- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S37.g15279.01.t
Possible name(s)
ERG; FEV; FLI1
Gene model
Location
S37 [253,760 / 265,372]
Amino acid sequence
Length: 810
>Harore.CG.MTP2014.S37.g15279.01.p
MLSMSAVPEDFSVKARRTPNDLPPGLVPSNVTVPKVEPGLRSAVPGTYDLSNNHSPENQA
ADLRFHIYGASDSKRHASPPRLYRNPDPFLGNGNHTIKAECFPGSNNNNHHNSNGARDKD
SPICQDDFSNQLCTEKYTPSGPGTPPISQSFITHSLLSHGSGSAVAEESPSSFSSFLHEH
ETHMGLPLTNGMTTSNSSTVAGTPPKLYSDATLDSGQPSTSQRPFVKDTGRSTLSPPEIL
AGQSSTRQQHNNSSSSSRSESMGPISPYNATATQSLPTLTSSASPSLDYSMNSSAFRPPN
ATNNQQYQHQQYSSRAPTQFSHQAHHSNPNNAASSAFNKRKVEYNSISSMPSSSSRGSLP
SPDELQGSSRPSSSGMPPPLQLSENLEAAGSLTSPSFISTSSYSYQGAARSSYSSSGTGS
RSNVPVAPYDCSSSSFSSAPPPLVQNTDNSIQTATNSESTDPQKRVIVPADPMVWTHEHV
QEWLGWAITEYSLQGVNVSAFRSVNGRHLCQLSKEQFYRLTSQANADVLLGHLNYLRRPT
NLLPNLSSDDVEDVIHGGGAFRYTGSSRSSSFSDSPYDMMGGPPVRSPRYPGYVGPNDTK
GVNPYDLFGPTSARLCNPGSGQIQLWQFLLELLSDPANSTCITWEGTNGEFKMVDPDEVA
RRWGDRKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFQGLAASLQPQPDHAPY
SYARDMHYMPAGYPYPQPMPPQHMHPRGMGNKAGFRAHAPSAMAAYPPHTTGLPQEPHPY
PTWSSPTTPTIGYPGVPHSNQSLPQTSYYN
Nucleotide sequence
Length: 4,219
>Harore.CG.MTP2014.S37.g15279.01.t
AGGAAAGTATATTGAATATCCGTATATGAATACGAAGAATCTGCTTTCAACTATTCGAGA
AAAACAAGGTGGCAGCCGGATTTACTAGAGAATCAGCTTCTAAGAAGAATACCTATTTAG
AAGAATAAAGTTCCATGCGTCATTTGCTATTGACCTCAACATATTAAACACCACTCCACC
ACTCTTCTACGTAACTTCAAAGGTCAAAGGTCTTGCATTCCTGATAAACCCGGTGAATAA
GGGAAAAAATGCTGAGTATGAGCGCTGTTCCTGAGGACTTCTCTGTCAAAGCACGACGAA
CACCAAACGATCTTCCACCTGGTCTCGTACCCAGTAATGTGACTGTCCCCAAGGTGGAGC
CAGGACTTAGATCGGCGGTGCCGGGTACATATGACTTGTCGAATAACCACTCGCCAGAGA
ACCAAGCAGCAGATCTAAGATTTCATATCTACGGAGCGAGCGATTCCAAAAGACACGCCA
GTCCTCCAAGACTTTATCGAAATCCTGACCCTTTTCTGGGTAATGGAAATCATACTATAA
AAGCCGAGTGCTTTCCTGGTAGCAATAACAACAATCATCATAACAGCAACGGAGCGAGAG
ATAAAGATTCTCCGATCTGCCAAGATGATTTCAGCAATCAATTGTGTACTGAAAAATATA
CGCCATCAGGACCAGGAACCCCTCCGATCAGTCAATCCTTTATAACACATTCCCTACTCA
GTCACGGATCAGGTTCGGCCGTTGCTGAAGAAAGTCCGTCTTCATTTTCATCTTTCCTTC
ATGAACATGAAACCCATATGGGATTACCGCTGACCAATGGAATGACGACCTCCAATAGCT
CGACTGTGGCAGGCACCCCTCCGAAATTGTACAGCGACGCAACGTTGGATAGTGGTCAGC
CGTCCACCAGTCAAAGGCCATTTGTAAAAGATACTGGACGTAGCACTCTATCGCCGCCCG
AGATACTTGCTGGACAATCATCTACTCGGCAGCAACATAATAATAGTTCGTCGTCTTCTA
GATCCGAAAGCATGGGCCCCATTTCGCCTTATAATGCAACGGCTACACAGTCTCTTCCAA
CTCTAACTTCCTCTGCCTCTCCATCTCTAGATTACAGTATGAACTCGTCAGCTTTCCGGC
CACCTAATGCAACAAATAATCAACAATATCAACACCAACAATACTCTTCCCGAGCACCGA
CACAGTTTTCACATCAGGCACATCATTCCAATCCTAATAATGCCGCGTCTTCTGCTTTCA
ATAAAAGAAAGGTGGAATATAACTCGATATCTAGTATGCCTTCCTCATCTTCCAGAGGTT
CTCTCCCATCTCCCGATGAACTGCAAGGTAGTTCCAGGCCATCCTCTTCCGGTATGCCGC
CTCCTCTTCAACTCAGTGAAAATCTCGAAGCAGCAGGCAGTTTGACTTCCCCTTCTTTCA
TTTCTACTTCGTCCTACTCCTATCAAGGAGCAGCAAGATCAAGTTATTCTTCTTCTGGTA
CAGGAAGTCGATCGAATGTACCAGTTGCCCCCTACGATTGCAGTTCAAGCTCTTTCTCAA
GTGCTCCGCCTCCATTGGTTCAAAACACAGACAACTCAATTCAAACTGCGACAAATTCCG
AATCAACCGATCCGCAGAAACGCGTTATTGTTCCAGCAGATCCCATGGTTTGGACGCATG
AGCACGTCCAGGAGTGGCTGGGATGGGCAATAACAGAATACAGCTTACAAGGCGTTAACG
TATCGGCATTCCGGTCAGTAAACGGTCGTCATCTATGTCAACTGTCAAAAGAACAGTTCT
ACCGTTTAACCAGTCAAGCGAACGCCGATGTTCTTCTGGGTCATCTTAACTATTTAAGAC
GTCCAACAAATTTGCTGCCAAATTTGAGCTCCGATGATGTCGAAGATGTTATCCACGGTG
GAGGTGCTTTCCGTTACACTGGTTCCTCTAGAAGTTCTTCCTTCAGCGATTCTCCTTATG
ATATGATGGGAGGTCCTCCAGTTAGGTCTCCAAGGTATCCTGGATACGTTGGGCCAAATG
ATACTAAAGGTGTCAATCCTTACGATTTGTTTGGACCTACCAGTGCTCGGTTGTGCAACC
CAGGAAGCGGGCAAATTCAGCTGTGGCAATTTCTGCTGGAACTGTTAAGCGACCCGGCCA
ACTCTACTTGCATTACGTGGGAGGGCACCAACGGTGAATTCAAAATGGTGGATCCAGACG
AAGTAGCGCGAAGATGGGGCGACAGAAAAAGCAAACCTAATATGAACTACGACAAACTGA
GCAGAGCATTGAGGTACTATTATGATAAAAACATAATGACTAAAGTGCACGGTAAGAGGT
ACGCGTACAAGTTTGACTTCCAAGGATTAGCAGCTTCGCTTCAACCACAACCGGACCATG
CACCTTATTCATACGCAAGAGATATGCATTACATGCCAGCAGGCTATCCGTATCCGCAGC
CAATGCCGCCGCAGCACATGCATCCACGCGGCATGGGGAATAAAGCTGGATTTCGTGCAC
ATGCTCCGTCAGCGATGGCAGCTTACCCACCTCACACAACAGGACTCCCTCAGGAACCTC
ATCCTTACCCCACGTGGTCATCCCCAACAACGCCCACTATTGGTTATCCCGGAGTTCCGC
ATTCCAATCAATCGCTCCCACAAACCTCATACTACAATTGAGAAACATTTGTGTTTAACG
AATTTCAAAAATATTTCTGGAACAAATAGTTATCGCTAGAAATACGACGGCGACGCCAAT
CAGCAGTTAAGGTGCTTTTCCCGTCGAAGTTGCGTGACAAGTGCTGCTCTATTTCGCTTA
CCTACCAGAGACAAGTAGTGTTAGTGGATAGTGGATAGTTCCAAAACGGTGCCTACTTTT
TCATTTCTGCCTTCGGAAATGCTTATATAGACGAAGTAAATTATATGTGTCGTAATGTAT
TTTCATAGTGAGCGTGTAATTCGGTTCGAAGAGCGTGGTTTTGTGTAACACGTGAGAGTT
TTTTTAATCTCCAATAGTGGATGTACGAACGAAATGTGATGATTCCTTTTTATGCAATCT
ATCAAGTGCAAGTTCACGATGTATACTGACTTTATTTCTATATATGTTAATCATTTTTTT
AGTCATTTTGGTGCCTTATTCGGTATTTTTACTAATCAGCCAGGTAATTTTCATCTTTCG
TCTTGTTCAAAAGCTAAATCCGTTAGGGTATGACGATGTCTGCAGAAAGCATTTTAATCT
AACGCGTGACTGCTGCTGGAAACTTGAAATGTGCAAGTTATTGGTAGCATAAGATCTACA
ATCCCTCGAATAATATGATCTAATTTACGTCATACATTGCCAACCTGACTTGCTAAATTA
CCGTGACTGTAGTCTAAAGTGCGTGTTTATTCACCTGCCAATATAACATTGTACTCTGAA
TTATGTCCAAAGGTGCCTTTTATTTTATTTTATCAAAGTGCATTTTGTTCTTTATTTTAT
TCGTGTTACAGCAGTTCTCCTTGATCATCAAAATCCAACTGATCCCTAAAATTAGTCACA
AACTTCCGTTTCTTACGAAATACAATACTTCGTGAATCAGTTATTTTTATCACTGTATTG
CTTAAATCATCGCTTTAATTTGTGCTGAACTGACATCAAAGCACGACCGTAATGAAAAAT
TCAAGTTTTTTCTTAATAAGTTCGAGCAATGTGTTTACGCAATGCCCGTAAATGAGCTGC
GTAATCAGGTTGTCTTCAAAATCGAAAATATGTTTTTAATAAGTGTTTTTCACCCAGCAA
CAAGTAATTTTCTTCTCTACCTAGTTTCAGTAACTCACCAATTGTCATCAGTGTCCGTAG
CTGGGGAAACGTACCGTGTATTTTATTTCCTTCAATCATTAATTCTGATTCCATGGTGTT
GTGTTTTAGGAAAAGGCTTCCATGTACCATACTACTGGTTACTTACTGTATGTCTTCACC
TCGCACAGTGAAGACATATCTTGTATCGATGTATGTTTACTCTTGTTTTTGTTTGTTTTC
TTGTATCTTGTTGAAGGTTCTACTAATTTTACAGGTTTTTAATGTTCTTTTGGAGAATAA
TTTGTGCTTTTTCTGATTGGCCAAAAGAGAATAAAATACCAATCGAAGAGCGTTTTCGCT
ACCAAACATTCGTCTGTGCAATAGTGTTGACGCAGCTGTCAAAAACAAGGACTAGATTTC
GGTTTCAGCAAATAAACAG
| SUPERFAMILY |
SAM/pointed_sf (IPR013761) - T[444-538] 5.5E-24 |
| ProSiteProfiles |
Pointed_dom (IPR003118) - T[454-540] 39.503 |
| SMART |
Pointed_dom (IPR003118) - T[456-540] 2.7E-21 |
| Pfam |
Pointed_dom (IPR003118) - T[458-537] 3.5E-22 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[599-716] 9.9E-48 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[620-740] 7.08E-49 |
| SMART |
Ets_dom (IPR000418) - T[622-707] 3.2E-58 |
| ProSiteProfiles |
Ets_dom (IPR000418) - T[623-703] 47.301 |
| PRINTS |
Ets_dom (IPR000418) - T[623-636] 8.6E-30 - T[647-665] 8.6E-30 - T[666-684] 8.6E-30 - T[685-703] 8.6E-30 |
| Pfam |
Ets_dom (IPR000418) - T[624-702] 9.8E-36 |
| ProSitePatterns |
Ets_dom (IPR000418) - T[625-633] . - T[669-684] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FLI1_HUMAN | 53.922 % | 315 | 2.49E-99 |
| ERG_HUMAN | 49.171 % | 327 | 1.38E-103 |
| FEV_HUMAN | 77.778 % | 184 | 4.53E-53 |
