Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S38.g01552.01.t

Possible name(s)

SQSTM1

Gene model

Harore.CG.MTP2014.S38.g01552

Location

S38 [428,515 / 431,891]

Sequences

Amino acid sequence

Length: 268

>Harore.CG.MTP2014.S38.g01552.01.p
MTLQFKAYLVRGQKNDVKEIRRFAIDTDVSSNYDYLRTKTHRDKPEKKEDDGASASSWTN
QFDNFCNDWQRFAFGHPHPWQPPHGHHPPPPPHGHHAHPPPFGGHDPTHFGQHPPPPHAT
AYLSTVGQMVANYLQPLGIDVDIDVEHKGKRTKCAESEKDDAKAATTEGDDQQSRKSPGS
ENEWTVVNEGSKQNNTDDDTQAEATAPPTETEIKPPSNIDPRLAEALKQMFTMGFSDEGG
WLSRLLEAHDYNIPRALDAIQPAAGHRA

Nucleotide sequence

Length: 1,142

>Harore.CG.MTP2014.S38.g01552.01.t
TTATAGGTATATTACAGTACCATACTAATAATAAAAAGCAAGAACAATGACTCTGCAATT
TAAAGCTTATCTGGTGAGAGGACAAAAGAATGATGTGAAGGAAATACGGCGTTTCGCTAT
CGATACCGACGTCTCATCCAACTATGATTATTTGAGGACTAAGACACACCGTGATAAACC
AGAGAAGAAAGAGGACGATGGTGCATCTGCGAGCTCATGGACTAATCAGTTTGATAACTT
TTGTAATGATTGGCAACGCTTTGCTTTTGGTCATCCCCATCCCTGGCAACCTCCACATGG
ACATCATCCGCCGCCACCTCCTCATGGACATCATGCACATCCTCCTCCCTTTGGTGGACA
CGATCCTACTCATTTTGGACAACACCCACCCCCGCCTCATGCCACTGCTTACTTAAGCAC
TGTTGGTCAAATGGTTGCTAATTATTTACAACCACTTGGCATTGATGTAGATATTGATGT
GGAGCATAAGGGAAAGCGAACTAAATGTGCCGAAAGCGAGAAGGACGATGCAAAAGCTGC
TACGACTGAAGGGGATGATCAACAATCAAGAAAATCACCTGGATCTGAAAACGAATGGAC
TGTTGTAAATGAAGGTAGTAAACAGAATAACACAGATGACGATACGCAAGCAGAAGCTAC
AGCTCCGCCTACGGAAACAGAGATAAAACCTCCAAGTAATATTGATCCTCGTTTGGCAGA
GGCACTCAAACAAATGTTTACGATGGGGTTCAGTGATGAAGGTGGATGGTTATCGCGTTT
GTTGGAGGCACATGATTACAACATTCCCAGAGCGCTAGATGCCATCCAGCCTGCCGCTGG
TCACAGAGCTTAAGTTTAATGAAGCTCTGTTGTCGTGCATGTTGTAAATAATGTTAGGCT
ACCCTATAATTTGTAATGATTATCATCGTCATCTGCTTATTGCATGGTACGGCTTATTTT
TTATTTTCCTCTGAACTGGTCTTATTATTTTAGTCATTCATAAAATAGTATAGTGATAAA
ATAATTTTTAACCAAAGTAGTTTATAGATCTTTATAACTTTTGTTGTTATATTAATGTAA
ACCTTGTGCATGCTTGGGGAGAGTTATTTTACTTTTTGTTTAATTTTCTTCGAATCGAGA
AT

InterProScan

Pfam	SQSTM_UBA (IPR033741) - T[216-261] 9.0E-18
SUPERFAMILY	UBA-like_sf (IPR009060) - T[217-262] 5.03E-15
CDD	SQSTM_UBA (IPR033741) - T[222-261] 1.33553E-18

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value