- Transcript 'KH2012:KH.C9.362.v6....' >
- Transcript 'KH2012:KH.L24.2.v2.B...' >
- Transcript 'KH2012:KH.C6.80.v2.A...' >
- Transcript 'KH2012:KH.C11.30.v3....' >
- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S37.g06200.01.t
Possible name(s)
TOMM70; TTC1; UNC45A
Gene model
Location
S37 [225,938 / 231,663]
Amino acid sequence
Length: 581
>Harore.CG.MTP2014.S37.g06200.01.p
MPESEGSWPAWKIALLVGVPVVVGGVGYYYLTKKASRSQAFPDITKDARKDPEGSSSPVR
KDDVVEEDPFKIASNHKNEGNTCFKAGKYEEAIENYTKAINVCPNSKRQELSTFHQNKAA
AYEKLENWEQVIVECTKAINLNARYIKALSRRARALETRGRKSECLEDMTAVCIMEQFQN
PTSMVFADRVLKDMGKAMASERYKTREAVIPSVLFVRQYFASFTEDIVSCALTDEQRKDT
DSYYIQARMALEEGELITAINSCTAEIGQSSDDKSGEEGQKIAVPSGDELSARTPGKHCD
EALLFRGTLYLLMGDTANAKSDLENIINNKNANVKLRANALIKQGSLNMQEQKAEESERD
FNRAVEIDPENTDVLHHRGQLKILLDKTEEALSDFEKCMTLKPDFALAHAQHCYSVYRQS
FARRDIVETKQATAKFEELIKRFPNCSECYGLYAQALTDQGDFQRADEMFAKAIEVEPDN
ATQYVHRGLLCLQWKQNMEESIQMINKGLEIDKKCDFAHETMGTIEVQRGNLEKACEHFE
MAISLAKSEMEMAHLFSLKAAAVAQGNLARKYGIKTPTLAT
Nucleotide sequence
Length: 2,006
>Harore.CG.MTP2014.S37.g06200.01.t
CCGTGAACATGATTGCAATTGCCGTCCGTCCTTGTTTTGAATAGCTAATTTAATAGCAAA
ATGCCAGAATCTGAAGGATCATGGCCTGCATGGAAGATTGCTCTGTTAGTTGGTGTCCCT
GTAGTTGTGGGAGGAGTGGGTTACTATTATTTAACAAAAAAAGCAAGCAGAAGCCAAGCA
TTCCCAGACATAACAAAAGATGCCAGGAAAGATCCAGAAGGAAGTTCGTCTCCCGTAAGA
AAAGATGATGTTGTTGAGGAGGATCCATTTAAAATTGCAAGCAATCACAAGAATGAAGGC
AACACGTGTTTCAAAGCCGGAAAATATGAAGAAGCAATTGAAAACTACACAAAAGCTATA
AACGTCTGCCCTAACAGTAAGAGGCAAGAACTGTCAACATTTCATCAGAACAAAGCAGCA
GCTTACGAAAAGCTGGAAAATTGGGAACAGGTTATCGTAGAATGCACGAAAGCCATAAAT
CTAAACGCAAGATACATAAAAGCACTCTCAAGACGAGCTCGAGCACTGGAAACTCGGGGC
CGGAAAAGCGAATGTCTTGAAGACATGACCGCTGTGTGTATAATGGAGCAATTCCAAAAT
CCCACCAGCATGGTGTTTGCAGATCGCGTTCTCAAAGATATGGGAAAGGCGATGGCGAGC
GAACGTTATAAGACTCGTGAAGCGGTCATTCCTTCCGTACTTTTTGTGCGTCAATATTTT
GCAAGTTTCACAGAGGACATCGTTAGTTGTGCACTCACAGATGAGCAGAGAAAAGATACT
GACAGTTACTACATTCAAGCTAGAATGGCTCTTGAAGAAGGTGAACTTATAACTGCAATC
AACAGTTGTACGGCTGAAATTGGACAGAGTTCCGATGACAAATCTGGAGAAGAAGGCCAG
AAAATAGCTGTTCCTTCTGGAGACGAATTGTCAGCAAGAACACCGGGCAAGCATTGTGAT
GAGGCCCTCTTATTTCGTGGTACCTTGTATTTACTTATGGGCGATACTGCAAATGCAAAA
TCAGACTTAGAAAACATTATAAATAATAAAAATGCAAATGTCAAGCTTCGGGCAAATGCC
TTAATCAAACAAGGAAGTTTGAACATGCAAGAGCAGAAGGCTGAAGAATCGGAAAGGGAT
TTTAATCGTGCAGTTGAAATCGATCCCGAAAATACAGATGTTTTACATCACAGAGGACAA
TTGAAGATTCTGCTGGACAAAACAGAAGAAGCATTGAGCGATTTTGAAAAATGCATGACA
CTGAAGCCAGATTTTGCCCTAGCCCACGCACAACATTGTTATTCGGTTTACAGGCAGAGC
TTTGCAAGACGAGATATTGTAGAAACAAAACAGGCCACTGCTAAATTTGAGGAATTAATT
AAAAGATTCCCCAACTGCTCAGAGTGCTATGGATTGTATGCTCAGGCTCTGACAGATCAA
GGGGATTTTCAGAGAGCGGATGAAATGTTTGCTAAAGCGATAGAAGTTGAACCAGACAAT
GCCACTCAATATGTACACAGAGGTTTGTTGTGTCTCCAGTGGAAACAAAACATGGAAGAA
AGTATTCAAATGATTAACAAGGGGCTGGAAATCGATAAAAAATGTGACTTTGCACATGAG
ACCATGGGGACGATTGAAGTGCAGAGAGGCAACCTGGAAAAAGCATGTGAACATTTCGAA
ATGGCGATAAGTCTGGCAAAATCCGAAATGGAGATGGCTCATCTTTTCTCATTGAAAGCA
GCGGCAGTGGCACAGGGGAATTTGGCAAGGAAATACGGAATCAAAACACCAACTCTTGCT
ACTTAAAAAGTTCTTGAAGCTGGCTGATAAAACTTTGAAACTGATCTACAATCATATCTT
CAATAAATCTCTAATTAAGACCATTAAGATTGATGTTAAAAGTATTTTCCAGTGTTATGC
ATGGGTTCATTGTTTTTGGGTGTGAAGACATCTGAAACTGGATGACCTTGAAATAAGCAG
AAAATATAATGTTATGATTGCAGAAA
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[63-180] 1.5E-29 - T[181-575] 6.4E-71 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[72-172] 4.03E-23 - T[239-275] 3.6E-27 - T[302-475] 3.6E-27 - T[436-562] 4.55E-19 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[73-106] 10.945 - T[112-145] 5.192 - T[300-333] 5.605 - T[338-371] 10.355 - T[372-405] 9.47 - T[447-480] 10.856 - T[516-549] 8.054 |
| SMART |
TPR_repeat (IPR019734) - T[73-106] 1.3E-4 - T[112-145] 0.62 - T[146-179] 260.0 - T[300-333] 45.0 - T[338-371] 0.082 - T[372-405] 0.068 - T[447-480] 0.48 - T[481-515] 130.0 - T[516-549] 31.0 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[73-145] 12.36 - T[300-549] 35.165 |
| Pfam |
TPR_1 (IPR001440) - T[76-105] 9.5E-8 |
| Pfam |
TPR_repeat (IPR019734) - T[338-371] 0.021 - T[373-404] 0.0048 - T[448-480] 7.3E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TOM70_HUMAN | 48.744 % | 571 | 0 |