- EST 'FF931723.1' >
- EST 'FF723631.1' >
- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S381.g09449.01.t
Possible name(s)
CDC16; TTC28
Gene model
Location
S381 [77,291 / 83,102]
Amino acid sequence
Length: 879
>Harore.CG.MTP2014.S381.g09449.01.p
MSVPHEKKDSGALLYYNTSSSTSGARSKSKASGVQQPSVWELEVQVETMIEIADKAKRYF
ESEKYQIAGENLKQLLELQKDPWEQMETLQQIAECHLMYDQPCVYEINRIIGICKALQLS
PGDVKSAADKHLEESHLVRAYAMYVCASKMYLTDSRPNDAVVGIRNCIWSMREIVDGMKD
QTRLRRIASRYGIPSMHDMLKELRQIKDVADDVKVRNEASCLNNIGLSHRNLREYNKGID
YYHEGLKLMRDKLGTNSVKYQIFGTLLNNIGLAIYNLGNYAEAVTYYQQAIEAYQKAEDF
STEEEKQKNIEIMKDNLRIFRSEMSYKNKLLTNDKAELLKNMRSLFKDNLIPKHETLTLE
KIDLSDEQLTEEDMDAVTYVVSHCTNLHILDLHNCCLPKRSVRRLEQELHSSVQIGFINI
KRNKDLGLADLLAAVDIKKKCNVKKMLYDRNLTKEEKEEFDLYLKRNENIADKVEYDTKP
LVKRPHEMTIKQSKDERLREGSISPSQVFLIGPAGGTIELDDCKVIFSKGAFDGIARVQA
AEQVDSSKWPDGYIGIGPMLYVKCDREILKPVKVEMTIWCVSDGSEESNHTEVEILHKST
DSKCWNTIATSKLQPLCHVEFECMDFSPILAAIKKSLLNLILRRQIFLISGLLYINNKHE
FHCGIFCDNACLKEQTESDLMKLGGKLKIIFRRRHKFALGDKFKLKLFCEQNNFSFAYPP
DNDAHCLEINEEFVENPQALFYTYLREIQPHEEWDLDMLAEVYNNESRLEYCPFIHTWTP
RNAVNKGASTSQQDPPVPSVTSPDHTDPASTPTSPDQPSTSGIHAPTSSTAADREIKTEV
HVNLSIPNLSIQGGDTADIMLKDQAKANVKQKDGQHHIS
Nucleotide sequence
Length: 2,640
>Harore.CG.MTP2014.S381.g09449.01.t
ATGAGTGTGCCGCATGAGAAAAAAGATAGCGGAGCACTGCTATATTACAATACATCATCT
TCAACATCGGGAGCAAGAAGTAAATCAAAAGCGAGTGGAGTCCAACAGCCGAGTGTGTGG
GAATTGGAAGTTCAAGTCGAGACGATGATTGAAATTGCAGATAAAGCAAAGCGTTACTTT
GAAAGCGAGAAATATCAGATAGCTGGAGAGAATTTGAAACAACTTTTGGAACTTCAGAAA
GATCCATGGGAACAGATGGAAACATTACAACAGATTGCAGAGTGTCACCTCATGTATGAT
CAACCATGCGTGTATGAGATAAACAGAATTATTGGAATCTGCAAGGCACTTCAACTTTCA
CCAGGTGACGTCAAATCAGCAGCAGACAAACATCTGGAAGAATCCCATTTAGTTCGTGCT
TACGCCATGTATGTATGTGCAAGTAAAATGTACTTGACTGACAGCAGACCAAATGATGCG
GTTGTAGGTATAAGAAATTGTATTTGGAGTATGAGAGAGATTGTCGACGGAATGAAGGAT
CAAACACGTTTACGAAGAATTGCATCGAGATACGGGATTCCATCGATGCATGATATGTTA
AAAGAACTTCGTCAAATCAAAGATGTAGCTGATGACGTGAAGGTGAGGAACGAGGCATCG
TGTTTGAACAACATTGGTTTAAGTCACCGTAACCTACGTGAATACAACAAAGGTATCGAT
TACTACCATGAAGGTCTCAAGCTCATGCGAGATAAGTTGGGAACTAATTCTGTCAAATAC
CAGATATTTGGTACTCTATTGAACAACATCGGCCTCGCGATATACAACCTGGGAAACTAT
GCAGAAGCTGTGACGTATTACCAACAAGCGATCGAAGCATATCAGAAAGCGGAAGATTTT
TCAACTGAAGAAGAGAAGCAGAAGAACATTGAGATAATGAAAGATAATCTTCGAATCTTT
CGAAGCGAAATGAGTTACAAGAACAAGCTGTTAACCAATGACAAAGCAGAGCTACTGAAG
AACATGAGATCTCTCTTCAAGGACAACCTCATCCCTAAACACGAAACACTGACATTGGAG
AAGATCGATCTCAGTGATGAACAACTGACAGAGGAAGACATGGATGCTGTTACATATGTC
GTATCGCACTGCACCAACTTGCATATACTCGATCTACATAACTGCTGTCTTCCAAAGAGA
TCTGTAAGAAGATTGGAACAAGAACTTCATTCCAGTGTCCAGATTGGTTTCATCAATATA
AAAAGGAACAAAGACCTTGGTCTTGCTGACCTTCTCGCAGCTGTGGATATTAAGAAGAAA
TGTAACGTCAAGAAAATGCTATATGACAGAAATCTAACTAAGGAAGAGAAAGAAGAATTT
GATCTTTATTTGAAAAGGAATGAGAATATTGCTGACAAAGTAGAATACGATACTAAACCA
CTGGTAAAGCGGCCACATGAAATGACAATCAAACAAAGCAAGGATGAAAGATTGCGGGAA
GGTTCAATTTCTCCATCACAAGTGTTTTTAATAGGTCCAGCAGGTGGCACCATTGAGTTA
GATGATTGCAAAGTAATTTTTTCTAAAGGAGCATTTGATGGTATTGCGAGAGTACAAGCA
GCAGAACAAGTCGACAGTTCAAAATGGCCAGACGGCTACATTGGAATCGGTCCAATGCTT
TATGTTAAATGCGACAGAGAAATTCTAAAACCAGTTAAAGTAGAAATGACAATATGGTGC
GTAAGCGATGGGTCAGAGGAGAGTAATCATACAGAAGTCGAAATACTTCATAAATCAACT
GATAGCAAATGCTGGAATACAATAGCCACGTCTAAATTACAACCCTTGTGCCATGTTGAA
TTTGAATGCATGGATTTTAGTCCAATACTTGCAGCTATTAAAAAATCGCTCCTTAATCTA
ATCTTGCGTCGTCAAATCTTTTTGATTTCTGGGTTGCTTTATATCAATAACAAACATGAG
TTCCACTGTGGAATTTTTTGCGATAATGCCTGTTTGAAAGAACAAACTGAAAGTGATTTG
ATGAAACTGGGGGGAAAACTTAAGATAATATTCAGACGCAGACACAAATTTGCCCTCGGG
GACAAATTTAAACTGAAGTTATTTTGCGAACAGAATAATTTTTCATTCGCGTATCCTCCT
GACAATGATGCTCATTGTCTTGAGATAAATGAAGAGTTTGTTGAAAATCCACAAGCTTTA
TTTTATACCTACTTGAGGGAAATTCAACCACACGAGGAGTGGGATTTGGATATGCTGGCT
GAAGTTTATAACAACGAAAGTAGATTGGAATACTGCCCTTTCATACATACCTGGACACCT
CGAAATGCAGTCAATAAAGGAGCTTCTACATCACAGCAAGATCCACCAGTGCCTTCAGTC
ACCAGTCCAGATCATACTGATCCAGCATCAACTCCTACTTCGCCAGATCAACCTTCAACA
TCAGGGATTCATGCTCCTACTTCTTCCACTGCTGCAGATAGAGAAATCAAGACTGAAGTT
CATGTTAATCTGAGTATTCCCAATCTATCTATTCAAGGTGGTGATACAGCAGATATAATG
TTGAAAGACCAAGCAAAAGCAAATGTGAAGCAAAAAGATGGACAGCATCATATCTCCTAA
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[46-83] 3.04E-13 - T[207-295] 3.04E-13 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[191-343] 1.2E-16 |
| SMART |
TPR_repeat (IPR019734) - T[219-252] 0.013 - T[264-297] 0.01 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[219-297] 12.124 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[219-252] 7.877 - T[264-297] 9.175 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[352-497] 1.2E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|
