- Clone 'cien107460' >
- Clone 'cima859189' >
- Clone 'cima842m04' >
- Clone 'cima829795' >
- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S37.g05896.01.t
Possible name(s)
GJA10; GJA8; GJC1
Gene model
Location
S37 [88,115 / 96,141]
Amino acid sequence
Length: 354
>Harore.CG.MTP2014.S37.g05896.01.p
MAWHIVEKFIEQVSQHSTLIGKFWTTFFFVLRLLIVISIADSVFGDEQGSFVCNTLTPGC
QNVCYNDFSPISLIRLWALQVLCVSIPSLIFMVYTAHKLTKIEQARKMKKEAEEKKKKQL
KEAKRLREEARKEVMRRRGTDGGPPEYNVIHREGGFVTDVNATNEKGAKDGKEKEDDSKD
KEEKKDEEVVATKLGTDTPPRLFLAYVTQVVFRLIVEVTFMVVQFNTYIYKFSVPELFKC
SRWPCPNVVDCFISRPKEKTIFLWIMFATGVIMILLNLIELYHLGIKKVYDAWKRRGEDI
TKEYKVSNMPHFGRGYGGGRYRGGYPQAVGIRVGYARSSLSGEGGNDYDGDEFI
Nucleotide sequence
Length: 3,693
>Harore.CG.MTP2014.S37.g05896.01.t
AGTACTTTTGTTATAACATTTCAATAATCACCAGCAAGCATCGTTAAATCATCACGGAAA
TTGGAAGATAAATTGGCTTTGCTTCGTCATTGATTTGGCTTCATATCATTGGATTGGACT
TGTAACAAATAGCTTTCATCATGGCTTGGCATATAGTAGAAAAATTTATCGAGCAAGTTA
GCCAGCACTCAACCTTGATCGGGAAGTTCTGGACGACGTTCTTCTTCGTTCTTCGCTTGC
TTATAGTAATTTCAATAGCGGATTCCGTGTTCGGCGACGAGCAAGGCTCTTTCGTATGCA
ATACCTTGACGCCTGGTTGCCAAAACGTCTGTTACAATGATTTCAGTCCGATATCGCTTA
TTCGACTCTGGGCCCTACAGGTTCTTTGCGTCTCCATTCCATCCCTCATATTTATGGTAT
ATACGGCACACAAACTAACGAAAATCGAGCAAGCACGCAAAATGAAAAAAGAAGCAGAGG
AGAAAAAGAAGAAGCAGCTGAAAGAGGCAAAGAGGTTGAGGGAAGAAGCAAGAAAAGAAG
TCATGCGAAGACGAGGAACTGATGGAGGTCCTCCAGAATACAACGTTATTCACAGGGAAG
GTGGATTTGTAACCGATGTTAACGCAACGAATGAAAAAGGTGCCAAGGATGGAAAAGAAA
AGGAAGATGATAGCAAGGACAAAGAGGAAAAGAAAGACGAAGAAGTCGTTGCCACAAAAC
TTGGCACAGATACTCCTCCCAGATTGTTTCTTGCCTACGTCACCCAGGTCGTTTTTCGAC
TTATCGTCGAAGTTACCTTCATGGTGGTACAGTTCAATACCTACATATACAAATTCAGCG
TCCCAGAACTATTCAAATGTTCGCGTTGGCCCTGTCCGAACGTGGTCGATTGTTTCATTT
CGAGACCGAAAGAGAAAACCATCTTCCTGTGGATTATGTTCGCCACTGGAGTCATCATGA
TTTTGCTGAATTTAATCGAACTTTACCATCTGGGTATAAAGAAGGTGTACGATGCATGGA
AGAGAAGAGGTGAAGATATCACCAAGGAATACAAAGTCTCCAATATGCCCCACTTCGGCA
GAGGTTACGGAGGAGGTAGATATAGAGGAGGATACCCTCAAGCAGTCGGTATCCGTGTGG
GATACGCCAGAAGTAGTTTATCGGGAGAAGGGGGCAATGACTACGATGGTGATGAATTCA
TTTAGGAGTAAAAATCAATAGAAAACTACTGACCGAGTTGCCTACGCACAGTCATCCTTC
AAAATGTAACATAATTTTATGGAAATAGTTTTATATTGTTACCAGCAGGGCCCAAACTCT
CTGAGTGCTGAGAACTATTACAAATACTGAATGCTTAAATTTGGCGGTCAGCCATAAAGC
GAAAATTGTTCAGACACGTTGCGCGTTAGGTCAATAGCCTATTATTTAGTTATGCAATAG
TGTTTAATTCAATAATACCATTGTTTATTTGTAATTTTTTTTTGAAAACTGGGCGAATGG
GACGCATCAAAATGATTTTATATCAACATCTACTACGTAGATCCAAACAAAAGCGTGTAA
CTTAAATTAAAATATATCCATAAATATTTCGGAGTTCCGGATCAAAGTAATTGAGTTAAT
CTTACCTTGCATTACCTTGGAAATTACGTGAAAGTTCCTCTGAAGGTTTTTTCAAAACGT
GCACTTGTTTTATGTACATTCTAACATCTTCATACTCTCTGATTAACAATTGCAAGAAAA
CCAGAAAAACTCTTCAACATAATCGCTGTCATATTCTCATCAAACTTATTTTAGTATTTG
CCCTATGCATGTTACTAATCATTGAGTTATCAAAATGTATTTCCATCGAAATTGTATGAT
TACAATAACCCCTCTCTGATGTACATAGGAGTGATGCTGTAAAATTTTTAAGTTGGGACC
CCATTTACCATAGATCAAACTACTATTTTCATTGTATTTTTTATATTATATACGTATATA
ATTTTTAAAAATTATCACGAATAAGAGTCATACTGTAAATAATTCAAAAAATGGAATACC
ATATACAGGAGATCAAACTACTATTTCTAGTTGTATTTTCATATTATATACGTATGAATT
TCTCAAAAAAATATTGACCAAGTACGAAATTACAAGTACAAATTATTACTATCCATCTCA
ATCTATTTGCATAGATCTAATACAATTTTTTTTGTACGTACGCAAAACATTTATTTCTGG
ACAAAGTAAAGGGAATAATTTGTTCAATAATAGTTGTCAGAATGGAACTCGAATAATTTA
GTGTCCTCAGCACCATTTTTGCCTTCTTTCTCTACACAATATATATCTTAGCTCTGTTTT
GCGTTACTTAGGACGCGAGGGATGACATAGAACAAAAAGTAATGTGTAATATACTGAGTG
ATAGTCTATGATTTCCTCTAATTTTGTATATTATATAATTCTTGTCAGCTAGTAATTTTC
TGCTACCCTAACGCCATTCATTGTGTATAATCATAATATATATTACCTGCTGAATTTATA
TTGTTAGGCGATATCACTATATTTTATAATTCTGATATATAATGTTCATATTATTGACAG
CTAACGGTTATACAAATAGCCCAACTGTATTGCTGCAATACTTCATTACTGCATCACTAC
ATTATCAAACTGCATTATTCAAGGCCGAGAAACGCAAAATGCTCCAATAACCATCCAAAC
GGGATGGGATATGAATTTTCTATAGCGAATTTTAGAGTATACCTAAATTACCAGCTTTAT
TTGAAGCTAATCACACCACTGCATAATCAACCATCTTGAATAATCGAACTTCTGAAGTTC
GAATTGAATTCAAAAAAATTATTAGTATTGAAATTATCGTAACAAATGTATGTATTCAAC
AAAATTTGTGCTGCACCGTATTATTCAAATCATATTTAGTACTGTTCAAGTTTATTTTTA
CGGTATATAGTTAAAATTGATCAGGCGAAAAAGCCACATCACCATTGTGCTGAACATTCG
CTCGTAGTCTCCATTGTGCCAATGATATACTGAATCGCTGGGTAGTGTCCATTGTGCCAA
AAAGTTTATATGGCCATGTTTGCAATTTTTTCTATTTTTTACATTTCTGTTTATGGCAAG
AAAGTTGATTGATTTTAATTTGTGGATGTCATATGTGTGCCAAAATGTATCGGCTCTAAA
GGCAAATATACCTTTGACCTGTTCACTGCTTCCCATCGTTATTTAAATTTCCCACTATTA
TTTTACTCAATGCTTCAATCCCGGCAGTTTCAGTTTTCATGAAATTCATTACTTACTCGA
AAGAGTAGATAATAGTAGACTTCACTTGACCTTACTTTAGGCAATAGTTTACAGAAACTC
GACTGGAGGTTCTCATATCGTACAATCTGTCAGTTCTTTTTCTAAAAGATATGGCGGTAC
TGGATAATCCACCAACGATAAGTAACAGAAAAACACCACAAAATAATTCTGTGCTTTGTG
AATGTGCTTTATCTTTTATTTGAACCACCCTTTATTTTATCTACCTTTCTTCATCCTCTC
TCCCATCTTTGTGGTGGGGAATGAAGGTAATAAATCAATAAACGGAAATTTGAATATAGA
GTGGCCACCGCTTATTGTCATCGCCTCCGGACAGTCTCTTTTTAATAACAATAACTGGCT
GATAACATTAAGGGCGGGATATTAATATGATAT
| PANTHER |
Connexin (IPR000500) - T[1-352] 7.8E-112 |
| Gene3D |
Connexin_N_sf (IPR038359) - T[1-140] 2.6E-46 - T[149-297] 5.1E-38 |
| Pfam |
Connexin_N (IPR013092) - T[3-285] 1.5E-85 |
| PRINTS |
Connexin (IPR000500) - T[20-44] 1.0E-50 - T[51-73] 1.0E-50 - T[76-96] 1.0E-50 - T[202-228] 1.0E-50 - T[240-260] 1.0E-50 - T[261-284] 1.0E-50 |
| SMART |
Connexin_N (IPR013092) - T[42-75] 7.8E-13 |
| SMART |
Connexin_CCC (IPR019570) - T[216-284] 1.7E-38 |
| ProSitePatterns |
Connexin_CS (IPR017990) - T[240-256] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CXG1_HUMAN | 31.988 % | 184 | 1.11E-54 |
| CXA10_HUMAN | 34.602 % | 184 | 1.25E-53 |
| CXA8_HUMAN | 37.543 % | 202 | 1.86E-61 |