- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S38.g02935.01.t
Possible name(s)
FZD10; FZD4; FZD9
Gene model
Location
S38 [241,921 / 251,140]
Amino acid sequence
Length: 491
>Harore.CG.MTP2014.S38.g02935.01.p
MKSSLLILFTLLLVDRSYTRSAPSSLGNRRSSSAEPSLSDFGSRNNYRHDKNPALLAEEG
QCQRIEISLCKGLGYNMTRMPNRFGHERQKEAELMLQTFNPLVQYNCSESLRFFLCSLHV
PMCDSRHKFPIGPCEGMCLLVKKKCSPVMSSFGFDWPKDFNCSDFPKKNTPQTMCMEGHK
PKPTEPPLVVEDQLQCRDPEIQVGDRCAWKCGYDQGIFSAADKEFADIWMSVWAGLCFLS
TIFTVLTFLIDSWRFRYPERPIIFLSMCYSIYSIAYIMRLILGRELISCEKSPTGEMYVI
QEGLSNTGCAIVFLLLYFFGMASSLWWIILTLTWFLAAGMKWSHEAIAMHSSYYHLVAWS
VPAIKTIVILIMRQVDGDELTGLCYVGNQNADALTGFVLAPLFTYLVIGTSFLLAGFVSL
FRISRNCRQNSFGLNFVVLCAGLLQMMRMTCSRTAYPTGSVEFPALRFLLDVIQFPVVLG
DHITNLQYSSL
Nucleotide sequence
Length: 1,986
>Harore.CG.MTP2014.S38.g02935.01.t
CATCAAGCTGTATTCATATTATTAATATTATTCCACCCAGGGATTCAAAGCAATTACATT
GATGTGAATATACATTAGCAACGATGAAGAGCTCTCTTCTGATTCTTTTTACACTGCTTC
TAGTTGATCGGTCGTATACGCGATCGGCACCGTCGTCGCTCGGCAATCGTAGGTCTTCTT
CGGCGGAACCGAGCCTCTCCGATTTCGGCTCCAGGAATAATTACCGCCACGATAAAAATC
CAGCTTTGCTGGCGGAGGAAGGACAATGCCAGAGAATAGAAATCTCTTTGTGCAAAGGGC
TTGGATATAATATGACTCGAATGCCGAATAGGTTCGGACACGAGAGGCAAAAAGAAGCTG
AGCTGATGCTGCAGACGTTTAATCCACTCGTACAATACAATTGTTCGGAATCTCTGCGAT
TTTTTCTCTGTTCTCTACATGTTCCAATGTGTGATTCAAGACATAAATTCCCTATAGGCC
CATGCGAGGGAATGTGTCTTCTGGTCAAGAAGAAATGTTCACCAGTCATGTCTTCATTCG
GATTCGATTGGCCGAAAGATTTCAACTGCAGCGATTTTCCGAAGAAGAACACTCCTCAGA
CGATGTGTATGGAAGGACACAAACCTAAGCCGACAGAACCTCCATTAGTCGTTGAAGATC
AACTACAATGCAGAGATCCTGAGATTCAGGTTGGAGATAGATGCGCCTGGAAGTGCGGAT
ACGATCAAGGAATCTTCTCGGCCGCTGACAAAGAATTTGCCGACATCTGGATGTCGGTTT
GGGCCGGACTTTGCTTCCTGAGTACGATCTTCACAGTTCTAACGTTTCTGATCGATTCCT
GGAGATTTCGATACCCGGAAAGACCGATCATATTTCTGAGCATGTGCTACAGCATATACA
GCATTGCTTATATTATGAGGTTGATATTAGGAAGAGAACTTATATCATGCGAGAAGAGTC
CGACTGGGGAAATGTATGTTATTCAGGAAGGGTTGTCAAATACTGGATGTGCTATTGTCT
TTCTTCTTCTCTACTTCTTTGGGATGGCAAGCTCGCTGTGGTGGATTATCTTAACGCTAA
CATGGTTCTTAGCAGCAGGTATGAAATGGTCTCACGAAGCGATTGCCATGCACAGTTCAT
ATTACCACTTGGTGGCCTGGTCAGTACCTGCCATAAAGACAATCGTCATCCTGATAATGA
GACAGGTTGACGGCGATGAGCTGACTGGACTGTGCTATGTTGGAAACCAAAATGCAGACG
CTTTAACAGGTTTTGTGCTAGCCCCTCTCTTCACCTACCTGGTGATAGGTACCTCGTTCT
TACTAGCCGGATTCGTCAGCCTGTTTCGCATAAGCCGAAATTGTCGGCAAAACTCTTTCG
GTTTGAATTTCGTGGTTTTGTGTGCGGGATTGCTTCAGATGATGCGTATGACATGCTCAC
GCACTGCGTATCCAACTGGTTCAGTGGAATTTCCCGCTCTCCGATTTTTACTGGACGTAA
TACAGTTTCCAGTAGTTCTGGGAGATCACATAACTAACTTGCAATATTCATCTTTATGAC
TCCAGCAGATGGCACAGTACCAGATATTTTCGAACTCCATTTTAGAATATTTTAAGTCGT
GCTTCTCTGTGATTTACTTAAACAGGTCTGTATATTATCAGGGACAATTCAACCCATTCA
CCCCCAAAGGGAGTACCATACTTTCTCCCAAATTTGCTTTTGTTGTACTGTACTGTTATC
AACGTACTAATTTTTGTTCTGAATACACTTCCAATTATATTGCCGCTCTGCGAGTGATGG
TGGCCTCTTTTGGTCACGAGATAATATTTCGTGCTACCTATAGGGGTTATGAGGTCAAGA
GAAAACTGTGTTGTCTTCAAGTGGATGAATTTATTCGCTGTAATGTGATACAGCAATGTC
GAGCGCAGATAACCACGGTTACGTCATAGATCGTATATGGAGAAAGACGGTAAAGAGACA
GATAAA
| Gene3D |
Frizzled_dom_sf (IPR036790) - T[55-181] 3.2E-41 |
| ProSiteProfiles |
Frizzled_dom (IPR020067) - T[57-178] 25.792 |
| PANTHER |
Frizzled/SFRP (IPR015526) - T[58-429] 1.0E-165 |
| PANTHER |
FZD4 (IPR026551) - T[58-429] 1.0E-165 |
| SUPERFAMILY |
Frizzled_dom_sf (IPR036790) - T[60-178] 1.44E-38 |
| SMART |
Frizzled_dom (IPR020067) - T[61-180] 1.8E-48 |
| Pfam |
Frizzled_dom (IPR020067) - T[62-169] 4.6E-29 |
| SMART |
Frizzled/Smoothened_TM (IPR000539) - T[216-481] 1.6E-115 |
| Pfam |
Frizzled/Smoothened_TM (IPR000539) - T[218-431] 3.3E-95 |
| ProSiteProfiles |
GPCR_2-like (IPR017981) - T[226-425] 33.68 |
| PRINTS |
Frizzled/Smoothened_TM (IPR000539) - T[229-251] 2.8E-60 - T[257-279] 2.8E-60 - T[311-335] 2.8E-60 - T[354-377] 2.8E-60 - T[399-421] 2.8E-60 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FZD9_HUMAN | 51.786 % | 416 | 2.51E-140 |
| FZD10_HUMAN | 51.306 % | 434 | 6.78E-148 |
| FZD4_HUMAN | 62.953 % | 509 | 7.15E-178 |