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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S38.g06523.02.t

Possible name(s)

PPP1R8; SLC4A1AP; SNIP1

Location

S38 [143,660 / 149,743]

Sequences

Amino acid sequence

Length: 399

>Harore.CG.MTP2014.S38.g06523.02.p
MKNKKQRKRSSDDSSSDAEDIRSHKPKKRPRDSDHSKHESKSNEKPRSESRRRSPGGNKN
TRQRRISPESRRRKSRSPSKEDKRTHPRRKDPKHSSGSHGAELTSQQRIDIKKEEDFDIR
QEELRRKRRREGNYHTDHQASNIRVKEEPDSDHDRRRTTTTTTQRNQDDRRRQARNRRDE
ERRNNEEMRREEWGRREREGGGNAEALAGEEAPIEKEKPNLGLSGALTEDTNSYKGVVIK
YNEPPEARVPKKKWRLYPFKGDEALKVLHLHRQSAYLLGRLRRIADIPIDHPSCSKQHAV
FQFRLVEENRNGRKRRIVKPYIIDLESGNGTFVNNVQIDPRRYVELKEQDIIKFGFSSRE
YVLLHDKSDTTEIDSEEIILWCFGPKLEGYTDEVSHKAQ

Nucleotide sequence

Length: 3,412

>Harore.CG.MTP2014.S38.g06523.02.t
ACGCGTTAGAAATTAAAGCGAGATAGATATTTTGGAGAGGCCGTAAACAGAATTAATATT
TTACCAGAAACGAAAGGTTGGGATTGTTGGGATTATCATTCAAATGAAGAACAAGAAACA
AAGAAAACGGTCCTCAGATGATTCCTCATCAGACGCTGAGGATATTCGCTCTCACAAACC
TAAAAAACGACCTCGCGATTCCGACCATTCCAAACACGAATCAAAATCCAACGAAAAACC
TAGATCAGAATCTCGTCGACGTTCACCAGGTGGTAATAAAAACACAAGACAACGTCGTAT
TTCTCCCGAATCAAGAAGAAGGAAAAGTCGGAGCCCGAGCAAAGAAGATAAACGTACACA
TCCCAGGAGAAAAGACCCAAAACATTCCTCCGGTTCACATGGAGCAGAATTAACTTCCCA
ACAGAGGATAGACATCAAAAAAGAAGAGGATTTTGACATTAGACAGGAGGAATTGAGAAG
AAAAAGAAGAAGAGAAGGAAATTATCACACTGATCATCAAGCTTCAAATATTCGTGTCAA
AGAAGAACCAGATTCAGATCATGATAGAAGGAGAACAACAACAACAACAACACAGAGAAA
CCAAGATGATAGGAGAAGACAGGCTAGGAATAGACGGGATGAGGAGAGGCGAAACAATGA
AGAAATGAGAAGAGAGGAGTGGGGTAGAAGAGAAAGGGAGGGAGGAGGAAATGCAGAGGC
GTTAGCAGGTGAAGAGGCTCCAATAGAAAAGGAAAAACCAAATTTGGGACTTTCTGGAGC
CCTCACCGAAGATACCAATAGTTATAAAGGAGTTGTAATAAAATATAACGAGCCGCCAGA
AGCACGTGTACCAAAGAAGAAATGGCGGCTCTATCCTTTTAAGGGTGACGAGGCACTTAA
GGTACTTCATCTCCATAGGCAGAGCGCCTATCTTCTTGGCAGATTAAGACGTATCGCTGA
TATACCGATCGACCACCCTTCATGTTCTAAGCAACATGCCGTATTTCAGTTCAGACTCGT
TGAGGAAAATAGAAATGGAAGAAAGAGGAGAATCGTCAAACCATACATCATTGATCTAGA
ATCAGGCAATGGAACTTTCGTCAACAATGTCCAAATCGACCCAAGAAGATATGTTGAACT
TAAGGAACAGGATATTATAAAATTTGGATTCAGTTCCAGGGAATACGTTCTTCTGCATGA
TAAATCGGACACTACCGAGATCGATTCAGAAGAGATCATTTTGTGGTGCTTTGGACCTAA
ACTTGAAGGTTATACTGATGAAGTTTCACACAAAGCGCAATAGTCTGATGTTCTAAGTGT
TAAAACAATACTTTGTGGCACAGCGAGGGGTCGATGATACCTTGGTCTTATCCTTCGTGA
ATGCAGAATTTAAAACTGGTGTCTAATTTTATTCAGTACTCTACCGCATGGCAGTTTTTA
TGTAAATCTGATAGGACATAAATCATTTTGCCTCTGTGCTTGTCTTACTGAAAGCCACAT
AAATGTGAAAGGGTGGTGTGAATATTTTTTATGCTTACCTAAGCAAATTTTCTATTGAAA
TCAAACAACTGGCACGTTTCATCGTAATTTATTTCGTAGCTAAACGGCGGTATATAGTCT
GCGAGAATTTCTACTTGCCATTCCCGAGGTATATCTTCCGATTCCGGTGCGATTATCGCA
ATATCCTTCCCCGCTGCTTCGTACGCCTTTATGGCGTTCTGATTGTAGTAAGGGACAGTT
TGCAGCCATTCAACAGTAGCTTTGACCCCGAGTTGTTCCCATAGTAGGATTTGGAGATAC
ATAGCATGTCGAGGGAAGATGTTAGTCCAGTCCTTGTAAGGTATGCCAAACCACATCAAG
CGAGGCAGGTAGATATCCATATCGATGTAACATGTCATTGATATCATCCAATATTTTTGT
TCCGGAAATATTTTAAAGACATTGACGACCAGCGTTTTCAAAGGAATCCCGAGTATTTCA
AAAACATGCAGAATGTGATTCTCTATAACGAGACTATTCTCCGTTTTCAATGTTTCGTTA
ATAATGTCCCAGTCCAGAGATACGAGCGTTCCATTTAGTTCGTAAATCTTTATCTCTGTT
ATCATGGCTTTGTCCCTCAATAGGATTTCACTGCTGGTAGGGTAGGGTATCCATATTGAT
TTGTCTTCAGTAGTCGTAGGTAATGTCGCATTGGTAGGCGGTGTTTTAGTCGTAGTGCTA
TGTGCTGTATATTTCATTGTTGACGTGGTTGTACTTTTTGGAAATTCGGTGGACATTGTA
GTTGCCATAGTAATGTAACTTGTGCTTGTTGGACGGGCTGAGGATGTTCTTTGCGTTGCG
TATCCCGCAGTGGCTGCTATATACTTCAACGTTTATGAATCGTTAGTTGGGAAGAAAATA
CCTCGTGGGTAGAGGGTAAGGCTGCCTACTGTTAACGTGAGTTAGAGTTGAACAAATAAC
TAGGGTAAGTTATTACCCAATCCAGGTCGTTGTTTTTCAGTTCAGTTTTATCTGCAGGTA
GTTTACGGAATATCCCAAAATGGGAGAAAGTATTTATTCAACCCTTTGGCGCAGGTATGA
GCTCTACAGAATGCCCTCTAGAGTTGGGTTTTGACATGAACGTCCAATAGGATACTAACC
CAAGGAGTAATCATCTGGTACAGGAGGTTTACATTGTTGGCAGAATTGCGACCAGAGGTG
GTATTGATGCCACATTTTTCCCAGCTTAAAATTTTCTCAATGAACAGAGCAACAATCATG
AATCCGACAAGTGATATTCCCACACTTAACATCATGACGGTGTAACCGTCCGGATCTTTG
AACGAAAGAAACACTTTTTATTAAAATGCCTTCTGTTCTAGCTAACAAAACTCCTTCGTA
ATATCCTACCATTGCCTTCAGCATTTAAATCCATCACTTCCGAGGGTTTGCGTAAAGAGT
TTACATCAGTGTAAGATGTCTTTTTTCTATGTTGCCTTTGTTCATCCTTTCGTTCTCTTC
CCCGTTTATGTTGCTTCTTCCGCCGTTCCTTTCTCCCGCGTTTTCGTGCTTTCTCTTCAG
GACTTCTTTGTTCCTTTTGTCCATGCTTACGCTTCTTCTTATCCACCTTATCAGATCCTA
CCGTAGGAAAAAGTGTTGTGACTCTGCTTTTAAAGTCTAGAGGGTTGTCTTCATTTTCTG
GTACCGTCCTTGAGCTTTTGTGATCTAAGCTTGGAAATATTGAGTAGTAAGAAGAACCAT
CACCGGGAAGCTGCTTGATAAAATGAACACGTTTTTCGCTTTTTATTTTAGTGTGTAAAT
ATTCAGATACAGGTGATTCACCGTGCTTCTCCTTTTTTGATATCATAACATCCGATTACA
GCACAACCTTTCCTGCTTCAATTCATAATCTTTCCTGTGTAACAAACTTTCG

InterProScan

SUPERFAMILY
SMAD_FHA_dom_sf (IPR008984) - T[243-366] 4.97E-26
CDD
FHA_dom (IPR000253) - T[253-355] 7.9262E-25
SMART
FHA_dom (IPR000253) - T[275-338] 1.1E-12
ProSiteProfiles
FHA_dom (IPR000253) - T[276-338] 10.216
Pfam
FHA_dom (IPR000253) - T[276-355] 1.9E-16

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNIP1_HUMAN 48.387 % 271 6.36E-88