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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S8...' > 
  2. Transcript 'KH2012:KH.C1.144.v1....' > 
  3. Transcript 'Boleac.CG.SB_v3.S246...' > 
  4. Transcript 'Harore.CG.MTP2014.S2...' > 
  5. Transcript 'Harore.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S40.g15471.02.t

Possible name(s)

UPP1; UPP2

Gene model

Harore.CG.MTP2014.S40.g15471

Location

S40 [13,381 / 16,221]

Sequences

Amino acid sequence

Length: 351

>Harore.CG.MTP2014.S40.g15471.02.p
MSQSLASFVLGNNNLGENDFLYHIGLSTSDNLEKRFGDVYYVCMGGTGSRMRQFAQYMYE
RLDQPENSEVVQQNGHRVLKNVSEGAHRYALYKVGPIIFASHGIGIASLSVVLNEIFKLL
HYAKCMGNVEFFRLGTSGGLGLQPGTVVLTEKSYDSQLRPYFQQVCCGKVLELSSNTDES
LSKTLYEAAQRAGVTALIGNTMTTDDFFEGQGRIDGAFCEVTLDDKMKFLRKIHDECGIK
NIEMESLCFIAMCNRAGIKFPYYNLIHGHNHRCNGAGIADTPLNIWVNCELDEYVLLKDM
KVRIRNHMSGDKLATIASLYHHVVLPAYPSNSPLTTKRILWKCFLVYDNAN

Nucleotide sequence

Length: 1,740

>Harore.CG.MTP2014.S40.g15471.02.t
AGCTTTAGCTTGCTTGAAGTGTTAACAACAACATGAGTCAAAGCTTGGCGAGTTTCGTCC
TTGGGAACAATAATCTAGGAGAAAATGATTTTCTCTATCACATTGGGCTGTCGACGAGCG
ACAATTTGGAGAAGAGATTCGGTGACGTATATTATGTCTGCATGGGCGGAACAGGTTCGA
GAATGAGACAGTTCGCACAATATATGTATGAGAGACTTGACCAACCAGAGAACAGCGAAG
TTGTCCAACAAAACGGTCATCGAGTTTTGAAAAACGTCAGTGAAGGCGCTCATCGTTATG
CGCTCTACAAGGTCGGACCTATAATTTTTGCTAGTCATGGGATTGGTATAGCATCATTGT
CTGTTGTGTTGAATGAGATATTCAAACTTCTGCATTACGCGAAATGTATGGGCAACGTGG
AATTTTTCAGACTTGGTACCTCTGGTGGTCTGGGTTTACAACCTGGCACTGTTGTTTTAA
CCGAAAAGTCATATGATAGCCAACTGAGACCATACTTTCAACAGGTATGCTGTGGTAAAG
TGTTAGAATTGAGCAGCAATACAGATGAAAGCTTGAGCAAGACGTTATACGAAGCAGCTC
AAAGAGCTGGCGTTACGGCATTGATTGGAAATACTATGACGACGGATGACTTTTTTGAAG
GCCAGGGGCGCATTGACGGTGCGTTCTGTGAAGTGACGCTGGATGATAAAATGAAATTCC
TACGAAAAATTCACGATGAATGCGGTATAAAGAATATTGAAATGGAAAGCTTATGTTTTA
TTGCGATGTGCAATCGAGCTGGTATTAAATTCCCTTACTATAACCTCATTCACGGTCATA
ATCATCGCTGCAATGGCGCCGGCATTGCTGATACTCCACTTAACATCTGGGTCAACTGTG
AGCTAGATGAATATGTTTTGCTCAAGGACATGAAGGTTCGAATCCGCAACCATATGTCAG
GAGACAAGCTCGCTACCATTGCGTCGCTCTACCATCACGTCGTACTACCAGCTTACCCTT
CAAATTCCCCTTTGACAACAAAGCGTATATTGTGGAAATGTTTCCTGGTTTATGACAATG
CTAACTAGGTGCGGTTGCGTGCGTTACACTCCTGAATAGATTGGAAGGCGATCAAGTTGG
CGCTGACAAAGATTTACTGGAAACGTGGCAAAAAAATCTTTTTGAAATGATGGCAGAATA
CATAAAACCCAGATGAGCTCGCGACTTTTAGGTTTTCCGCCAGTATAATGTTGCTGTCTC
CAGTTTCTTCCAATATAATCACGTATTGCCGTATGCGCCAGATTTGCAAAATCAAATATT
AATAGTAACTTAAGTATAGTTTTTAAACATATATATTTTCGCTATTAAGACGTTGCAAAT
GATATGAATTAAGTTATATACGAAATATGAAATATACTGTCATCTCTGAATTGTAAATGC
AGATAAGTTCTTCAAGGTTTGTCAAGGTTATGCTTCTTGTTGATATAAGCAAATGGTTTC
TTCGCGACATGATGGATCACTGAACTATAATAATATGTATACGAAAAGCTAACCGAGCAC
TACATTTGACTTACTGAGGATGACCTGGACATATCAAATGAGCCATTAGAACTCCCGGGT
TGATCTTTTTATGTTGATGACTCAAGAATTGTAATATTTACCACTTCGGCAAGCACTATA
GCGGAACACCAATGAGCGGGACAGATCCAAGCGCTTTATGAGTGTATATGTATAGTATCA

InterProScan

SUPERFAMILY
Nucleoside_phosphorylase_sf (IPR035994) - T[17-263] 1.53E-32
TIGRFAM
Uridine_phosphorylase_euk (IPR010059) - T[17-260] 1.5E-80
Pfam
Nucleoside_phosphorylase_d (IPR000845) - T[41-260] 4.1E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
UPP1_HUMAN 43.32 % 199 8.27E-62
UPP2_HUMAN 41.935 % 207 1.15E-64