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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C3.616.v1....' > 
  2. Transcript 'Boleac.CG.SB_v3.S120...' > 
  3. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S386.g07511.01.t

Possible name(s)

PBX1; PBX2; PBX3

Gene model

Harore.CG.MTP2014.S386.g07511

Location

S386 [0 / 10,995]

Sequences

Amino acid sequence

Length: 277

>Harore.CG.MTP2014.S386.g07511.01.p
MDEQNSYGTQGFMQNQMHGGGDYRGPVNEVDSQQGVMPLGRKQDISDVLQQIMTITDQSL
DEAQARKHALNIHRMKGALFQVLCEIKEKAVLSMRSPPEDDATDPQQLRLDRMLESEGVS
GPEGTGSAAAVAAAASSGGNDSAEHSDYRAKLAQIRQIYHSELEKYNQACNEFTTHVMNL
LREQSRTRPISNKEIQRMIGIITKKFNNIQLQLKQSTCEAVMILRSRFLDARRKRRNFSK
QATEVLNEYFYSHLSNPYPSEEAKEELARKCSITVSQ

Nucleotide sequence

Length: 893

>Harore.CG.MTP2014.S386.g07511.01.t
TATTCAGGTTAATTTAGCAAATAATCCAACAAATATTTTAATCTGAATGCTGATTCTTAA
TAATGGATGAACAAAATTCATACGGAACACAGGGTTTTATGCAGAACCAGATGCATGGTG
GAGGAGATTATAGAGGACCCGTGAATGAAGTTGACAGCCAACAGGGTGTGATGCCACTCG
GTAGAAAGCAGGATATCAGCGATGTTCTACAACAGATAATGACAATAACTGATCAAAGTC
TAGATGAAGCTCAAGCAAGGAAACACGCGCTGAACATTCACAGAATGAAAGGAGCGTTAT
TCCAAGTTCTCTGCGAGATCAAAGAGAAAGCAGTTCTGAGCATGAGATCACCTCCTGAAG
ATGATGCTACTGATCCACAGCAGCTGAGACTTGATAGAATGTTAGAATCCGAGGGAGTGT
CTGGTCCCGAAGGCACGGGTTCTGCGGCAGCAGTTGCCGCAGCGGCATCGAGCGGCGGTA
ATGACAGTGCGGAACACAGCGATTACAGAGCGAAGCTTGCTCAGATCAGACAAATATATC
ATTCTGAACTTGAGAAATACAATCAGGCATGCAATGAATTCACGACGCATGTCATGAATT
TACTGAGAGAACAAAGTAGAACTCGTCCAATATCAAACAAAGAGATTCAGAGAATGATCG
GGATCATAACGAAGAAGTTCAATAACATTCAACTTCAACTGAAGCAAAGTACATGTGAAG
CTGTTATGATATTGAGATCAAGATTCTTGGATGCAAGACGTAAACGGCGCAACTTCAGCA
AGCAAGCTACAGAGGTTCTGAACGAATATTTCTATTCTCATCTCAGCAATCCATACCCAA
GCGAAGAAGCCAAGGAAGAACTGGCAAGAAAATGTAGCATAACTGTGTCACAG

InterProScan

Pfam
PBX (IPR005542) - T[42-230] 2.2E-86
ProSiteProfiles
Homeobox_dom (IPR001356) - T[229-277] 10.074
SUPERFAMILY
Homeobox-like_sf (IPR009057) - T[231-277] 1.92E-10
CDD
Homeobox_dom (IPR001356) - T[232-277] 2.65405E-8
Pfam
Homeobox_dom (IPR001356) - T[232-277] 1.9E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PBX1_HUMAN 78.423 % 379 1.44E-131
PBX2_HUMAN 77.178 % 369 1.01E-127
PBX3_HUMAN 79.668 % 380 6.28E-132