- Transcript 'Harore.CG.MTP2014.S3...' >
- Molecular Tool 'Mesp>Mek_S220E-S216D' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S40.g11771.01.t
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
S40 [122,652 / 124,862]
Amino acid sequence
Length: 408
>Harore.CG.MTP2014.S40.g11771.01.p
MSDGEEDTTAIVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANRE
KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHNVPIYEGYALPHAIAR
LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLE
KSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN
VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERCRNSNRTRLTWRVNGNEINKRL
LFTLEIFIADHHNYLTIHGICSDYFYSNDSNEIFAHPISWRNPFIQVV
Nucleotide sequence
Length: 1,227
>Harore.CG.MTP2014.S40.g11771.01.t
ATGTCTGATGGTGAAGAAGATACAACCGCAATCGTCTGCGACAACGGATCAGGATTGGTC
AAATCTGGTTTTGCTGGGGACGATGCTCCAAGAGCTGTTTTCCCGTCAATTGTCGGTCGG
CCCAGACATCAAGGTGTCATGGTCGGTATGGGACAGAAAGACAGTTACGTAGGAGATGAA
GCACAAAGCAAGCGAGGAATCCTGACTTTGAAATATCCCATTGAACATGGTATCATCACT
AATTGGGATGATATGGAAAAGATTTGGCATCACACCTTCTATAATGAACTCCGTGTTGCT
CCTGAAGAACATCCGACACTTTTGACCGAAGCTCCGTTGAATCCAAAGGCCAACAGAGAA
AAAATGACCCAAATTATGTTTGAGACCTTCAATGTGCCAGCTATGTACGTCGCTATCCAG
GCTGTTCTATCCCTCTACGCATCTGGAAGAACCACCGGCATTGTTTTGGATTCTGGGGAT
GGTGTCTCCCACAATGTTCCCATCTACGAAGGCTATGCTCTTCCCCATGCAATCGCACGT
TTGGATCTGGCCGGCCGCGATTTGACCGATTATTTGATGAAAATTCTCACAGAAAGAGGA
TATTCTTTCGTAACCACAGCTGAACGTGAAATCGTCCGAGATATCAAAGAAAAATTATGC
TATGTTGCGCTAGACTTTGAACAGGAGATGGCAACAGCAGCCTCCTCAACCTCGCTTGAA
AAGAGTTACGAACTTCCGGACGGACAAGTCATCACAATCGGAAACGAAAGATTCCGTTGT
CCGGAAACACTTTTCCAGCCATCTTTCATCGGTATGGAATCTGCTGGTATTCACGAAACA
ACTTATAATTCCATCATGAAATGCGACATTGACATCCGCAAAGACCTTTATGCAAACAAC
GTTTTATCCGGTGGAACCACCATGTATCCTGGTATCGCTGATCGTATGCAAAAAGAAATA
ACTGCTCTTGCACCAAGCACGATGAAAATCAAGATCATCGCTCCTCCCGAACGTTGCCGT
AATTCAAACAGAACACGTCTGACATGGAGAGTCAACGGAAACGAAATAAATAAACGACTT
CTATTCACATTAGAGATTTTTATTGCTGACCATCATAATTATTTAACTATACATGGCATT
TGTTCAGATTATTTTTATAGCAATGATAGCAATGAGATTTTTGCACATCCGATATCCTGG
AGGAATCCTTTTATTCAGGTAGTTTGA
| PANTHER |
Actin (IPR004000) - T[5-339] 1.8E-237 |
| Pfam |
Actin (IPR004000) - T[6-339] 4.2E-122 |
| SMART |
Actin (IPR004000) - T[8-362] 4.8E-195 |
| PRINTS |
Actin (IPR004000) - T[29-38] 9.5E-58 - T[52-63] 9.5E-58 - T[64-86] 9.5E-58 - T[118-131] 9.5E-58 - T[143-162] 9.5E-58 - T[239-255] 9.5E-58 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[56-66] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[107-119] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 97.305 % | 681 | 0 |
| ACTS_HUMAN | 97.305 % | 681 | 0 |
| ACTC_HUMAN | 97.605 % | 681 | 0 |