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TRANSCRIPT CARD

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  1. Transcript 'Moocul.CG.ELv1_2.S12...' > 
  2. Clone 'ma204o10' > 
  3. Transcript 'KH2012:KH.C4.351.v1....' > 
  4. Transcript 'KH2012:KH.C12.47.v2....' > 
  5. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S38.g06523.01.t

Possible name(s)

PPP1R8; SLC4A1AP; SNIP1

Gene model

Harore.CG.MTP2014.S38.g06523

Location

S38 [146,792 / 149,693]

Sequences

Amino acid sequence

Length: 403

>Harore.CG.MTP2014.S38.g06523.01.p
LIFYQKRKVGIVGIIIQMKNKKQRKRSSDDSSSDAEDIRSHKPKKRPRDSDHSKHESKSN
EKPRSESRRRSPGGNKNTRQRRISPESRRRKSRSPSKEDKRTHPRRKDPKHSSGSHGAEL
TSQQRIDIKKEEDFDIRQEELRRKRRREGNYHTDHQASNIRVKEEPDSDHDRRRTTTTTT
QRNQGCDDRRRQARNRRDEERRNNEEMRREEWGRREREGGGNAEALAGEEAPIEKEKPNL
GLSGALTEDTNSYKGVVIKYNEPPEARVPKKKWRLYPFKGDEALKVLHLHRQSAYLLGRL
RRIADIPIDHPSCSKQHAVFQFRLVEENRNGRKRRIVKPYIIDLESGNGTFVNNVQIDPR
RYVELKEQDIIKFGFSSREYVLLHDKSDTTEIDSEESEENDTD

Nucleotide sequence

Length: 1,365

>Harore.CG.MTP2014.S38.g06523.01.t
AATTAATATTTTACCAGAAACGAAAGGTTGGGATTGTTGGGATTATCATTCAAATGAAGA
ACAAGAAACAAAGAAAACGGTCCTCAGATGATTCCTCATCAGACGCTGAGGATATTCGCT
CTCACAAACCTAAAAAACGACCTCGCGATTCCGACCATTCCAAACACGAATCAAAATCCA
ACGAAAAACCTAGATCAGAATCTCGTCGACGTTCACCAGGTGGTAATAAAAACACAAGAC
AACGTCGTATTTCTCCCGAATCAAGAAGAAGGAAAAGTCGGAGCCCGAGCAAAGAAGATA
AACGTACACATCCCAGGAGAAAAGACCCAAAACATTCCTCCGGTTCACATGGAGCAGAAT
TAACTTCCCAACAGAGGATAGACATCAAAAAAGAAGAGGATTTTGACATTAGACAGGAGG
AATTGAGAAGAAAAAGAAGAAGAGAAGGAAATTATCACACTGATCATCAAGCTTCAAATA
TTCGTGTCAAAGAAGAACCAGATTCAGATCATGATAGAAGGAGAACAACAACAACAACAA
CACAGAGAAACCAAGGTTGTGATGATAGGAGAAGACAGGCTAGGAATAGACGGGATGAGG
AGAGGCGAAACAATGAAGAAATGAGAAGAGAGGAGTGGGGTAGAAGAGAAAGGGAGGGAG
GAGGAAATGCAGAGGCGTTAGCAGGTGAAGAGGCTCCAATAGAAAAGGAAAAACCAAATT
TGGGACTTTCTGGAGCCCTCACCGAAGATACCAATAGTTATAAAGGAGTTGTAATAAAAT
ATAACGAGCCGCCAGAAGCACGTGTACCAAAGAAGAAATGGCGGCTCTATCCTTTTAAGG
GTGACGAGGCACTTAAGGTACTTCATCTCCATAGGCAGAGCGCCTATCTTCTTGGCAGAT
TAAGACGTATCGCTGATATACCGATCGACCACCCTTCATGTTCTAAGCAACATGCCGTAT
TTCAGTTCAGACTCGTTGAGGAAAATAGAAATGGAAGAAAGAGGAGAATCGTCAAACCAT
ACATCATTGATCTAGAATCAGGCAATGGAACTTTCGTCAACAATGTCCAAATCGACCCAA
GAAGATATGTTGAACTTAAGGAACAGGATATTATAAAATTTGGATTCAGTTCCAGGGAAT
ACGTTCTTCTGCATGATAAATCGGACACTACCGAGATCGATTCAGAAGAGAGTGAAGAGA
ATGATACTGATTGAAACATGTCATTTTGTGGTGCTTTGGACCTAAACTTGAAGGTTATAC
TGATGAAGTTTCACACAAAGCGCAATAGTCTGATGTTCTAAGTGTTAAAACAATACTTTG
TGGCACAGCGAGGGGTCGATGATACCTTGGTCTTATCCTTCGTGA

InterProScan

SUPERFAMILY
SMAD_FHA_dom_sf (IPR008984) - T[262-385] 5.16E-26
CDD
FHA_dom (IPR000253) - T[272-374] 2.28914E-24
SMART
FHA_dom (IPR000253) - T[294-357] 1.1E-12
ProSiteProfiles
FHA_dom (IPR000253) - T[295-357] 10.216
Pfam
FHA_dom (IPR000253) - T[295-374] 1.9E-16

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNIP1_HUMAN 46.518 % 269 3.81E-87