTGCACTTATGGAATGTCGGAAAATCTCGGATTCGTT
GCTTATAATTACGAAAAAGCCAGTCCGGAAACTAAACGTTTGATTGAATTGGAGGTTAAT
AAAGTATTAGAGAAATCTTACCAGAAAGCCAAAGACCTTCTAACAACACGTTCAGATCAA
CACAAACTGTTAGCGAAAGCTTTGATAAAATACGAAACTTTAACGTTGGAAGAGATAAAA
GCTCTCTTAACTTCACAGAACATAAATATTGTTTCCAAAACTAGAAATTCTAAGACTAAG
CAGATTCCTCTTGTTGCCCCGGTTAACCCGTCTACTCGAGATCCAATAAATGATCCGACT
GTGGCAGATATTATGTAA
| TIGRFAM |
FtsH (IPR005936) - T[209-683] 9.1E-161 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[250-494] 2.63E-62 |
| SMART |
AAA+_ATPase (IPR003593) - T[289-426] 1.5E-23 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[293-422] 7.9E-39 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[394-412] . |
| Pfam |
Peptidase_M41 (IPR000642) - T[486-682] 7.1E-59 |
| SUPERFAMILY |
Peptidase_M41-like (IPR037219) - T[505-686] 2.62E-56 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPG7_HUMAN | 39.013 % | 313 | 1.36E-95 |
| AFG32_HUMAN | 41.704 % | 337 | 9.6E-105 |
| YMEL1_HUMAN | 46.54 % | 502 | 2.87E-168 |